##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631117.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1121856 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.472798647954818 31.0 31.0 34.0 28.0 34.0 2 31.45136719864225 31.0 31.0 34.0 28.0 34.0 3 30.91931228250328 31.0 31.0 34.0 27.0 34.0 4 35.08492622939129 37.0 35.0 37.0 32.0 37.0 5 35.2935144974043 37.0 35.0 37.0 33.0 37.0 6 35.487785419875635 37.0 35.0 37.0 33.0 37.0 7 35.49806124850248 37.0 35.0 37.0 33.0 37.0 8 35.52166677363227 37.0 35.0 37.0 33.0 37.0 9 37.274463924068684 39.0 37.0 39.0 34.0 39.0 10 37.1211724142849 39.0 37.0 39.0 33.0 39.0 11 37.17618125677449 39.0 37.0 39.0 33.0 39.0 12 37.118580281248214 39.0 37.0 39.0 33.0 39.0 13 37.189616136117294 39.0 37.0 39.0 33.0 39.0 14 38.32933460265845 40.0 38.0 41.0 34.0 41.0 15 38.33529258657082 40.0 38.0 41.0 34.0 41.0 16 38.338425787266814 40.0 38.0 41.0 34.0 41.0 17 38.341443108562956 40.0 38.0 41.0 34.0 41.0 18 38.360105931599065 40.0 38.0 41.0 34.0 41.0 19 38.398001169490556 40.0 38.0 41.0 34.0 41.0 20 38.39584313851332 40.0 38.0 41.0 34.0 41.0 21 38.355509976324946 40.0 38.0 41.0 34.0 41.0 22 38.293426250784414 40.0 38.0 41.0 34.0 41.0 23 38.276181613326486 40.0 38.0 41.0 34.0 41.0 24 38.2524236622169 40.0 38.0 41.0 34.0 41.0 25 38.22372657453363 40.0 38.0 41.0 34.0 41.0 26 38.120755248445434 40.0 37.0 41.0 33.0 41.0 27 38.06938680187118 40.0 37.0 41.0 33.0 41.0 28 38.0253900678875 40.0 37.0 41.0 33.0 41.0 29 37.95821210565349 40.0 37.0 41.0 33.0 41.0 30 37.875924361058814 40.0 37.0 41.0 33.0 41.0 31 37.838763620286386 40.0 37.0 41.0 33.0 41.0 32 37.763566803582634 40.0 37.0 41.0 33.0 41.0 33 37.73922945547378 40.0 37.0 41.0 33.0 41.0 34 37.67856213275144 40.0 37.0 41.0 33.0 41.0 35 37.63129581693194 40.0 37.0 41.0 33.0 41.0 36 37.59186116578242 40.0 37.0 41.0 33.0 41.0 37 37.53996502224884 40.0 37.0 41.0 32.0 41.0 38 37.49235106822979 40.0 37.0 41.0 32.0 41.0 39 37.40839287751726 39.0 37.0 41.0 32.0 41.0 40 37.34842350533402 39.0 36.0 41.0 32.0 41.0 41 37.28690402333276 39.0 36.0 41.0 31.0 41.0 42 37.22285569627474 39.0 36.0 41.0 31.0 41.0 43 36.62002342546637 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 3.0 10 5.0 11 11.0 12 7.0 13 5.0 14 3.0 15 6.0 16 4.0 17 12.0 18 22.0 19 44.0 20 80.0 21 183.0 22 348.0 23 708.0 24 1253.0 25 2365.0 26 3833.0 27 5809.0 28 8908.0 29 12930.0 30 17884.0 31 24078.0 32 31158.0 33 41442.0 34 54783.0 35 74045.0 36 103539.0 37 155804.0 38 271393.0 39 311188.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.858145786981574 21.99658423184437 15.246163500484911 22.899106480689145 2 14.034243254036168 22.97496291859205 40.29982457641623 22.690969250955558 3 15.036065234753837 28.440281105596437 33.98047521250499 22.543178447144733 4 11.785202378914942 18.735470506018597 40.44030606423641 29.039021050830055 5 12.526741399965772 38.44370400479205 36.00934522790804 13.020209367334132 6 27.514048148782017 41.29674396714017 17.776791317245706 13.412416566832105 7 24.792486736265616 33.02402447372925 24.0242954532489 18.159193336756232 8 24.975754464031034 34.91900921330367 22.189568001597355 17.915668321067947 9 25.040736065947854 15.481755234183353 20.840910063323633 38.63659863654515 10 14.695736351189456 29.285309344514804 34.01720006845798 22.001754235837755 11 32.091997546922244 24.371131410804953 25.223914655713394 18.312956386559414 12 21.663653802270524 26.61125848593759 30.524594956928517 21.20049275486337 13 28.537708939471734 22.075203947743738 26.7711720577329 22.615915055051627 14 21.3368738946888 21.963068343887272 28.96681927092247 27.733238490501456 15 23.14370115237606 29.803825089851106 24.48255391066233 22.569919847110505 16 22.5060970391922 28.50419305151463 25.503718837355237 23.48599107193793 17 21.67943122825033 28.92795510297222 26.67935991785042 22.713253750927034 18 22.930839608648526 26.839808317645048 28.130972245992353 22.098379827714073 19 24.203373695019682 26.779729305721943 27.777005248445434 21.23989175081294 20 23.717215043641964 26.517752724057274 27.4977358948029 22.26729633749786 21 23.380362542073136 26.67668577785384 28.06991271607051 21.87303896400251 22 21.626572394317986 29.355995778424326 27.958401078213246 21.059030749044442 23 22.563323635118945 26.946684779508246 28.030424582121054 22.459567003251752 24 22.37524245535969 27.630908066632436 27.741260910491185 22.25258856751669 25 21.810464088082608 28.674268355296938 27.597570454675107 21.917697101945347 26 22.993236208568657 27.240572765132065 27.621192024644873 22.1449990016544 27 21.907981059957784 28.28535926179474 27.742954532489016 22.06370514575846 28 21.71749315420161 27.383193564949508 28.590211221404534 22.30910205944435 29 22.28877859547036 28.069645302070857 27.397544782931142 22.24403131952764 30 22.158458839637174 27.860973244337956 27.838599606366593 22.14196830965828 31 22.845534542757715 26.900956985566776 28.032029066119 22.221479405556508 32 21.540286810428434 28.69753337326716 28.19051642991614 21.57166338638827 33 21.183823948884704 27.980596440184836 28.795585173141653 22.039994437788806 34 22.96230532260825 27.2561719151121 27.851702892349824 21.92981986992983 35 21.559540618403787 27.73181228250328 28.942395458953733 21.7662516401392 36 22.22183595755605 27.18298961720577 27.676011894574703 22.919162530663474 37 22.361871755376804 27.068447287352388 28.517474613497633 22.052206343773175 38 22.291809287466485 26.50286667807633 28.499201323521024 22.706122710936164 39 22.941536168634833 26.694245963831364 28.05449184209025 22.309726025443553 40 21.756713874151405 26.462665440127786 29.79473301386274 21.985887671858066 41 22.013253037823034 26.457673712134177 27.871848080324035 23.65722516971875 42 21.960215927890925 26.52381410804952 28.937582006959893 22.578387957099665 43 22.43264732728621 26.47505562211193 28.94096925095556 22.1513277996463 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 32.0 1 38.5 2 45.0 3 182.0 4 319.0 5 319.0 6 379.0 7 439.0 8 463.0 9 487.0 10 761.5 11 1036.0 12 1036.0 13 1549.5 14 2063.0 15 4945.0 16 7827.0 17 8822.5 18 9818.0 19 9818.0 20 10274.5 21 10731.0 22 13363.5 23 15996.0 24 20546.5 25 25097.0 26 25097.0 27 30538.5 28 35980.0 29 41358.5 30 46737.0 31 51383.5 32 56030.0 33 56030.0 34 60535.5 35 65041.0 36 68320.0 37 71599.0 38 73532.5 39 75466.0 40 75466.0 41 75997.0 42 76528.0 43 76249.0 44 75970.0 45 76235.0 46 76500.0 47 76500.0 48 77467.0 49 78434.0 50 81540.0 51 84646.0 52 75467.5 53 66289.0 54 66289.0 55 67900.0 56 69511.0 57 60083.5 58 50656.0 59 43903.5 60 37151.0 61 37151.0 62 33200.5 63 29250.0 64 25120.0 65 20990.0 66 17196.0 67 13402.0 68 13402.0 69 11059.5 70 8717.0 71 7205.5 72 5694.0 73 3778.0 74 1862.0 75 1862.0 76 1315.0 77 768.0 78 593.0 79 418.0 80 300.5 81 183.0 82 183.0 83 137.5 84 92.0 85 62.0 86 32.0 87 23.5 88 15.0 89 15.0 90 10.0 91 5.0 92 2.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1121856.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.04452048521119 #Duplication Level Percentage of deduplicated Percentage of total 1 75.88653313781118 39.494782284424716 2 14.304617246405076 14.889538906272684 3 4.476720112047014 6.989662547339631 4 1.835978025104187 3.822103837517298 5 0.9155005314884908 2.382339308263724 6 0.5321025373318686 1.6615812842640774 7 0.3271179469109633 1.1917287682361497 8 0.24922293427681305 1.0376550486683231 9 0.18112963004724897 0.8484124267325496 >10 1.0877433182823346 10.860203729646468 >50 0.12376960203027339 4.495106296111144 >100 0.07389404148642864 6.963723041745569 >500 0.0032650848115923126 1.1946957434637848 >1k 0.0018903122593429177 2.438402811034334 >5k 5.15539707093523E-4 1.7300639662796418 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGT 7900 0.7041901990986366 No Hit ATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATG 6268 0.5587169832848422 No Hit TCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTT 5176 0.4613782874094358 RNA PCR Primer, Index 41 (95% over 22bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4805 0.4283080894517657 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4657 0.415115665468652 No Hit GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA 3956 0.3526299275486337 No Hit ACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCC 3543 0.3158159335957556 No Hit CTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTTC 1832 0.16330081579097494 RNA PCR Primer, Index 41 (95% over 23bp) CATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTC 1789 0.15946788179588112 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1781 0.1587547777967939 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1621 0.14449269781504936 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 1155 0.10295438986821838 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 8.913799988590336E-5 0.0 10 0.0 0.0 0.0 8.913799988590336E-5 0.0 11 0.0 0.0 0.0 8.913799988590336E-5 0.0 12 0.0 0.0 0.0 8.913799988590336E-5 0.0 13 0.0 0.0 0.0 1.7827599977180672E-4 0.0 14 0.0 0.0 0.0 1.7827599977180672E-4 0.0 15 0.0 0.0 0.0 1.7827599977180672E-4 0.0 16 0.0 0.0 0.0 1.7827599977180672E-4 0.0 17 0.0 0.0 0.0 2.6741399965771005E-4 0.0 18 0.0 0.0 0.0 2.6741399965771005E-4 0.0 19 0.0 0.0 0.0 2.6741399965771005E-4 0.0 20 0.0 0.0 0.0 3.5655199954361344E-4 0.0 21 0.0 0.0 0.0 4.456899994295168E-4 0.0 22 0.0 0.0 0.0 7.131039990872269E-4 0.0 23 0.0 0.0 0.0 0.001247931998402647 0.0 24 0.0 0.0 0.0 0.001782759997718067 0.0 25 0.0 0.0 0.0 0.0018718979976039705 0.0 26 0.0 0.0 0.0 0.001961035997489874 0.0 27 0.0 0.0 0.0 0.0029415539962348108 0.0 28 0.0 0.0 0.0 0.00980517998744937 0.0 29 0.0 0.0 0.0 0.027276227965086428 0.0 30 0.0 0.0 0.0 0.04822365793827372 0.0 31 0.0 0.0 0.0 0.10206300986935934 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTGAG 25 1.2336067E-4 37.0 35 CGTTACG 25 0.0054962877 29.6 16 GGTATCA 780 0.0 29.410254 1 GATTACG 95 0.0 29.210527 1 CTTATAC 1170 0.0 28.46154 1 GTATCAA 2520 0.0 24.960316 1 TATACAC 1435 0.0 24.623693 3 TTATACA 1410 0.0 24.141844 2 CGTCTTC 345 0.0 24.130436 37 CCGTCTT 930 0.0 23.274193 37 CGGCATT 40 0.0019311585 23.125 27 TACGTTA 40 0.0019311585 23.125 19 GCCGTCT 940 0.0 22.829786 36 GCTTTAT 875 0.0 21.777143 1 TTACGGG 140 0.0 21.142857 3 ACGTCCT 45 0.0038257516 20.555555 35 GATAGCG 45 0.0038257516 20.555555 2 CGCTTAA 45 0.0038257516 20.555555 1 CGCCGTT 55 5.1429874E-4 20.181818 25 AGGACCG 65 6.90194E-5 19.923077 5 >>END_MODULE