##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631040.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 688953 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227584465123165 31.0 31.0 34.0 28.0 34.0 2 31.264546347864076 31.0 31.0 34.0 28.0 34.0 3 30.700506420612147 31.0 31.0 34.0 26.0 34.0 4 34.86230991083572 37.0 35.0 37.0 32.0 37.0 5 35.04749235434057 37.0 35.0 37.0 32.0 37.0 6 35.25195042332351 37.0 35.0 37.0 32.0 37.0 7 35.25271244918013 37.0 35.0 37.0 32.0 37.0 8 35.29849496264622 37.0 35.0 37.0 32.0 37.0 9 37.05434042670545 39.0 37.0 39.0 33.0 39.0 10 36.850728569292826 39.0 37.0 39.0 33.0 39.0 11 36.91587524838414 39.0 37.0 39.0 33.0 39.0 12 36.83141230243572 39.0 37.0 39.0 33.0 39.0 13 36.93206648349017 39.0 37.0 39.0 33.0 39.0 14 37.98004653437898 40.0 37.0 41.0 33.0 41.0 15 37.99625228426322 40.0 37.0 41.0 33.0 41.0 16 37.97056257828908 40.0 37.0 41.0 33.0 41.0 17 37.90428664945214 40.0 37.0 41.0 33.0 41.0 18 37.98209747254167 40.0 37.0 41.0 33.0 41.0 19 37.98000734447778 40.0 37.0 41.0 33.0 41.0 20 38.009923753870005 40.0 37.0 41.0 33.0 41.0 21 37.98633578778233 40.0 37.0 41.0 33.0 41.0 22 37.88207178138422 40.0 37.0 41.0 33.0 41.0 23 37.918718693437725 40.0 37.0 41.0 33.0 41.0 24 37.82840774334389 40.0 37.0 41.0 33.0 41.0 25 37.77533590825499 39.0 37.0 41.0 33.0 41.0 26 37.66329778664147 39.0 37.0 41.0 32.0 41.0 27 37.551230635471505 39.0 37.0 41.0 32.0 41.0 28 37.602283464909796 39.0 37.0 41.0 32.0 41.0 29 37.5165635391674 39.0 37.0 41.0 32.0 41.0 30 37.457298248211416 39.0 37.0 40.0 32.0 41.0 31 37.46947759861703 39.0 37.0 40.0 32.0 41.0 32 37.338753151521225 39.0 36.0 40.0 32.0 41.0 33 37.299664853770864 39.0 36.0 40.0 31.0 41.0 34 37.225212750361784 39.0 36.0 40.0 31.0 41.0 35 37.22896627200985 39.0 36.0 40.0 31.0 41.0 36 37.20133013427621 39.0 36.0 40.0 31.0 41.0 37 37.15655784937434 39.0 36.0 40.0 31.0 41.0 38 37.1290000914431 39.0 36.0 40.0 31.0 41.0 39 37.00952169451327 39.0 36.0 40.0 31.0 41.0 40 36.88550162347794 39.0 36.0 40.0 30.0 41.0 41 36.86993887826891 39.0 36.0 40.0 30.0 41.0 42 36.81649111042408 39.0 36.0 40.0 30.0 41.0 43 36.08373575555952 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 16.0 10 26.0 11 22.0 12 20.0 13 15.0 14 17.0 15 15.0 16 15.0 17 18.0 18 29.0 19 45.0 20 92.0 21 187.0 22 310.0 23 650.0 24 992.0 25 1839.0 26 2941.0 27 4441.0 28 6657.0 29 9653.0 30 12974.0 31 17373.0 32 22637.0 33 29190.0 34 38244.0 35 51113.0 36 71554.0 37 104463.0 38 174957.0 39 138442.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.6367604176192 23.40928916776616 16.083680599402282 25.87026981521236 2 12.639323727453105 21.373301226643907 42.121305807507916 23.86606923839507 3 14.031000663325365 28.416597358600658 35.790540138441955 21.761861839632022 4 11.208602038165157 20.162333279628655 35.77123548340743 32.857829198798754 5 12.374719320476142 37.77050103562943 35.862968881766975 13.99181076212746 6 27.101558451737635 40.123782028672494 17.481744037691975 15.292915481897895 7 23.06630495839339 34.40075012373848 21.81222812006044 20.720716797807686 8 24.488898371877326 35.3082140581433 22.844664294951905 17.358223275027466 9 22.145487428024843 14.925546445113092 19.08243377995306 43.84653234690901 10 13.655793646300982 28.928533586471065 33.31330293938774 24.102369827840214 11 29.625097793318268 22.600235429702753 25.791164273905476 21.983502503073503 12 18.81899055523381 26.520096436186503 28.575389032343278 26.08552397623641 13 29.19502491461682 20.04374754155944 26.912430891512194 23.848796652311552 14 21.321483468393346 23.559662270140343 25.297081223247446 29.82177303821886 15 23.969559607113982 29.149738806565907 21.518739304422798 25.361962281897316 16 26.028045454479475 27.395192415157492 22.651037153477812 23.925724976885217 17 19.303784147830115 32.918646119546615 24.188152167128962 23.58941756549431 18 23.635429412456293 24.748132310912354 24.73840740950399 26.878030867127368 19 21.620487899755137 27.665602733423032 25.935150873862224 24.778758492959607 20 20.37076549488862 25.574748930623713 27.074560964245748 26.979924610241916 21 23.56183948687356 24.677880784320553 25.682448585026847 26.07783114377904 22 19.515845057645443 31.245817929524943 27.965623199260325 21.272713813569286 23 22.117909349404098 24.37350588501683 26.098877572200134 27.409707193378942 24 22.577156932330652 28.504556914622626 27.953575933336527 20.9647102197102 25 19.838944020854836 30.182174981457372 25.999015898036586 23.97986509965121 26 22.44362097269335 26.023691021013047 25.46080792158536 26.071880084708244 27 19.446028974400285 30.658695150467448 29.719298703975454 20.175977171156813 28 19.319750403873705 24.29106194471902 27.637589211455644 28.751598439951636 29 19.46112434375059 25.11985578116359 30.04268796274927 25.376331912336546 30 19.54443917074169 25.557331196757975 31.155100565640907 23.74312906685942 31 21.091279085801208 24.152881256050847 27.549629655433677 27.206210002714265 32 21.671870214659055 28.25272551248053 30.30714722194402 19.76825705091639 33 19.371132718777623 25.655741393099383 28.986737847139064 25.986388040983925 34 20.144480102416278 29.415068952453943 29.441921292163613 20.998529652966166 35 20.667883005081624 27.546581552007176 31.89433822045916 19.89119722245204 36 22.44986232732857 25.30288713453603 24.469884012407235 27.77736652572817 37 20.972693347731994 27.164552589218715 28.374504501758462 23.48824956129083 38 21.537463368328464 24.344766624138366 29.262228337782116 24.85554166975106 39 24.732166054868763 25.14844989425984 26.449844909594706 23.66953914127669 40 19.928209906916727 23.884938450082952 34.20305884436239 21.983792798637932 41 21.833564844045966 26.187127423786528 26.15258225161949 25.826725480548017 42 22.36814412594183 24.208763152203417 31.94209184080772 21.481000881047038 43 22.289619175763804 23.862295396057494 30.84738726734625 23.000698160832453 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 13.0 1 13.5 2 14.0 3 65.0 4 116.0 5 116.0 6 150.0 7 184.0 8 209.0 9 234.0 10 309.0 11 384.0 12 384.0 13 616.5 14 849.0 15 1783.5 16 2718.0 17 3252.5 18 3787.0 19 3787.0 20 4315.0 21 4843.0 22 6419.0 23 7995.0 24 10568.0 25 13141.0 26 13141.0 27 16254.5 28 19368.0 29 21989.5 30 24611.0 31 28120.0 32 31629.0 33 31629.0 34 34412.5 35 37196.0 36 39171.0 37 41146.0 38 42659.5 39 44173.0 40 44173.0 41 45045.0 42 45917.0 43 45484.0 44 45051.0 45 44603.0 46 44155.0 47 44155.0 48 45430.5 49 46706.0 50 62257.0 51 77808.0 52 57537.5 53 37267.0 54 37267.0 55 48257.5 56 59248.0 57 50391.5 58 41535.0 59 30498.5 60 19462.0 61 19462.0 62 16825.5 63 14189.0 64 11867.5 65 9546.0 66 7989.0 67 6432.0 68 6432.0 69 5217.5 70 4003.0 71 3202.0 72 2401.0 73 1859.0 74 1317.0 75 1317.0 76 1021.0 77 725.0 78 571.0 79 417.0 80 312.0 81 207.0 82 207.0 83 151.5 84 96.0 85 69.5 86 43.0 87 28.5 88 14.0 89 14.0 90 11.5 91 9.0 92 5.5 93 2.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 688953.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.43865329850573 #Duplication Level Percentage of deduplicated Percentage of total 1 77.50162557389434 44.51589001409522 2 13.868112724171125 15.931314373365222 3 4.2472233106017185 7.318643616569514 4 1.7252922404977162 3.96393851362202 5 0.8488015396772131 2.437700867837865 6 0.46845360246394374 1.6144406435017498 7 0.2988751091013316 1.2016888639857122 8 0.20188323565020963 0.9276720943434338 9 0.1372328179597212 0.7094221426768839 >10 0.6594245540959156 6.68568560993837 >50 0.03123590865739647 1.2407108312311808 >100 0.00806085666690326 0.731258129200663 >500 7.557053124954046E-4 0.293863328130577 >1k 0.0015114106249908092 1.345462869663336 >5k 7.557053124954046E-4 3.2397310586763908 >10k+ 7.557053124954046E-4 7.842577043161823 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGT 20440 2.9668206684635963 No Hit ATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATG 17145 2.488558726066945 No Hit TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT 16618 2.412065844839924 RNA PCR Primer, Index 39 (95% over 23bp) ACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCC 8670 1.2584312717993826 No Hit CTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTC 8494 1.2328852621296373 RNA PCR Primer, Index 39 (95% over 24bp) CATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTC 5227 0.7586874576349911 RNA PCR Primer, Index 39 (95% over 21bp) CACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCG 1967 0.2855056876158461 No Hit TTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTA 1866 0.27084576161218543 No Hit TATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTAT 1509 0.21902800336162262 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1478 0.21452842211297432 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1367 0.1984170182871691 No Hit ACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGT 1112 0.16140433382248134 No Hit TCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTCT 804 0.11669881690042716 Illumina PCR Primer Index 11 (95% over 24bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.4514778221446164E-4 0.0 5 0.0 0.0 0.0 1.4514778221446164E-4 0.0 6 0.0 0.0 0.0 1.4514778221446164E-4 0.0 7 0.0 0.0 0.0 1.4514778221446164E-4 0.0 8 0.0 0.0 0.0 2.902955644289233E-4 0.0 9 0.0 0.0 0.0 7.257389110723083E-4 0.0 10 0.0 0.0 0.0 0.0010160344755012316 0.0 11 0.0 0.0 0.0 0.0010160344755012316 0.0 12 0.0 0.0 0.0 0.0010160344755012316 0.0 13 0.0 0.0 0.0 0.0010160344755012316 0.0 14 0.0 0.0 0.0 0.0010160344755012316 0.0 15 0.0 0.0 0.0 0.0010160344755012316 0.0 16 0.0 0.0 0.0 0.0010160344755012316 0.0 17 0.0 0.0 0.0 0.0010160344755012316 0.0 18 0.0 0.0 0.0 0.0011611822577156932 0.0 19 0.0 0.0 0.0 0.0011611822577156932 0.0 20 0.0 0.0 0.0 0.0015966256043590781 0.0 21 0.0 0.0 0.0 0.00174177338657354 0.0 22 0.0 0.0 0.0 0.00174177338657354 0.0 23 0.0 0.0 0.0 0.0018869211687880015 0.0 24 0.0 0.0 0.0 0.0024675122976458483 0.0 25 0.0 0.0 0.0 0.00261266007986031 0.0 26 0.0 0.0 0.0 0.00261266007986031 0.0 27 0.0 0.0 0.0 0.00348354677314708 0.0 28 0.0 0.0 0.0 0.008128275804009853 0.0 29 0.0 0.0 0.0 0.01770802943016432 0.0 30 0.0 0.0 0.0 0.03164221652275264 0.0 31 0.0 0.0 0.0 0.06676797981865236 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2535 0.0 34.44576 1 TTATACA 2770 0.0 31.790611 2 TATACAC 2970 0.0 29.898989 3 GCAGCGT 25 0.005494834 29.6 13 CGTCTTC 960 0.0 29.484373 37 CCGTCTT 2730 0.0 24.463367 37 GCCGTCT 2805 0.0 23.809269 36 GGTATCA 360 0.0 22.611113 1 GTATCAA 750 0.0 21.953333 1 TCGGAAT 55 5.14022E-4 20.181818 26 TGCCGTC 3350 0.0 19.93582 35 ATGCCGT 3450 0.0 19.357971 34 ATACACA 4840 0.0 18.652893 4 CCTAATA 80 1.6151396E-5 18.5 2 CAAGCGT 50 0.007032091 18.5 16 GCTCCGA 50 0.007032091 18.5 3 TAGTACG 70 1.21829755E-4 18.5 4 TGTCCGA 50 0.007032091 18.5 1 TAATCGG 50 0.007032091 18.5 23 TATGCCG 3655 0.0 18.424078 33 >>END_MODULE