##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631118.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 647826 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.404533007319866 31.0 31.0 34.0 28.0 34.0 2 31.40279797352993 31.0 31.0 34.0 28.0 34.0 3 30.864005149530893 31.0 31.0 34.0 27.0 34.0 4 35.02836101051825 37.0 35.0 37.0 32.0 37.0 5 35.23510942753147 37.0 35.0 37.0 33.0 37.0 6 35.44534180474387 37.0 35.0 37.0 33.0 37.0 7 35.44360522732956 37.0 35.0 37.0 33.0 37.0 8 35.473171808479435 37.0 35.0 37.0 33.0 37.0 9 37.24960869122264 39.0 37.0 39.0 34.0 39.0 10 37.07918947371671 39.0 37.0 39.0 33.0 39.0 11 37.13886444816973 39.0 37.0 39.0 33.0 39.0 12 37.056354638436865 39.0 37.0 39.0 33.0 39.0 13 37.157429618446926 39.0 37.0 39.0 33.0 39.0 14 38.173893915958914 40.0 37.0 41.0 33.0 41.0 15 38.1868017029264 40.0 37.0 41.0 33.0 41.0 16 38.18205042712086 40.0 38.0 41.0 33.0 41.0 17 38.18509599799946 40.0 38.0 41.0 33.0 41.0 18 38.256244732381845 40.0 38.0 41.0 33.0 41.0 19 38.235685199420836 40.0 38.0 41.0 34.0 41.0 20 38.15927116231828 40.0 37.0 41.0 33.0 41.0 21 38.14614418069049 40.0 37.0 41.0 33.0 41.0 22 38.07324651989886 40.0 37.0 41.0 33.0 41.0 23 38.07282819769506 40.0 37.0 41.0 33.0 41.0 24 38.04329248903255 40.0 37.0 41.0 33.0 41.0 25 37.94010428726232 40.0 37.0 41.0 33.0 41.0 26 37.82766514465304 40.0 37.0 41.0 33.0 41.0 27 37.681133514246106 39.0 37.0 41.0 32.0 41.0 28 37.7031147252503 40.0 37.0 41.0 33.0 41.0 29 37.67346015751143 39.0 37.0 41.0 33.0 41.0 30 37.41159354518034 39.0 36.0 41.0 32.0 41.0 31 37.40357596021154 39.0 36.0 41.0 32.0 41.0 32 37.301301584067325 39.0 36.0 41.0 32.0 41.0 33 37.192422039251284 39.0 36.0 41.0 31.0 41.0 34 37.18217082982159 39.0 36.0 41.0 31.0 41.0 35 37.136897870724546 39.0 36.0 41.0 31.0 41.0 36 37.06483222346741 39.0 36.0 41.0 31.0 41.0 37 37.004516644901564 39.0 35.0 41.0 31.0 41.0 38 36.954021604566655 39.0 35.0 41.0 31.0 41.0 39 36.82584058064974 39.0 35.0 41.0 31.0 41.0 40 36.643597200482844 39.0 35.0 40.0 30.0 41.0 41 36.59168202572913 39.0 35.0 40.0 30.0 41.0 42 36.4869563740881 39.0 35.0 40.0 30.0 41.0 43 35.72983949393819 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 11.0 10 13.0 11 16.0 12 18.0 13 17.0 14 13.0 15 7.0 16 10.0 17 15.0 18 23.0 19 44.0 20 86.0 21 170.0 22 338.0 23 603.0 24 1072.0 25 1751.0 26 2902.0 27 4418.0 28 6439.0 29 9147.0 30 12202.0 31 15688.0 32 20380.0 33 26442.0 34 34480.0 35 46421.0 36 64117.0 37 95526.0 38 154134.0 39 151320.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.90960226974527 22.14329156285793 16.07514980874494 24.87195635865186 2 13.935840796757153 21.41639884783877 41.52457604356725 23.12318431183682 3 13.807874336627426 30.0894067234103 34.22493076844708 21.877788171515192 4 10.532920876902132 19.832331521118324 36.214353854275686 33.420393747703855 5 12.35655870557835 37.97701852040517 34.657299953999996 15.009122820016485 6 26.322345815079974 40.69796519435774 16.514002216644595 16.46568677391769 7 23.794969636908675 32.731011104833705 21.22082164037874 22.253197617878875 8 25.525063828867626 32.78179634654985 22.37298286885676 19.320156955725764 9 23.29946621469345 13.501927986835971 17.937223884191127 45.261381914279454 10 15.650498745033389 27.47080234507414 31.552608262095067 25.3260906477974 11 30.670581298064604 22.63400974953151 24.299117355586223 22.39629159681766 12 20.561076585379407 27.99856751658624 25.09794296616684 26.34241293186751 13 30.80611151759886 19.20639183978414 25.826688030427924 24.160808612189076 14 22.725546674570023 22.61934531803293 25.18947989120535 29.465628116191695 15 25.456526906916366 27.61358759913928 21.94107677061433 24.98880872333003 16 25.94693636871629 24.971674492842215 22.252580168131566 26.828808970309932 17 20.593801421986768 31.094460549592018 22.6935936501468 25.618144378274415 18 25.840117562431885 22.52749966812076 24.780573796050174 26.85180897339718 19 26.679849218771707 25.02107047262691 26.04881557702223 22.250264731579158 20 22.544942623482232 23.861962934491668 27.67162787538629 25.921466566639808 21 26.271406210927005 25.862191390898175 24.87195635865186 22.99444603952296 22 22.728788285743395 31.020520942351805 25.840271924868713 20.410418847036087 23 24.358701256201513 25.750896073945782 25.724808822121993 24.16559384773072 24 28.25264808760377 26.74143983106575 24.520627452433217 20.485284628897265 25 23.103889007233423 28.82950051402691 26.740513656444787 21.326096822294875 26 27.173037204434525 28.5726414191465 24.85111742968019 19.403203946738785 27 22.25072781888964 29.00454751738893 28.631144782704 20.113579881017436 28 19.963385229984596 27.908419853479177 28.425379654413373 23.702815262122854 29 28.705393114817866 23.91815086149676 25.946782006279463 21.429674017405908 30 21.699036469669323 26.369889445622746 31.436218984727383 20.49485509998055 31 25.479526910003614 27.768721848150584 24.63485565568532 22.11689558616048 32 27.48222516539935 24.620963036370878 27.148956664289486 20.747855133940288 33 20.040257723524526 29.647312704337274 29.443091200414926 20.86933837172327 34 24.17639921830862 27.118238539360878 26.97221167412237 21.733150568208128 35 24.32427843278905 23.699573650949482 32.08454121940151 19.89160669685996 36 23.46170113579881 27.926634621024782 24.00119785250978 24.61046639066663 37 21.52136530488125 26.11411088780012 28.745990435703415 23.618533371615218 38 21.877633809078365 23.291285005541614 29.167091163367942 25.663990022012083 39 24.720526808124404 23.96121798137154 27.092151287537085 24.226103922966967 40 20.18798257556813 23.174587003300267 34.96633355252799 21.671096868603605 41 22.86123125654111 24.142439482206644 25.80337930246702 27.192949958785228 42 22.520090271153055 23.872613942632746 31.146326328365948 22.460969457848247 43 23.394244750905337 22.048821751519696 30.9847088570079 23.572224640567065 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 42.0 1 35.0 2 28.0 3 123.5 4 219.0 5 219.0 6 328.0 7 437.0 8 435.5 9 434.0 10 700.5 11 967.0 12 967.0 13 1472.5 14 1978.0 15 4753.0 16 7528.0 17 7750.5 18 7973.0 19 7973.0 20 6396.0 21 4819.0 22 3999.5 23 3180.0 24 3667.0 25 4154.0 26 4154.0 27 5258.0 28 6362.0 29 7947.0 30 9532.0 31 12388.0 32 15244.0 33 15244.0 34 19339.0 35 23434.0 36 25942.0 37 28450.0 38 33658.0 39 38866.0 40 38866.0 41 41792.5 42 44719.0 43 47392.5 44 50066.0 45 52029.5 46 53993.0 47 53993.0 48 56391.5 49 58790.0 50 73723.0 51 88656.0 52 67210.5 53 45765.0 54 45765.0 55 56391.0 56 67017.0 57 53826.0 58 40635.0 59 29325.0 60 18015.0 61 18015.0 62 15040.5 63 12066.0 64 9188.5 65 6311.0 66 4923.5 67 3536.0 68 3536.0 69 2807.0 70 2078.0 71 1643.5 72 1209.0 73 842.0 74 475.0 75 475.0 76 366.5 77 258.0 78 217.0 79 176.0 80 127.5 81 79.0 82 79.0 83 86.0 84 93.0 85 111.0 86 129.0 87 100.0 88 71.0 89 71.0 90 54.5 91 38.0 92 20.5 93 3.0 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 647826.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.912878365492094 #Duplication Level Percentage of deduplicated Percentage of total 1 73.39178162751803 16.816169654580783 2 10.953406754129274 5.019481532902473 3 3.8772714186811696 2.6651834521872186 4 2.0564522821073945 1.8847696401746143 5 1.323279033647372 1.516006577078408 6 1.0040349836326457 1.3803198872804194 7 0.7428045553967795 1.1913853298997892 8 0.612198897002476 1.1221791090004924 9 0.48627664546713223 1.0027797866611132 >10 4.398966629136661 20.901087882670506 >50 0.6864131678558766 10.9340971538665 >100 0.43995621441207516 18.640359719826787 >500 0.016973619383181916 2.6197279126869057 >1k 0.0054315582026182125 2.4164034244516452 >5k 0.0027157791013091063 3.8628541448888694 >10k+ 0.0020368343259818296 8.027194791843488 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGT 20707 3.1963829793802656 No Hit ATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATG 16453 2.5397251731174726 No Hit TCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTT 14440 2.228993587784374 TruSeq Adapter, Index 3 (95% over 21bp) ACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCC 8956 1.382469984224159 No Hit CTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTTC 5654 0.8727652178208346 RNA PCR Primer, Index 3 (95% over 22bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5196 0.8020672217539895 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5025 0.775671245056543 No Hit CATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTC 4566 0.7048188865528706 No Hit CACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCG 2091 0.32277185540561815 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1976 0.30502017517049335 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1765 0.27244970099995985 No Hit TTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTA 1611 0.24867788572857527 No Hit TATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTAT 1285 0.19835573132291695 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 1142 0.17628190285663126 No Hit ACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT 1097 0.1693355931994085 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 977 0.15081210078014776 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 960 0.14818793935408583 No Hit GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT 872 0.13460404491329464 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 809 0.12487921139318274 No Hit CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG 780 0.12040270072519471 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 746 0.11515437787307085 No Hit GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC 725 0.11191276669970023 No Hit GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTC 717 0.11067786720508285 No Hit GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 692 0.10681880628440352 No Hit GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAA 692 0.10681880628440352 No Hit TCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC 682 0.1052751819161318 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 666 0.10280538292689705 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 4.630873104815182E-4 0.0 11 0.0 0.0 0.0 9.261746209630364E-4 0.0 12 0.0 0.0 0.0 0.0010805370577902092 0.0 13 0.0 0.0 0.0 0.0010805370577902092 0.0 14 0.0 0.0 0.0 0.0010805370577902092 0.0 15 0.0 0.0 0.0 0.0010805370577902092 0.0 16 0.0 0.0 0.0 0.0012348994946173818 0.0 17 0.0 0.0 0.0 0.0012348994946173818 0.0 18 0.0 0.0 0.0 0.0015436243682717273 0.0 19 0.0 0.0 0.0 0.0015436243682717273 0.0 20 0.0 0.0 0.0 0.0018523492419260728 0.0 21 0.0 0.0 0.0 0.0027785238628891093 0.0 22 0.0 0.0 0.0 0.0033959736101978 0.0 23 0.0 0.0 0.0 0.0050939604152967 0.0 24 0.0 0.0 0.0 0.006946309657222773 0.0 25 0.0 0.0 0.0 0.007409396967704291 0.0 26 0.0 0.0 0.0 0.008026846715012982 0.0 27 0.0 0.0 0.0 0.008644296462321673 0.0 28 0.0 0.0 0.0 0.01914094216656942 0.0 29 0.0 0.0 0.0 0.04461074424305292 0.0 30 0.0 0.0 0.0 0.07455705698752443 0.0 31 0.0 0.0 0.0 0.13136243373992398 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATCG 20 0.0018413429 37.0 29 CTTATAC 2400 0.0 33.53125 1 TTATACA 2410 0.0 33.392117 2 CGTCTTC 665 0.0 32.82707 37 GATTACG 35 2.3867115E-5 31.714285 1 TATACAC 2600 0.0 31.307693 3 GGTATCA 730 0.0 30.917807 1 TCGCATG 25 0.005494594 29.6 37 TAGACCC 25 0.005494594 29.6 4 ATTCGAC 25 0.005494594 29.6 33 GCCATTT 25 0.005494594 29.6 33 CCTTTAT 50 2.7176793E-7 29.6 1 TCGACGG 25 0.005494594 29.6 35 CGCCTAT 45 4.004707E-6 28.777779 34 GGACCCG 35 8.8652014E-4 26.42857 21 CCAAAAC 35 8.8652014E-4 26.42857 20 TGTGGAT 50 9.083091E-6 25.900002 11 CCGTCTT 2070 0.0 25.024155 37 CTTATAT 45 1.3223411E-4 24.666668 32 CCACATA 45 1.3223411E-4 24.666668 13 >>END_MODULE