##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631078.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1043065 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.527182869715695 31.0 31.0 34.0 28.0 34.0 2 31.516086725180116 31.0 31.0 34.0 28.0 34.0 3 30.999860986611573 31.0 31.0 34.0 27.0 34.0 4 35.151515964968624 37.0 35.0 37.0 32.0 37.0 5 35.34552496728392 37.0 35.0 37.0 33.0 37.0 6 35.531279450465696 37.0 35.0 37.0 33.0 37.0 7 35.53474136319405 37.0 35.0 37.0 33.0 37.0 8 35.55271819110027 37.0 35.0 37.0 33.0 37.0 9 37.34826688653152 39.0 37.0 39.0 34.0 39.0 10 37.163169121770935 39.0 37.0 39.0 33.0 39.0 11 37.23174969920379 39.0 37.0 39.0 34.0 39.0 12 37.14721134349249 39.0 37.0 39.0 33.0 39.0 13 37.234947965850644 39.0 37.0 39.0 34.0 39.0 14 38.403177174960334 40.0 38.0 41.0 34.0 41.0 15 38.407969781365495 40.0 38.0 41.0 34.0 41.0 16 38.41415060422888 40.0 38.0 41.0 34.0 41.0 17 38.36934419235618 40.0 38.0 41.0 34.0 41.0 18 38.3960577720468 40.0 38.0 41.0 34.0 41.0 19 38.43994381941682 40.0 38.0 41.0 34.0 41.0 20 38.42046085335046 40.0 38.0 41.0 34.0 41.0 21 38.37944806891229 40.0 38.0 41.0 34.0 41.0 22 38.30790698566245 40.0 38.0 41.0 34.0 41.0 23 38.30692813966532 40.0 38.0 41.0 34.0 41.0 24 38.280514637151086 40.0 38.0 41.0 34.0 41.0 25 38.23953924252084 40.0 38.0 41.0 34.0 41.0 26 38.15917991687958 40.0 38.0 41.0 33.0 41.0 27 38.074111392866214 40.0 37.0 41.0 33.0 41.0 28 38.046921332802846 40.0 37.0 41.0 33.0 41.0 29 37.96753030731546 40.0 37.0 41.0 33.0 41.0 30 37.887266852976566 40.0 37.0 41.0 33.0 41.0 31 37.86085526788839 40.0 37.0 41.0 33.0 41.0 32 37.765779697334295 40.0 37.0 41.0 33.0 41.0 33 37.7700871949495 40.0 37.0 41.0 33.0 41.0 34 37.72732475924319 40.0 37.0 41.0 33.0 41.0 35 37.70544596933077 40.0 37.0 41.0 33.0 41.0 36 37.69180348300441 40.0 37.0 41.0 33.0 41.0 37 37.63720381759526 40.0 37.0 41.0 33.0 41.0 38 37.61677172563551 40.0 37.0 41.0 33.0 41.0 39 37.5355303840125 40.0 37.0 41.0 32.0 41.0 40 37.45169093009544 39.0 37.0 41.0 32.0 41.0 41 37.410707865761005 39.0 36.0 41.0 32.0 41.0 42 37.35382071107745 39.0 36.0 41.0 32.0 41.0 43 36.70951282997704 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 13.0 11 13.0 12 17.0 13 9.0 14 7.0 15 3.0 16 7.0 17 15.0 18 22.0 19 30.0 20 65.0 21 148.0 22 326.0 23 595.0 24 1085.0 25 2069.0 26 3439.0 27 5314.0 28 7821.0 29 11611.0 30 16041.0 31 21715.0 32 28577.0 33 37593.0 34 50106.0 35 67537.0 36 95476.0 37 142181.0 38 248777.0 39 302446.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.253291980844914 21.7891502447115 14.303135470943806 23.654422303499782 2 14.33506061463092 22.384127547180665 40.97338133289872 22.307430505289698 3 14.919396202537714 27.888290758485805 33.51584033593304 23.676472703043437 4 11.334959949763437 19.171000848461027 39.07484193219023 30.419197269585307 5 12.545239270802874 37.7940013326111 36.52734968578181 13.133409710804218 6 28.240617794672428 40.552410444219674 17.511468604545257 13.69550315656263 7 26.136530321696156 32.22397453658209 22.840666689036638 18.798828452685115 8 24.709198372105288 35.41390038012972 21.814939625047337 18.061961622717664 9 24.307018258689535 14.773192466433061 20.02943248982566 40.89035678505174 10 14.323460187044912 29.220614247434245 34.34666104221693 22.109264523303917 11 32.03664201176341 23.829003945104095 24.935167031776544 19.199187011355956 12 21.120735524631733 25.674430644303087 30.233686299511536 22.971147531553644 13 28.289608030180286 21.371343109010464 27.30721479485938 23.03183406594987 14 21.77544064847349 21.881378437585386 26.73026129723459 29.612919616706534 15 23.013330904593673 29.391552779548736 23.95852607459746 23.636590241260134 16 24.906597383672157 27.863172477266517 23.596324294267376 23.633905844793947 17 22.238882524099647 29.29942045797721 25.159889364517074 23.30180765340607 18 23.77234400540714 25.916122197561993 26.87541044901324 23.43612334801762 19 25.546346584345176 26.860071040635052 26.127710161878692 21.46587221314108 20 24.063121665476263 27.045102654197006 25.75266162703187 23.139114053294858 21 24.11757656521885 27.182102745274744 25.506751736468964 23.193568953037445 22 23.50342500227694 28.40187332524819 26.23115529712913 21.863546375345734 23 22.49390018838711 26.214665433122576 26.997742230829335 24.29369214766098 24 23.723833126411105 28.435428281075488 26.285322582964625 21.555416009548782 25 22.462933757723633 29.026091374938286 26.291650088920633 22.21932477841745 26 25.685264101470185 26.71482601755403 25.360548000364314 22.239361880611465 27 23.471691601194557 28.55766419158921 25.250200131343686 22.72044407587255 28 22.071299487567888 26.618858843887967 27.378255429910887 23.93158623863326 29 25.331690738352837 26.796795981075007 26.75653003408225 21.114983246489913 30 23.804748505606074 26.813573458988653 26.331244936796843 23.050433098608426 31 22.342231788047727 26.849621068677408 27.322170718028122 23.48597642524675 32 23.345524967283918 27.813798756549208 26.78433271176772 22.05634356439915 33 21.78138466922004 25.489686644648224 27.943033272135487 24.78589541399625 34 22.65601856068414 27.168105535129644 28.352978961042695 21.822896943143526 35 22.188550090358703 28.0655567965563 27.920791129987105 21.825101983097888 36 22.804043851533702 25.960414739254023 25.111570228125764 26.123971181086507 37 22.49188689103747 27.15612162233418 27.8130317861303 22.53895970049805 38 22.133040606290116 25.240037773293132 27.931720458456567 24.695201161960185 39 23.564207407975534 25.923696030448724 27.082396590816487 23.429699970759252 40 22.191713843336704 25.76646709457225 29.93888204474314 22.102937017347912 41 22.720060590663095 26.36317008048396 26.205749402002752 24.7110199268502 42 22.58449856912081 27.205974699563306 27.875635746573803 22.333890984742084 43 23.858340563627387 24.529439680173333 28.12125802322962 23.490961732969662 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 12.0 1 17.0 2 22.0 3 106.0 4 190.0 5 190.0 6 253.5 7 317.0 8 301.0 9 285.0 10 437.5 11 590.0 12 590.0 13 896.5 14 1203.0 15 2728.0 16 4253.0 17 5028.0 18 5803.0 19 5803.0 20 6179.0 21 6555.0 22 8615.5 23 10676.0 24 14011.5 25 17347.0 26 17347.0 27 21076.5 28 24806.0 29 29295.0 30 33784.0 31 38584.5 32 43385.0 33 43385.0 34 54430.5 35 65476.0 36 67044.5 37 68613.0 38 69242.0 39 69871.0 40 69871.0 41 69626.0 42 69381.0 43 71779.5 44 74178.0 45 72467.5 46 70757.0 47 70757.0 48 67429.0 49 64101.0 50 66355.0 51 68609.0 52 82107.0 53 95605.0 54 95605.0 55 80620.0 56 65635.0 57 62074.5 58 58514.0 59 51392.5 60 44271.0 61 44271.0 62 36507.0 63 28743.0 64 21917.0 65 15091.0 66 12729.0 67 10367.0 68 10367.0 69 8825.5 70 7284.0 71 7947.5 72 8611.0 73 7778.5 74 6946.0 75 6946.0 76 3952.5 77 959.0 78 696.0 79 433.0 80 318.0 81 203.0 82 203.0 83 148.5 84 94.0 85 74.0 86 54.0 87 40.5 88 27.0 89 27.0 90 20.5 91 14.0 92 7.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1043065.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.667187650030954 #Duplication Level Percentage of deduplicated Percentage of total 1 82.5749903792334 41.01267542364885 2 10.710037951676107 10.638749293697005 3 2.6913338576737953 4.010129512138983 4 1.0715897709665423 2.128914009537958 5 0.5866880180681615 1.4569571942708062 6 0.38651109872530903 1.1518151561525736 7 0.24995223151026572 0.8690097070175042 8 0.183768965640274 0.7301830160566064 9 0.15576545547468848 0.6962788895808504 >10 1.1399928782934676 11.430000831217995 >50 0.13727201789191795 4.858464123158351 >100 0.09757698957245214 9.649574234164623 >500 0.008905836301190243 3.133700449442236 >1k 0.004646523287577519 3.8625798077156457 >5k 5.808154109471898E-4 1.747868086455906 >10k+ 3.8721027396479326E-4 2.6231002657441085 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGT 16220 1.555032524339327 No Hit ATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATG 11059 1.0602407328402352 No Hit TCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTT 7419 0.7112691922363419 TruSeq Adapter, Index 11 (95% over 23bp) ACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCC 5572 0.5341948967705752 No Hit GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG 5186 0.4971885740581843 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2871 0.2752465090862027 No Hit GTATTTACAGTTTTCAGTTTCTAATGCAAGGGTCTCGCTGAAG 2702 0.2590442589867362 No Hit CTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTTC 2628 0.2519497826118219 RNA PCR Primer, Index 11 (95% over 24bp) ATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAA 2604 0.24964887135509292 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2431 0.23306313604617163 No Hit CATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTC 2415 0.23152919520835233 TruSeq Adapter, Index 11 (95% over 21bp) GTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAG 2058 0.19730314026450893 No Hit GGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTC 1982 0.1900169212848672 No Hit GTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTC 1639 0.15713306457411572 No Hit AGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAAGAAAT 1595 0.1529147272701126 No Hit GAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGAC 1471 0.14102668577701294 No Hit ATGCAAGGGTCTCGCTGAAGACTTGGAGGATTAGGGAAGAGAG 1439 0.13795880410137432 No Hit CACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCG 1420 0.13613724935646387 No Hit AGCTAACAGGATGTGAAAGTCTTCCAGAAGAAATTCTTGCAGC 1396 0.13383633809973491 No Hit GTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAA 1311 0.12568727739881982 No Hit GGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAAC 1303 0.12492030697991018 No Hit CTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAAT 1252 0.12003087055936111 No Hit GTCCATCGTCCTGGCCCTGGGCTGTGTCACCGGCGCTCCCTCG 1250 0.11983912795463371 No Hit GCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCT 1099 0.10536256129771394 No Hit AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCAC 1088 0.10430797697171318 No Hit ATTTCATCCTGCTCAGCAGCCTGGGACAGATCTTCAGGTTCCA 1060 0.10162358050552937 No Hit ATTTTATTTTGTATTTACAGTTTTCAGTTTCTAATGCAAGGGT 1059 0.10152770920316567 No Hit TTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTA 1055 0.10114422399371084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 9.587130236370697E-5 0.0 8 0.0 0.0 0.0 9.587130236370697E-5 0.0 9 0.0 0.0 0.0 1.9174260472741393E-4 0.0 10 0.0 0.0 0.0 1.9174260472741393E-4 0.0 11 0.0 0.0 0.0 2.876139070911209E-4 0.0 12 0.0 0.0 0.0 2.876139070911209E-4 0.0 13 0.0 0.0 0.0 2.876139070911209E-4 0.0 14 0.0 0.0 0.0 2.876139070911209E-4 0.0 15 0.0 0.0 0.0 2.876139070911209E-4 0.0 16 9.587130236370697E-5 0.0 0.0 2.876139070911209E-4 0.0 17 9.587130236370697E-5 0.0 0.0 3.8348520945482786E-4 0.0 18 1.9174260472741393E-4 0.0 0.0 4.793565118185348E-4 0.0 19 1.9174260472741393E-4 0.0 0.0 4.793565118185348E-4 0.0 20 1.9174260472741393E-4 0.0 0.0 5.752278141822418E-4 0.0 21 2.876139070911209E-4 0.0 0.0 7.669704189096557E-4 0.0 22 2.876139070911209E-4 0.0 0.0 0.0012463269307281906 0.0 23 3.8348520945482786E-4 0.0 0.0 0.0016298121401830184 0.0 24 3.8348520945482786E-4 0.0 0.0 0.0020132973496378463 0.0 25 3.8348520945482786E-4 0.0 0.0 0.002492653861456381 0.0 26 3.8348520945482786E-4 0.0 0.0 0.002780267768547502 0.0 27 3.8348520945482786E-4 0.0 0.0 0.003355495582729744 0.0 28 3.8348520945482786E-4 0.0 0.0 0.008340803305642505 0.0 29 3.8348520945482786E-4 0.0 0.0 0.018503161356195442 0.0 30 3.8348520945482786E-4 0.0 0.0 0.03489715406038933 0.0 31 3.8348520945482786E-4 0.0 0.0 0.07928556705478565 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATTACG 90 0.0 32.88889 1 CTTATAC 1900 0.0 31.157894 1 TTATACA 2000 0.0 29.599998 2 TATACAC 2115 0.0 28.427896 3 GGTATCA 585 0.0 28.145298 1 CGTCTTC 385 0.0 25.948051 37 CCGTCTT 1125 0.0 25.488888 37 GCCGTCT 1145 0.0 25.043669 36 GTATCAA 1675 0.0 24.298508 1 CCGGCGT 65 2.682451E-6 22.76923 23 GACGATT 50 2.7018698E-4 22.2 14 CTGCGAC 60 3.72586E-5 21.583334 18 TGCCGTC 1375 0.0 20.854546 35 ACACCGT 45 0.003825575 20.555555 6 TCGGCGT 55 5.1426556E-4 20.181818 11 ATCGGCG 55 5.1426556E-4 20.181818 10 GCGCTAT 55 5.1426556E-4 20.181818 19 GCGACTC 65 6.901347E-5 19.923077 20 GCGTCAA 65 6.901347E-5 19.923077 26 ATGCCGT 1485 0.0 19.309765 34 >>END_MODULE