ERR1631099.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631099.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	791470
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGT	12110	1.5300643107129772	No Hit
ATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATG	11987	1.5145236079699798	No Hit
TCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTT	10847	1.370487826449518	TruSeq Adapter, Index 1 (95% over 22bp)
ACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCC	6351	0.8024309196810997	No Hit
CTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTC	4250	0.5369755012824239	RNA PCR Primer, Index 1 (95% over 23bp)
CATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTC	3080	0.38914930445879187	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1735	0.21921235170000125	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1713	0.2164327138110099	No Hit
CACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCG	1384	0.17486449265291165	No Hit
TTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTA	1161	0.14668907223268096	No Hit
TATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTAT	955	0.12066155381757994	No Hit
ACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGT	890	0.11244898732737817	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	1595	0.0	30.96865	1
TTATACA	1775	0.0	28.03662	2
CGTCTTC	590	0.0	27.59322	37
TATACAC	1880	0.0	27.356384	3
ATAATCG	45	1.3227036E-4	24.666666	15
CCGTCTT	1695	0.0	23.902657	37
GCCGTCT	1700	0.0	23.832352	36
GGTATCA	390	0.0	23.717949	1
GTCGCAA	40	0.0019306584	23.125002	18
GTATCAA	875	0.0	21.988571	1
ATACCGC	45	0.0038247714	20.555555	6
TGCCGTC	1980	0.0	20.555555	35
ATGCCGT	2100	0.0	19.292856	34
CGAAATT	80	1.6156337E-5	18.5	20
CGGCGTC	50	0.007032996	18.499998	24
CGCTATC	50	0.007032996	18.499998	12
CGTCGCA	50	0.007032996	18.499998	17
ATCGCTA	50	0.007032996	18.499998	10
TGCACGC	50	0.007032996	18.499998	37
CGCCATT	50	0.007032996	18.499998	33