##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631084.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 151619 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.6443387702069 31.0 30.0 31.0 25.0 34.0 2 29.615958422097496 31.0 30.0 31.0 25.0 34.0 3 29.111806567778444 31.0 28.0 31.0 23.0 34.0 4 33.202388882659825 35.0 33.0 37.0 28.0 37.0 5 32.345108462659695 35.0 32.0 37.0 25.0 37.0 6 32.71750901931816 35.0 32.0 37.0 26.0 37.0 7 32.87085391672548 35.0 32.0 37.0 26.0 37.0 8 32.977080708882134 35.0 32.0 37.0 26.0 37.0 9 34.44749009029211 37.0 33.0 39.0 27.0 39.0 10 34.026157671531934 37.0 32.0 39.0 27.0 39.0 11 34.33625732922655 37.0 32.0 39.0 27.0 39.0 12 34.13888760643455 37.0 32.0 39.0 27.0 39.0 13 34.413998245602464 37.0 33.0 39.0 27.0 39.0 14 34.96309169695091 37.0 33.0 39.0 27.0 40.0 15 34.97852511888352 37.0 33.0 39.0 27.0 40.0 16 35.05051477717173 37.0 33.0 39.0 27.0 40.0 17 34.87029989645097 37.0 33.0 39.0 27.0 40.0 18 35.118270137647656 37.0 33.0 40.0 27.0 41.0 19 35.06187878827851 37.0 33.0 40.0 27.0 40.0 20 35.02860459441099 37.0 33.0 40.0 27.0 40.0 21 34.96896826914833 37.0 33.0 39.0 27.0 40.0 22 34.67899801476068 37.0 32.0 39.0 26.0 40.0 23 34.79362744774731 37.0 33.0 39.0 27.0 40.0 24 34.63406301321074 37.0 32.0 39.0 26.0 40.0 25 34.54934407956787 37.0 32.0 39.0 25.0 40.0 26 34.22059240596495 37.0 32.0 39.0 25.0 40.0 27 34.04918249032114 37.0 32.0 39.0 24.0 40.0 28 34.02254334878874 37.0 32.0 39.0 24.0 40.0 29 33.94849590090951 37.0 32.0 39.0 24.0 40.0 30 33.8436409684802 36.0 31.0 39.0 24.0 40.0 31 33.76840633429847 36.0 31.0 39.0 24.0 40.0 32 33.481832751831895 36.0 31.0 39.0 24.0 40.0 33 33.17181223989078 36.0 30.0 39.0 22.0 40.0 34 33.024106477420375 36.0 30.0 39.0 22.0 40.0 35 33.00637123315679 36.0 30.0 39.0 22.0 40.0 36 33.020920860841976 36.0 30.0 39.0 22.0 40.0 37 32.96798554270903 36.0 30.0 39.0 22.0 40.0 38 32.865643487953356 36.0 30.0 39.0 21.0 40.0 39 32.614256788397235 35.0 30.0 38.0 20.0 40.0 40 32.16142435974383 35.0 30.0 38.0 19.0 40.0 41 32.255911198464574 35.0 30.0 38.0 19.0 40.0 42 32.15381977192832 35.0 30.0 38.0 19.0 40.0 43 31.316306003864952 34.0 28.0 38.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 15.0 11 12.0 12 9.0 13 12.0 14 12.0 15 29.0 16 28.0 17 58.0 18 108.0 19 197.0 20 320.0 21 502.0 22 828.0 23 1229.0 24 1879.0 25 2558.0 26 3672.0 27 4740.0 28 6138.0 29 7435.0 30 8999.0 31 10608.0 32 11997.0 33 13257.0 34 14118.0 35 14717.0 36 14645.0 37 14430.0 38 13577.0 39 5485.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.303464605359487 28.08289198583291 19.769949676491734 20.84369373231587 2 14.588541013989012 24.328745078123454 37.02702167934098 24.055692228546555 3 16.082417111311905 31.660280044057803 34.923063732118 17.334239112512286 4 12.157447285630429 18.508234456103786 32.249915907636904 37.08440235062888 5 11.433923189046228 40.507456189527694 31.207170605267148 16.851450016158925 6 26.75192423113198 37.28688357000112 17.531443948317822 18.429748250549075 7 20.910308074845503 38.23597306406189 20.268567923545202 20.585150937547407 8 27.226139204189447 30.761975741826554 24.4791220097745 17.5327630442095 9 20.699912280123204 14.626135246901772 17.86517520891181 46.80877726406321 10 14.145984342331767 25.85427947684657 32.43392978452568 27.565806396295976 11 28.82290478106306 22.522243254473384 21.49136981512871 27.163482149334843 12 17.221456413774 30.913012221423436 25.811408860367102 26.054122504435462 13 32.0810716335024 18.686971949425864 22.82101847393796 26.410937943133778 14 23.135622844102652 26.481509573338435 23.719322776169214 26.663544806389698 15 25.083927476107874 31.104940673662274 20.31011944413299 23.501012406096862 16 26.02510239481859 27.100165546534406 20.817971362428192 26.056760696218813 17 18.022147620021236 34.884809951259406 22.32965525428871 24.763387174430644 18 21.257889842302085 22.94369439186382 25.155818202204212 30.642597563629888 19 22.074410199249435 30.87343934467316 29.30767252125393 17.744477934823472 20 19.42038926519763 32.883741483587144 23.613135556889308 24.08273369432591 21 27.37123975227379 29.253589589695224 25.055566914436845 18.31960374359414 22 25.0252277089283 33.25440742914807 23.936314050349893 17.78405081157375 23 28.20358925992125 24.932231448565155 24.474505174153634 22.389674117359963 24 22.213574815821236 28.770800493341863 26.41357613491713 22.602048555919772 25 26.22362632651581 29.232484055428408 23.245107803111747 21.298781814944036 26 19.6598051695368 33.48195147046214 28.16863321879184 18.689610141209215 27 22.88169688495505 34.231197936934024 25.347087106497206 17.540018071613716 28 20.73618741714429 29.43166753507146 30.03647300140484 19.795672046379412 29 22.95754489872641 25.298280558505198 26.598909107697583 25.1452654350708 30 25.500761777877447 24.992250311636404 31.09240926269135 18.4145786477948 31 20.55876901971389 26.594292272076718 24.135497529992943 28.71144117821645 32 29.525982891326287 24.904530434839963 27.817753711606063 17.75173296222769 33 19.23835403214637 28.669230109682825 32.73138590809859 19.36102995007222 34 19.63408279964912 32.48471497635521 26.27639016218284 21.604812061812833 35 20.585150937547407 23.185088940040497 38.78999333856575 17.439766783846352 36 23.98643969423357 25.62937362731584 24.311596831531666 26.07258984691892 37 20.660998951318767 23.661282556935475 31.25201986558413 24.42569862616163 38 21.280314472460578 22.548625172306902 28.175888246196056 27.995172109036464 39 28.55446876710703 24.744919831947186 26.515146518576167 20.185464882369626 40 18.461406551949295 22.379780898172395 37.7439502964668 21.414862253411513 41 22.706257131362165 26.390491956812802 25.69466887395379 25.208582037871242 42 18.768096346763926 22.57104980246539 37.70239877587901 20.958455074891667 43 23.405377953950364 21.97415891148207 31.068005988695347 23.552457145872218 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 6.5 2 7.0 3 27.0 4 47.0 5 47.0 6 65.0 7 83.0 8 97.0 9 111.0 10 149.5 11 188.0 12 188.0 13 283.0 14 378.0 15 931.5 16 1485.0 17 1607.5 18 1730.0 19 1730.0 20 1764.5 21 1799.0 22 2012.0 23 2225.0 24 2769.5 25 3314.0 26 3314.0 27 3755.0 28 4196.0 29 4720.5 30 5245.0 31 5834.0 32 6423.0 33 6423.0 34 6833.5 35 7244.0 36 7652.0 37 8060.0 38 8223.5 39 8387.0 40 8387.0 41 8529.5 42 8672.0 43 8539.0 44 8406.0 45 8375.0 46 8344.0 47 8344.0 48 8837.5 49 9331.0 50 12867.0 51 16403.0 52 12063.5 53 7724.0 54 7724.0 55 13671.0 56 19618.0 57 15711.5 58 11805.0 59 7734.0 60 3663.0 61 3663.0 62 3103.0 63 2543.0 64 2097.5 65 1652.0 66 1357.5 67 1063.0 68 1063.0 69 825.5 70 588.0 71 488.0 72 388.0 73 309.0 74 230.0 75 230.0 76 180.5 77 131.0 78 105.0 79 79.0 80 51.0 81 23.0 82 23.0 83 19.5 84 16.0 85 11.0 86 6.0 87 6.0 88 6.0 89 6.0 90 3.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 151619.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.18667185511051 #Duplication Level Percentage of deduplicated Percentage of total 1 91.53053662202645 57.835099822581604 2 4.882936860014822 6.170730581259605 3 1.2817970209701157 2.429774632466907 4 0.6325480412930702 1.5987442207111247 5 0.39247205202342306 1.2399501381752946 6 0.23485694602465473 0.8903897268811957 7 0.19727983466070997 0.8725819323435716 8 0.13882655031679592 0.7017590143715497 9 0.10229324760184964 0.5817212882290478 >10 0.5647004791081699 6.2155798415765835 >50 0.019832364330970846 0.7696924527928558 >100 0.010438086489984656 1.374497919126231 >500 0.004175234595993863 1.8863071250964587 >1k 0.005219043244992328 7.628331541561415 >5k 0.0020876172979969313 9.804839762826559 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTT 8083 5.331126046207929 RNA PCR Primer, Index 46 (95% over 21bp) ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATG 6783 4.473713716618629 No Hit ACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCC 4073 2.686338783397859 No Hit CTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTC 2616 1.7253774263120056 RNA PCR Primer, Index 46 (95% over 22bp) CATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTC 2555 1.6851450016158926 No Hit CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGT 1291 0.8514763980767581 No Hit CACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCG 1031 0.6799939321588983 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 868 0.5724876169873169 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 769 0.5071923703493625 No Hit ACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGT 679 0.44783305522394956 No Hit TATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTAT 544 0.35879408253582995 No Hit TTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTA 479 0.31592346605636495 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 325 0.2143530823973249 No Hit ATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCT 301 0.19852393169721474 No Hit CTTTACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTA 201 0.13256913711342247 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 6.595479458379227E-4 0.0 21 0.0 0.0 0.0 6.595479458379227E-4 0.0 22 0.0 0.0 0.0 6.595479458379227E-4 0.0 23 0.0 0.0 0.0 6.595479458379227E-4 0.0 24 0.0 0.0 0.0 6.595479458379227E-4 0.0 25 0.0 0.0 0.0 0.001978643837513768 0.0 26 0.0 0.0 0.0 0.001978643837513768 0.0 27 0.0 0.0 0.0 0.001978643837513768 0.0 28 0.0 0.0 0.0 0.005276383566703381 0.0 29 0.0 0.0 0.0 0.0065954794583792265 0.0 30 0.0 0.0 0.0 0.011212315079244686 0.0 31 0.0 0.0 0.0 0.025062821941841062 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTTC 295 0.0 35.74576 37 GGTATCA 90 0.0 30.833334 1 CAGTACT 30 3.5848864E-4 30.833332 4 GTGCAAA 25 0.005481491 29.6 11 GGATAAG 25 0.005481491 29.6 1 CAGTGCA 25 0.005481491 29.6 9 ATGCCGC 25 0.005481491 29.6 34 CTTATAC 190 0.0 28.236843 1 CCGTCTT 1175 0.0 27.395744 37 GCCGTCT 1215 0.0 26.493828 36 TGATATA 35 8.8337803E-4 26.42857 2 GTGTAGG 35 8.8337803E-4 26.42857 1 TTATACA 215 0.0 25.813953 2 ATACACA 1015 0.0 25.334976 1 TACACAT 1015 0.0 25.15271 2 CTACACA 45 1.315824E-4 24.666668 4 TGCCGTC 1480 0.0 21.75 35 GTATCAA 230 0.0 21.717392 1 TATATAT 60 3.6988946E-5 21.583332 2 GTATATA 70 5.0538856E-6 21.142857 1 >>END_MODULE