##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631163.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1027363 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31794701580649 31.0 31.0 34.0 28.0 34.0 2 31.304681013429526 31.0 31.0 34.0 28.0 34.0 3 30.71395894148417 31.0 31.0 34.0 26.0 34.0 4 34.91110444896302 37.0 35.0 37.0 32.0 37.0 5 35.142592248309505 37.0 35.0 37.0 32.0 37.0 6 35.358664853610655 37.0 35.0 37.0 33.0 37.0 7 35.37358265773636 37.0 35.0 37.0 33.0 37.0 8 35.396002192019765 37.0 35.0 37.0 33.0 37.0 9 37.13857614105238 39.0 37.0 39.0 33.0 39.0 10 36.95003810727075 39.0 37.0 39.0 33.0 39.0 11 37.02985118210409 39.0 37.0 39.0 33.0 39.0 12 36.96197546534185 39.0 37.0 39.0 33.0 39.0 13 37.03395975911143 39.0 37.0 39.0 33.0 39.0 14 38.14343323635366 40.0 37.0 41.0 33.0 41.0 15 38.14638058797134 40.0 37.0 41.0 33.0 41.0 16 38.14692567281477 40.0 37.0 41.0 33.0 41.0 17 38.148590128318816 40.0 37.0 41.0 33.0 41.0 18 38.17171729953288 40.0 38.0 41.0 33.0 41.0 19 38.20478058875003 40.0 38.0 41.0 33.0 41.0 20 38.1972954058108 40.0 38.0 41.0 33.0 41.0 21 38.15128732492799 40.0 37.0 41.0 33.0 41.0 22 38.10109377114029 40.0 37.0 41.0 33.0 41.0 23 38.070048269209614 40.0 37.0 41.0 33.0 41.0 24 38.04562846822399 40.0 37.0 41.0 33.0 41.0 25 38.00682426756658 40.0 37.0 41.0 33.0 41.0 26 37.89954086335599 40.0 37.0 41.0 33.0 41.0 27 37.834698154401124 40.0 37.0 41.0 33.0 41.0 28 37.795908554230586 40.0 37.0 41.0 33.0 41.0 29 37.728715166888435 40.0 37.0 41.0 33.0 41.0 30 37.632202055164534 39.0 37.0 41.0 32.0 41.0 31 37.60986817707081 39.0 37.0 41.0 32.0 41.0 32 37.514909530516476 39.0 37.0 41.0 32.0 41.0 33 37.507010667115715 39.0 37.0 41.0 32.0 41.0 34 37.42820113241376 39.0 36.0 41.0 32.0 41.0 35 37.37125144666491 39.0 36.0 41.0 32.0 41.0 36 37.34908693421897 39.0 36.0 41.0 32.0 41.0 37 37.28406317922682 39.0 36.0 41.0 31.0 41.0 38 37.23580857009645 39.0 36.0 41.0 31.0 41.0 39 37.1734323700581 39.0 36.0 40.0 31.0 41.0 40 37.1083667603369 39.0 36.0 40.0 31.0 41.0 41 37.037969052808016 39.0 36.0 40.0 31.0 41.0 42 36.973966358531506 39.0 36.0 40.0 31.0 41.0 43 36.315530148545356 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 6.0 11 4.0 12 10.0 13 4.0 14 5.0 15 4.0 16 9.0 17 11.0 18 13.0 19 65.0 20 81.0 21 221.0 22 439.0 23 798.0 24 1328.0 25 2396.0 26 3914.0 27 6137.0 28 9191.0 29 13134.0 30 17736.0 31 24064.0 32 31322.0 33 40963.0 34 53864.0 35 73158.0 36 102674.0 37 152301.0 38 258452.0 39 235054.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.89057421768158 21.89819956529484 15.079869530049262 23.13135668697432 2 14.415644713699052 23.226551861416073 40.200883232119516 22.156920192765362 3 15.393487988179446 28.53295281219978 33.50938275955042 22.564176440070355 4 12.00773241785036 18.858086187647405 40.34523337904908 28.78894801545315 5 12.3648603268757 38.68691007949479 35.98406794871919 12.964161644910318 6 27.081761753148598 41.46119725939128 18.025079742992496 13.431961244467633 7 24.849444646147468 33.186906672714514 23.950151991068395 18.013496690069626 8 24.586149199455303 35.48258989276429 22.088492577599155 17.84276833018125 9 25.24589653316306 15.330121875130795 20.782041011794274 38.64194057991187 10 14.546367739542887 28.988098656463197 34.336159663137565 22.129373940856347 11 31.697365001464917 24.365973857341565 25.35238275079013 18.58427839040339 12 21.354477433974164 26.764833851326163 30.911664134293332 20.96902458040634 13 28.108662663537622 22.314994797359844 27.247233937761045 22.329108601341492 14 21.582245029264243 22.08021896836853 28.672338793590967 27.665197208776256 15 23.108677264024497 29.35515489656528 24.680857691001133 22.85531014840908 16 22.41213670338527 28.887160623849606 25.29203407169618 23.40866860106895 17 21.31456943650881 29.08845266960169 26.906750583776134 22.690227310113368 18 22.83516147651804 27.485124537286236 27.796893600411927 21.882820385783795 19 24.007385899628467 27.09772495213474 28.00509654328606 20.88979260495073 20 23.52410978398093 26.50708658964748 27.8571449429267 22.111658683444897 21 23.235020143805063 27.036792253565682 27.84653525579566 21.88165234683359 22 21.97344074100391 28.46880800651766 27.889947370111635 21.667803882366798 23 22.189041263896016 27.194866858160164 28.410503395586566 22.205588482357257 24 22.50733187782702 27.855976903976494 27.609326012324757 22.02736520587173 25 22.109614615282037 27.78774396196865 27.744429184231862 22.358212238517446 26 23.102253049798367 27.92596190440964 27.769055338765362 21.20272970702663 27 22.085767153382008 28.20745929140917 27.41007803473553 22.29669552047329 28 21.563945752377688 27.576815594877367 28.806468599706236 22.052770053038703 29 22.87068932792012 27.798061639362132 27.56445384932103 21.766795183396713 30 21.83921359830946 27.673373481427692 28.17154209369035 22.3158708265725 31 23.384431792852187 26.776416904249032 28.194708199536095 21.644443103362686 32 22.160034963299243 27.22095306138142 28.29671693452071 22.322295040798625 33 22.11993229267552 27.508387979711163 28.88015239014837 21.491527337464948 34 22.5416916902789 27.217448944530805 27.99799097300565 22.24286839218465 35 21.72153367407625 27.37104606648283 29.041925784751836 21.865494474689083 36 23.16552182626783 27.242561781960223 27.388079967839996 22.20383642393195 37 22.380015632254615 27.166152567300944 28.259923707589234 22.193908092855203 38 22.33008196713333 26.62924399652314 28.466179918879696 22.574494117463836 39 22.631144006548805 26.750330701027774 28.100291717727817 22.518233574695603 40 21.421639673610983 27.019174332733414 29.675197568921597 21.883988424734003 41 22.226515846881775 26.452286095567 27.96577256529581 23.355425492255417 42 22.209481945524608 26.77992102109965 28.614228855818247 22.396368177557495 43 22.376122169087264 26.040941711936288 29.084851216171888 22.498084902804557 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 19.0 1 28.5 2 38.0 3 132.0 4 226.0 5 226.0 6 292.0 7 358.0 8 387.0 9 416.0 10 676.0 11 936.0 12 936.0 13 1332.0 14 1728.0 15 4216.0 16 6704.0 17 7758.5 18 8813.0 19 8813.0 20 9142.5 21 9472.0 22 11794.5 23 14117.0 24 17742.0 25 21367.0 26 21367.0 27 25961.5 28 30556.0 29 35443.5 30 40331.0 31 45905.0 32 51479.0 33 51479.0 34 55768.5 35 60058.0 36 63571.5 37 67085.0 38 69741.5 39 72398.0 40 72398.0 41 73056.0 42 73714.0 43 73362.0 44 73010.0 45 73009.0 46 73008.0 47 73008.0 48 71649.5 49 70291.0 50 68951.5 51 67612.0 52 71981.5 53 76351.0 54 76351.0 55 66779.5 56 57208.0 57 54144.0 58 51080.0 59 43107.5 60 35135.0 61 35135.0 62 29607.5 63 24080.0 64 19817.5 65 15555.0 66 12838.5 67 10122.0 68 10122.0 69 8106.0 70 6090.0 71 4955.0 72 3820.0 73 2976.0 74 2132.0 75 2132.0 76 1588.0 77 1044.0 78 824.0 79 604.0 80 412.0 81 220.0 82 220.0 83 158.5 84 97.0 85 77.5 86 58.0 87 37.0 88 16.0 89 16.0 90 14.5 91 13.0 92 7.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1027363.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.32000280704408 #Duplication Level Percentage of deduplicated Percentage of total 1 80.58321692983769 44.57863786759263 2 11.901231420358219 13.167523111629956 3 3.250187645669638 5.3940116904559305 4 1.3174288594104304 2.915206728026636 5 0.6437902011802162 1.7807237868218515 6 0.38624585262468736 1.2820272990844106 7 0.2751496375014326 1.065489510325549 8 0.21107291131949338 0.9341243237348272 9 0.14578502460074796 0.7258345173124531 >10 1.0774860369623596 11.735332068135184 >50 0.13182681211890998 5.08216570810128 >100 0.07252035206588632 7.2874672931534965 >500 0.0021173824436469396 0.7950443285036382 >1k 0.0015880368327352045 2.117970759959723 >5k 3.5289707394115655E-4 1.1384410071624227 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGT 6498 0.6324930915362925 No Hit ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATG 5165 0.5027434314842952 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4347 0.42312210971195185 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3843 0.37406447380331975 No Hit TCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT 3798 0.369684327740049 TruSeq Adapter, Index 5 (95% over 21bp) ACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCC 2983 0.29035501570525707 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1497 0.1457128590381394 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1439 0.14006733744547933 No Hit CATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTC 1379 0.1342271426944517 No Hit CTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTTC 1314 0.12790026504750512 Illumina Paired End PCR Primer 2 (95% over 23bp) GTTTTATTGTCTCTGCCTGGACTTCTAACATAGCATATGAGGT 1098 0.10687556394380565 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.946731583675877E-4 0.0 5 0.0 0.0 0.0 1.946731583675877E-4 0.0 6 0.0 0.0 0.0 1.946731583675877E-4 0.0 7 0.0 0.0 0.0 1.946731583675877E-4 0.0 8 0.0 0.0 0.0 1.946731583675877E-4 0.0 9 0.0 0.0 0.0 2.9200973755138154E-4 0.0 10 0.0 0.0 0.0 3.893463167351754E-4 0.0 11 0.0 0.0 0.0 3.893463167351754E-4 0.0 12 0.0 0.0 0.0 4.866828959189692E-4 0.0 13 0.0 0.0 0.0 4.866828959189692E-4 0.0 14 0.0 0.0 0.0 4.866828959189692E-4 0.0 15 0.0 0.0 0.0 4.866828959189692E-4 0.0 16 0.0 0.0 0.0 4.866828959189692E-4 0.0 17 0.0 0.0 0.0 4.866828959189692E-4 0.0 18 0.0 0.0 0.0 5.840194751027631E-4 0.0 19 0.0 0.0 0.0 5.840194751027631E-4 0.0 20 0.0 0.0 0.0 5.840194751027631E-4 0.0 21 0.0 0.0 0.0 0.0011680389502055262 0.0 22 0.0 0.0 0.0 0.0016547218461244954 0.0 23 0.0 0.0 0.0 0.0020440681628596706 0.0 24 0.0 0.0 0.0 0.002725424217146228 0.0 25 0.0 0.0 0.0 0.0028227607963300216 0.0 26 0.0 0.0 0.0 0.0030174339546976095 0.0 27 0.0 0.0 0.0 0.00379612658816796 0.0 28 0.0 0.0 0.0 0.010707023710217324 0.0 29 0.0 0.0 0.0 0.025210174008602607 0.0 30 0.0 0.0 0.0 0.043412114315972056 0.0 31 0.0 0.0 0.0 0.09392979891236107 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATAGG 20 0.001841845 37.0 36 GGTATCA 725 0.0 29.855173 1 GATTACG 65 2.9904186E-9 28.461536 1 CTTATAC 970 0.0 27.273195 1 GACGTAT 35 8.8687515E-4 26.428572 28 CGTCTTC 230 0.0 24.934784 37 TATACAC 1115 0.0 24.556053 3 TTATACA 1070 0.0 24.551403 2 GTATCAA 2090 0.0 24.253588 1 GCCGTCT 645 0.0 23.806202 36 CTAGTAC 80 2.725028E-8 23.125 3 ATGCGCT 40 0.0019310482 23.125 31 CCGTCTT 665 0.0 23.090225 37 TTACGGG 85 5.1793904E-8 21.764706 3 GCAACGC 70 5.101052E-6 21.142859 3 TAACACG 45 0.0038255355 20.555555 4 CGTACTG 45 0.0038255355 20.555555 14 CGTGCGA 65 6.901221E-5 19.923075 32 TGCCGTC 830 0.0 18.72289 35 ATGCCGT 825 0.0 18.612122 34 >>END_MODULE