##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631056.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 203970 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.194533509829878 31.0 31.0 34.0 28.0 34.0 2 31.263867235377752 31.0 31.0 34.0 28.0 34.0 3 30.686659802912192 31.0 31.0 34.0 26.0 34.0 4 34.81053096043536 37.0 35.0 37.0 32.0 37.0 5 35.062151296759325 35.0 35.0 37.0 32.0 37.0 6 35.28275236554395 37.0 35.0 37.0 32.0 37.0 7 35.26635779771535 37.0 35.0 37.0 32.0 37.0 8 35.30471147717802 37.0 35.0 37.0 32.0 37.0 9 37.136284747757024 39.0 37.0 39.0 34.0 39.0 10 36.94931607589351 39.0 37.0 39.0 33.0 39.0 11 36.97572191989018 39.0 37.0 39.0 33.0 39.0 12 36.870829043486786 39.0 37.0 39.0 33.0 39.0 13 36.99220963867236 39.0 37.0 39.0 33.0 39.0 14 37.80805020346129 39.0 37.0 41.0 33.0 41.0 15 37.868117860469674 39.0 37.0 41.0 33.0 41.0 16 37.805142913173505 39.0 37.0 41.0 33.0 41.0 17 37.80515271853704 39.0 37.0 41.0 33.0 41.0 18 37.97071137912438 40.0 37.0 41.0 33.0 41.0 19 37.90057361376673 40.0 37.0 41.0 33.0 41.0 20 37.959092023336765 40.0 37.0 41.0 33.0 41.0 21 37.7686179340099 39.0 37.0 41.0 32.0 41.0 22 37.41268323773104 39.0 36.0 41.0 31.0 41.0 23 37.54942393489239 39.0 36.0 41.0 32.0 41.0 24 37.28290925136049 39.0 36.0 41.0 31.0 41.0 25 37.20226503897632 39.0 36.0 40.0 31.0 41.0 26 37.10716281806148 39.0 36.0 40.0 31.0 41.0 27 36.79981860077462 39.0 35.0 40.0 30.0 41.0 28 36.89548953277443 39.0 35.0 40.0 31.0 41.0 29 36.522307202039514 39.0 35.0 40.0 30.0 41.0 30 36.33688287493259 38.0 35.0 40.0 30.0 41.0 31 36.2999852919547 38.0 35.0 40.0 30.0 41.0 32 35.699421483551504 38.0 34.0 40.0 27.0 41.0 33 35.69848016865225 38.0 34.0 40.0 27.0 41.0 34 35.721508064911504 38.0 34.0 40.0 28.0 41.0 35 35.594616855419915 38.0 34.0 40.0 27.0 41.0 36 35.605211550718245 38.0 34.0 40.0 28.0 41.0 37 35.66927489336667 38.0 34.0 40.0 28.0 41.0 38 35.58064911506594 38.0 34.0 40.0 27.0 41.0 39 35.22279256753444 38.0 34.0 40.0 26.0 41.0 40 34.87053488258077 38.0 33.0 40.0 26.0 41.0 41 34.84206010687846 38.0 33.0 40.0 25.0 41.0 42 34.676192577339805 38.0 33.0 40.0 24.0 41.0 43 33.497730058341915 36.0 31.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 14.0 10 20.0 11 13.0 12 14.0 13 20.0 14 14.0 15 11.0 16 6.0 17 9.0 18 12.0 19 31.0 20 66.0 21 96.0 22 177.0 23 409.0 24 714.0 25 1059.0 26 1648.0 27 2429.0 28 3231.0 29 4286.0 30 5381.0 31 6811.0 32 8390.0 33 10472.0 34 13067.0 35 17495.0 36 22710.0 37 31827.0 38 43718.0 39 29818.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.02549394518802 24.684022160121586 17.547188312006668 27.74329558268373 2 11.01534539393048 19.736725989116046 44.83845663577977 24.409471981173702 3 12.732754816884837 31.673775555228712 37.42216992695005 18.171299700936412 4 8.61646320537334 21.844879148894446 26.169044467323626 43.36961317840859 5 12.791586998087952 37.45207628572829 30.86385252733245 18.892484188851302 6 24.586458792959746 36.91915477766338 15.312545962641567 23.181840466735302 7 20.20150022062068 35.13163700544198 14.469774966906899 30.19708780703045 8 26.56567142226798 28.572339069471003 25.614060891307545 19.247928616953473 9 18.741971858606657 10.981026621561995 13.40834436436731 56.86865715546404 10 14.887483453449038 26.691180075501297 27.40991322253273 31.01142324851694 11 28.4723243614257 18.71794871794872 23.048487522674904 29.76123939795068 12 17.62317987939403 26.88924841888513 19.439133205863605 36.04843849585723 13 36.77060352012551 14.625189978918469 23.977055449330784 24.62715105162524 14 22.67784478109526 26.21611021228612 19.808305142913174 31.29773986370545 15 29.809285679266555 23.891748786586263 16.50242682747463 29.79653870667255 16 30.972201794381526 20.8339461685542 16.095994508996423 32.097857528067856 17 17.561406089130756 36.18326224444771 16.429376869147426 29.825954797274107 18 30.29612197872236 14.931607589351376 18.937588861107024 35.834681570819235 19 29.62102269941658 25.235573858900818 18.878266411727214 26.265137029955387 20 22.009609256263175 18.478697847722707 19.29891650732951 40.21277638868461 21 37.43246555866059 16.838260528509092 21.478648820905036 24.250625091925283 22 17.41285483159288 38.53164681080551 25.093396087659954 18.962102269941656 23 30.546158748835612 21.795362063048486 19.91077119184194 27.747707996273963 24 35.312055694464874 23.7824189831838 23.791734078540962 17.113791243810365 25 18.044810511349706 29.919596019022404 25.649360200029413 26.38623326959847 26 38.85375300289258 25.436093543168113 20.16473010736873 15.545423346570574 27 17.994312889150365 30.511839976467126 28.12472422415061 23.369122910231894 28 24.54037358435064 22.860714811001618 25.795950384860518 26.802961219787225 29 29.734274648232585 18.124724224150608 29.12291023189685 23.018090895719958 30 16.648036475952345 25.50718242878855 32.23856449477864 25.606216600480465 31 37.17997744766387 19.88527724665392 19.850468206108744 23.084277099573466 32 20.866303868215912 20.83786831396774 41.169289601411975 17.126538216404374 33 16.63381869882826 34.397215276756384 31.043290680001963 17.925675344413396 34 24.524685002696476 30.10050497622199 23.953522576849537 21.421287444231996 35 17.912928371819387 18.831690934941413 46.70147570721184 16.553904986027355 36 22.670000490268176 27.15742511153601 20.713340197087806 29.45923420110801 37 21.02613129381772 25.075256165122322 29.45923420110801 24.439378339951954 38 20.17747707996274 16.48085502770015 31.25018385056626 32.091484041770855 39 29.943619159680345 18.635583664264352 24.305044859538167 27.115752316517135 40 17.204000588321815 17.058881208020786 43.99862724910526 21.73849095455214 41 24.044712457714372 21.937539834289357 22.504780114722752 31.512967593273522 42 24.350149531793893 16.553904986027355 37.46041084473207 21.635534637446682 43 25.149776927979605 16.80100014708045 33.36961317840859 24.67960974653135 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 1.0 2 2.0 3 37.0 4 72.0 5 72.0 6 111.0 7 150.0 8 166.5 9 183.0 10 289.0 11 395.0 12 395.0 13 626.5 14 858.0 15 2217.0 16 3576.0 17 3608.0 18 3640.0 19 3640.0 20 2963.0 21 2286.0 22 1775.5 23 1265.0 24 1200.0 25 1135.0 26 1135.0 27 1104.5 28 1074.0 29 1093.5 30 1113.0 31 1148.5 32 1184.0 33 1184.0 34 1499.0 35 1814.0 36 1788.5 37 1763.0 38 2007.0 39 2251.0 40 2251.0 41 2934.5 42 3618.0 43 4837.5 44 6057.0 45 8278.0 46 10499.0 47 10499.0 48 14989.5 49 19480.0 50 33114.0 51 46748.0 52 32945.5 53 19143.0 54 19143.0 55 27593.0 56 36043.0 57 29359.5 58 22676.0 59 14849.5 60 7023.0 61 7023.0 62 5715.5 63 4408.0 64 3452.0 65 2496.0 66 2070.5 67 1645.0 68 1645.0 69 1270.0 70 895.0 71 613.5 72 332.0 73 206.0 74 80.0 75 80.0 76 54.0 77 28.0 78 22.5 79 17.0 80 15.0 81 13.0 82 13.0 83 9.0 84 5.0 85 3.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 203970.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.499289111143796 #Duplication Level Percentage of deduplicated Percentage of total 1 71.66141043648796 13.25685149776928 2 10.860519969257679 4.0182379761729665 3 4.661701958497867 2.5871451684071185 4 2.530941086051997 1.8728244349659264 5 1.5371160522619458 1.4217777124086874 6 1.2429438422600907 1.3796146492131196 7 0.8719158296451381 1.1290876109231751 8 0.6519492221662736 0.9648477717311369 9 0.5538918188323219 0.9221944403588762 >10 4.433784750748682 16.36221012894053 >50 0.6121962208146715 7.910967299112615 >100 0.32067421090292314 11.464431043780948 >500 0.029152200991174836 3.7863411285973427 >1k 0.021201600720854422 9.140069618081089 >5k 0.002650200090106803 3.725547874687454 >10k+ 0.007950600270320409 20.057851644849734 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGT 15282 7.492278276217091 No Hit ATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATG 14526 7.121635534637447 No Hit TCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTT 11104 5.443937833995196 TruSeq Adapter, Index 12 (95% over 22bp) ACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCC 7599 3.725547874687454 No Hit CTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTTC 4623 2.266509780850125 RNA PCR Primer, Index 12 (95% over 23bp) CATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTC 3603 1.7664362406236211 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2416 1.1844879148894445 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2281 1.1183017110359368 No Hit CACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCG 1789 0.8770897681031524 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1417 0.6947100063734863 No Hit TTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTA 1375 0.6741187429523949 No Hit TATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTAT 1139 0.5584154532529293 No Hit ACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGT 939 0.4603618179143992 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 923 0.4525175270873168 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 873 0.4280041182526842 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 827 0.40545178212482225 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 735 0.3603471098690984 No Hit GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT 603 0.29563171054566845 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 603 0.29563171054566845 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 595 0.29170956513212726 No Hit CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG 558 0.27356964259449923 No Hit TCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC 546 0.26768642447418733 No Hit GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 521 0.2554297200568711 No Hit ATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCT 398 0.19512673432367506 TruSeq Adapter, Index 12 (95% over 21bp) GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC 398 0.19512673432367506 No Hit GTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGG 393 0.19267539344021178 No Hit CGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTG 377 0.18483110261312938 No Hit TCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTTCT 374 0.18336029808305143 TruSeq Adapter, Index 12 (95% over 24bp) GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGT 369 0.18090895719958816 No Hit GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAG 355 0.17404520272589105 No Hit GAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTG 355 0.17404520272589105 No Hit GCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGG 352 0.1725743981958131 No Hit GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG 350 0.1715938618424278 No Hit GCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCG 347 0.17012305731234986 No Hit GAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCG 338 0.165710643722116 No Hit GGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATG 333 0.16325930283865275 No Hit GTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTG 331 0.16227876648526743 No Hit ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA 326 0.15982742560180419 No Hit GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC 325 0.15933715742511154 No Hit ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG 310 0.15198313477472178 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 302 0.14806098936118056 No Hit GGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAG 295 0.144629112124332 No Hit ATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTG 292 0.14315830759425408 No Hit GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA 289 0.1416875030641761 No Hit GGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAA 288 0.14119723488748345 No Hit TCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAG 287 0.1407069667107908 No Hit GTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAC 276 0.13531401676717164 No Hit CTTTACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTA 271 0.1328626758837084 No Hit CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGG 269 0.1318821395303231 No Hit AAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGT 269 0.1318821395303231 No Hit GAGATGTGTATAAGAGACAGACACATCTCCGAGCCCACGAGAC 258 0.1264891895867039 No Hit GTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTC 258 0.1264891895867039 No Hit CGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCT 242 0.11864489875962152 No Hit ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTA 241 0.11815463058292887 No Hit GATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCC 236 0.11570328969946561 No Hit CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT 234 0.11472275334608031 No Hit GTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAA 233 0.11423248516938765 No Hit TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACAC 219 0.10736873069569054 No Hit CACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGG 217 0.10638819434230523 No Hit CATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCC 212 0.10393685345884199 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 208 0.10197578075207138 No Hit GATTCAGGCTCTGGGCTGCTCCCCGTTCGCTCGCCGCTACTGG 207 0.10148551257537874 No Hit GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTC 206 0.1009952443986861 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 9.805363533853017E-4 0.0 11 0.0 0.0 0.0 9.805363533853017E-4 0.0 12 0.0 0.0 0.0 9.805363533853017E-4 0.0 13 0.0 0.0 0.0 0.0014708045300779527 0.0 14 0.0 0.0 0.0 0.0014708045300779527 0.0 15 0.0 0.0 0.0 0.0014708045300779527 0.0 16 0.0 0.0 0.0 0.0019610727067706033 0.0 17 0.0 0.0 0.0 0.0024513408834632546 0.0 18 0.0 0.0 0.0 0.0024513408834632546 0.0 19 0.0 0.0 0.0 0.0024513408834632546 0.0 20 0.0 0.0 0.0 0.0029416090601559054 0.0 21 0.0 0.0 0.0 0.004412413590233858 0.0 22 0.0 0.0 0.0 0.004902681766926509 0.0 23 0.0 0.0 0.0 0.0068637544736971125 0.0 24 0.0 0.0 0.0 0.007844290827082413 0.0 25 0.0 0.0 0.0 0.007844290827082413 0.0 26 0.0 0.0 0.0 0.008824827180467716 0.0 27 0.0 0.0 0.0 0.009315095357160366 0.0 28 0.0 0.0 0.0 0.02745501789478845 0.0 29 0.0 0.0 0.0 0.05245869490611364 0.0 30 0.0 0.0 0.0 0.0848163945678286 0.0 31 0.0 0.0 0.0 0.1387458940040202 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAACGC 20 0.0018383889 37.0 3 ACAGACA 50 1.7826096E-10 37.0 17 ACGCATC 30 8.278477E-6 37.0 1 GACAGAC 50 1.7826096E-10 37.0 16 ATTACGG 20 0.0018383889 37.0 2 TCAGAGT 30 8.278477E-6 37.0 3 GATTACG 20 0.0018383889 37.0 1 CGCATCT 30 8.278477E-6 37.0 2 TGTGCAA 20 0.0018383889 37.0 10 TTACGGG 20 0.0018383889 37.0 3 CTTATAC 1765 0.0 35.847023 1 TTATACA 1875 0.0 33.744003 2 CAGACAC 55 4.947651E-10 33.636364 18 AGACAGA 55 4.947651E-10 33.636364 15 CGTCTTC 580 0.0 32.853447 37 ACTCAGA 35 2.3787577E-5 31.714285 1 TATACAC 2040 0.0 31.105392 3 GAGACAG 60 1.2569217E-9 30.833334 14 ACACGAA 25 0.0054858793 29.6 17 GATATGT 25 0.0054858793 29.6 1 >>END_MODULE