ERR1631051.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631051.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	800084
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGT	10891	1.3612320706325836	No Hit
ATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATG	8770	1.0961349058348873	No Hit
TCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTT	7201	0.9000304967978363	TruSeq Adapter, Index 1 (95% over 22bp)
ACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCC	4344	0.5429429909859464	No Hit
CTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTCTTC	2438	0.304718004609516	RNA PCR Primer, Index 1 (95% over 23bp)
CATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCGTC	1996	0.2494738052504487	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1767	0.2208518105598912	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1514	0.1892301308362622	No Hit
CACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTATGCCG	1109	0.13861044590318017	No Hit
GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG	1070	0.13373595772443894	No Hit
TTATACACATCTCCGAGCCCACGAGACATCTCAGGATCTCGTA	928	0.11598782127876574	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATTACG	70	0.0	34.357143	1
CTTATAC	1535	0.0	31.938114	1
TTATACA	1600	0.0	30.756252	2
GGTATCA	405	0.0	29.234568	1
TATACAC	1730	0.0	28.658958	3
CGTCTTC	375	0.0	27.626665	37
ACGTGGG	70	6.5865606E-9	26.42857	36
GCAACGC	50	9.086576E-6	25.900002	3
GTATCAA	1270	0.0	24.181103	1
CCGTCTT	1080	0.0	24.152779	37
GCCGTCT	1120	0.0	23.455357	36
GTTATAC	50	2.7011067E-4	22.2	1
CGGCCTT	100	1.2883902E-8	20.35	24
TTACGGG	110	1.7516868E-9	20.181818	3
AGCAACG	75	9.2599985E-6	19.733334	2
ATCGCTC	105	2.2568202E-8	19.380953	8
TGCCGTC	1385	0.0	18.833935	35
TCGCCAT	100	2.8722025E-7	18.5	13
AACCGCC	100	2.8722025E-7	18.5	34
AGGACCG	50	0.007033057	18.5	5