##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631069.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1422823 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.549061267634837 31.0 31.0 34.0 30.0 34.0 2 31.52057002171036 31.0 31.0 34.0 28.0 34.0 3 30.998408094330777 31.0 31.0 34.0 27.0 34.0 4 35.14526965054684 37.0 35.0 37.0 32.0 37.0 5 35.35140913521921 37.0 35.0 37.0 33.0 37.0 6 35.53220674672816 37.0 35.0 37.0 33.0 37.0 7 35.54850392494358 37.0 35.0 37.0 33.0 37.0 8 35.55715292766563 37.0 35.0 37.0 33.0 37.0 9 37.33095191742051 39.0 37.0 39.0 34.0 39.0 10 37.16963951243408 39.0 37.0 39.0 33.0 39.0 11 37.23650728165063 39.0 37.0 39.0 34.0 39.0 12 37.17589257412904 39.0 37.0 39.0 33.0 39.0 13 37.237216435213654 39.0 37.0 39.0 34.0 39.0 14 38.42386579356673 40.0 38.0 41.0 34.0 41.0 15 38.42992979450009 40.0 38.0 41.0 34.0 41.0 16 38.426824699909965 40.0 38.0 41.0 34.0 41.0 17 38.407210173015194 40.0 38.0 41.0 34.0 41.0 18 38.42956291822665 40.0 38.0 41.0 34.0 41.0 19 38.46246159922914 40.0 38.0 41.0 34.0 41.0 20 38.45550641225226 40.0 38.0 41.0 34.0 41.0 21 38.40640051503244 40.0 38.0 41.0 34.0 41.0 22 38.36732397494277 40.0 38.0 41.0 34.0 41.0 23 38.34158430106907 40.0 38.0 41.0 34.0 41.0 24 38.31323291793849 40.0 38.0 41.0 34.0 41.0 25 38.29073468730826 40.0 38.0 41.0 34.0 41.0 26 38.18211611704337 40.0 38.0 41.0 33.0 41.0 27 38.136482190687104 40.0 38.0 41.0 33.0 41.0 28 38.09671828470583 40.0 38.0 41.0 33.0 41.0 29 38.02527861863352 40.0 37.0 41.0 33.0 41.0 30 37.944254485624704 40.0 37.0 41.0 33.0 41.0 31 37.92979520291702 40.0 37.0 41.0 33.0 41.0 32 37.86200602604821 40.0 37.0 41.0 33.0 41.0 33 37.83810987030713 40.0 37.0 41.0 33.0 41.0 34 37.773841159441474 40.0 37.0 41.0 33.0 41.0 35 37.72849539261033 40.0 37.0 41.0 33.0 41.0 36 37.69718018333974 40.0 37.0 41.0 33.0 41.0 37 37.65120608817822 40.0 37.0 41.0 33.0 41.0 38 37.60179656921486 40.0 37.0 41.0 32.0 41.0 39 37.53859475142024 40.0 37.0 41.0 32.0 41.0 40 37.483501461531056 40.0 37.0 41.0 32.0 41.0 41 37.41497501797483 40.0 37.0 41.0 32.0 41.0 42 37.35057347259638 39.0 36.0 41.0 31.0 41.0 43 36.7463936132604 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 9.0 11 9.0 12 6.0 13 6.0 14 6.0 15 6.0 16 8.0 17 12.0 18 18.0 19 53.0 20 109.0 21 206.0 22 453.0 23 805.0 24 1632.0 25 2728.0 26 4720.0 27 7185.0 28 10847.0 29 15809.0 30 21959.0 31 29598.0 32 38558.0 33 50427.0 34 66637.0 35 91280.0 36 126891.0 37 189640.0 38 339269.0 39 423929.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.60237991654619 20.739543850500027 14.262912533744535 24.39516369920925 2 14.565761166357305 22.0210806263323 39.9800959079239 23.4330622993865 3 15.469035853370377 27.245131685388834 32.91098049441146 24.374851966829326 4 12.683587487691723 18.415994118734375 38.72540716589484 30.17501122767906 5 13.563317433018723 37.28728028714745 35.32308656804114 13.826315711792683 6 29.223803663561803 39.37917787384657 17.683717510892077 13.713300951699544 7 26.24163370988521 32.05493585639253 23.143145703998318 18.560284729723936 8 25.158435026703952 35.22700996539977 21.3393373596013 18.275217648294976 9 25.529949965666848 15.174902289322004 20.148605975585156 39.146541769425994 10 15.224029974213238 28.357357169514408 33.386092296793066 23.032520559479288 11 33.19590701021842 23.145254188328416 24.863598634545546 18.79524016690762 12 22.236075745191076 25.274542230481234 30.520310678137758 21.969071346189935 13 28.85502975422804 21.365833979349507 26.27846190285088 23.500674363571576 14 22.06163380828114 21.047031148639007 27.58888491400547 29.30245012907438 15 23.86473932456813 28.341402971416684 23.764797167321586 24.029060536693603 16 23.767678762572718 27.692833191479195 24.450968251145785 24.088519794802306 17 22.50687541598639 28.106939513910024 25.954879840992167 23.43130522911142 18 23.895101498921512 26.442010004055316 26.64681411531863 23.01607438170454 19 24.563280183128892 26.467733512882486 26.241422861452197 22.72756344253642 20 23.971077217615967 25.965773676697662 26.522764953897994 23.54038415178838 21 23.983236143919516 26.169945242661946 26.714707310747716 23.132111302670815 22 22.872556881636015 27.800857871991102 26.52149986329993 22.80508538307295 23 23.446837730343127 26.25491716116481 26.75589303799559 23.54235207049647 24 23.783914091914454 26.508778674508353 26.42746146217766 23.279845771399536 25 23.261361392105695 27.231637385676223 26.37411680862623 23.132884413591853 26 23.95842631163539 26.30566135070912 26.323091487837914 23.41282084981758 27 23.27007646067009 27.5631614051783 26.113718993859393 23.053043140292225 28 22.824834852964845 26.411858678134948 27.016993680872464 23.746312788027744 29 23.51922902567642 26.705429979695296 25.986507105943605 23.788833888684678 30 22.766781251076207 26.958377816495798 26.861528102933395 23.413312829494604 31 24.23182644643782 25.749443184429825 26.779016082815644 23.23971428631671 32 22.819985339005626 27.325113524310474 26.72707708548428 23.12782405119962 33 22.74710206399531 26.727498782350303 27.267903316153873 23.25749583750052 34 23.409868971755447 26.452482142894794 26.685891358236407 23.45175752711335 35 22.86798849892081 26.950857555718454 27.383799671498142 22.797354273862595 36 23.518666763188396 26.188640470388798 26.242969083294266 24.04972368312854 37 23.68221486439283 26.38838421925988 26.61849014248434 23.310910773862947 38 23.17217250494264 25.94827325675787 27.01825877147052 23.86129546682897 39 23.709133181007054 25.789434103890645 26.675981481884957 23.825451233217343 40 22.92660436329747 25.975613270238114 27.986615341472554 23.111167024991865 41 23.455060819230503 25.7422040548965 26.61427317382415 24.188461952048847 42 23.425893452664177 25.769825199620755 27.438971678135648 23.36530966957942 43 23.48689893261495 25.37364099399574 27.610532019794448 23.52892805359486 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 16.5 2 31.0 3 97.5 4 164.0 5 164.0 6 228.0 7 292.0 8 307.0 9 322.0 10 514.0 11 706.0 12 706.0 13 1086.0 14 1466.0 15 3508.5 16 5551.0 17 6421.5 18 7292.0 19 7292.0 20 7550.5 21 7809.0 22 9616.0 23 11423.0 24 15369.5 25 19316.0 26 19316.0 27 24689.5 28 30063.0 29 36131.5 30 42200.0 31 48852.5 32 55505.0 33 55505.0 34 63209.0 35 70913.0 36 76533.0 37 82153.0 38 87739.0 39 93325.0 40 93325.0 41 96652.5 42 99980.0 43 102399.0 44 104818.0 45 106913.5 46 109009.0 47 109009.0 48 110571.0 49 112133.0 50 115614.0 51 119095.0 52 108411.0 53 97727.0 54 97727.0 55 96890.0 56 96053.0 57 86178.5 58 76304.0 59 66339.5 60 56375.0 61 56375.0 62 49729.5 63 43084.0 64 36324.5 65 29565.0 66 24903.0 67 20241.0 68 20241.0 69 16632.0 70 13023.0 71 10520.5 72 8018.0 73 6106.5 74 4195.0 75 4195.0 76 3247.5 77 2300.0 78 1730.0 79 1160.0 80 903.0 81 646.0 82 646.0 83 489.0 84 332.0 85 233.5 86 135.0 87 103.5 88 72.0 89 72.0 90 45.0 91 18.0 92 12.5 93 7.0 94 3.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1422823.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.480250277033804 #Duplication Level Percentage of deduplicated Percentage of total 1 75.9831194273938 42.915456020889515 2 14.06875847205098 15.892139991771579 3 4.413915957558644 7.4789723395411665 4 1.926226170583685 4.3517494481895564 5 1.0064752599581246 2.8422987290038764 6 0.5970370017692642 2.023247957074675 7 0.380175843355758 1.5030698747410924 8 0.2753224016764076 1.2440222522846025 9 0.20015854606836467 1.0174504299325595 >10 1.0358913216350383 10.379686227948657 >50 0.07323657000893595 2.8238712725860484 >100 0.03555204477881317 3.679050298243612 >500 0.0022532635429968477 0.8575532426913338 >1k 0.0016273570032755012 1.9106701979133156 >5k 2.5036261588853864E-4 1.0807617171885342 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGT 9277 0.6520136376766471 No Hit ATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATG 6009 0.4223294113182033 No Hit TCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTT 4364 0.3067141872179463 RNA PCR Primer, Index 41 (95% over 22bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3533 0.2483091712742906 No Hit ACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCC 3240 0.22771630765035428 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3134 0.2202663296840155 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 2449 0.17212260414682642 No Hit CATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTC 1612 0.11329589133715157 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 1464 0.10289403530867858 No Hit CTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTTC 1454 0.10219120719864663 RNA PCR Primer, Index 41 (95% over 23bp) TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 1436 0.10092611660058912 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.028281100319575E-5 0.0 5 0.0 0.0 0.0 7.028281100319575E-5 0.0 6 0.0 0.0 0.0 7.028281100319575E-5 0.0 7 0.0 0.0 0.0 7.028281100319575E-5 0.0 8 0.0 0.0 0.0 7.028281100319575E-5 0.0 9 0.0 0.0 0.0 7.028281100319575E-5 0.0 10 0.0 7.028281100319575E-5 0.0 1.405656220063915E-4 0.0 11 0.0 7.028281100319575E-5 0.0 1.405656220063915E-4 0.0 12 0.0 7.028281100319575E-5 0.0 1.405656220063915E-4 0.0 13 0.0 7.028281100319575E-5 0.0 2.1084843300958728E-4 0.0 14 0.0 7.028281100319575E-5 0.0 2.1084843300958728E-4 0.0 15 0.0 7.028281100319575E-5 0.0 2.1084843300958728E-4 0.0 16 0.0 7.028281100319575E-5 0.0 2.1084843300958728E-4 0.0 17 0.0 7.028281100319575E-5 0.0 3.514140550159788E-4 0.0 18 0.0 1.405656220063915E-4 0.0 3.514140550159788E-4 0.0 19 0.0 1.405656220063915E-4 0.0 4.2169686601917455E-4 0.0 20 0.0 1.405656220063915E-4 0.0 5.62262488025566E-4 0.0 21 0.0 1.405656220063915E-4 0.0 9.136765430415449E-4 0.0 22 0.0 1.405656220063915E-4 0.0 0.0014056562200639151 0.0 23 0.0 2.1084843300958728E-4 0.0 0.001757070275079894 0.0 24 0.0 2.1084843300958728E-4 0.0 0.002249049952102264 0.0 25 0.0 2.1084843300958728E-4 0.0 0.0024598983851118516 0.0 26 0.0 2.1084843300958728E-4 0.0 0.0028113124401278303 0.0 27 0.0 2.1084843300958728E-4 0.0 0.003514140550159788 0.0 28 0.0 2.81131244012783E-4 0.0 0.011385815382517712 0.0 29 0.0 2.81131244012783E-4 0.0 0.027621144724255933 0.0 30 0.0 2.81131244012783E-4 0.0 0.048776270836217855 0.0 31 0.0 2.81131244012783E-4 0.0 0.10324544936369458 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATTACG 140 0.0 29.07143 1 CTTATAC 1415 0.0 27.848059 1 TTACGGG 175 0.0 26.428572 3 TATACAC 1740 0.0 25.410917 3 CCGTCTT 850 0.0 25.029413 37 ATTACGG 165 0.0 24.666664 2 GCCGTCT 885 0.0 24.039549 36 GTATCAA 2160 0.0 23.724535 1 TTATACA 1820 0.0 22.464287 2 GGTATCA 800 0.0 21.968752 1 TGCCGTC 1000 0.0 21.46 35 ATGCCGT 1060 0.0 20.070755 34 GCGGGTA 85 1.2457349E-6 19.588236 22 TATGCCG 1140 0.0 18.82456 33 GTCCTAT 115 6.408118E-8 17.69565 1 TACACAT 2355 0.0 17.596603 5 TTACCGG 85 2.723853E-5 17.411764 31 ATACACA 2540 0.0 16.606298 4 TAGGACC 255 0.0 15.960786 4 ACACATC 2615 0.0 15.210324 6 >>END_MODULE