##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631019.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1075971 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45591749220007 31.0 31.0 34.0 28.0 34.0 2 31.44513560309711 31.0 31.0 34.0 28.0 34.0 3 30.87637306209926 31.0 31.0 34.0 27.0 34.0 4 35.03627328245835 37.0 35.0 37.0 32.0 37.0 5 35.26745795193365 37.0 35.0 37.0 33.0 37.0 6 35.46653023176275 37.0 35.0 37.0 33.0 37.0 7 35.48676126029419 37.0 35.0 37.0 33.0 37.0 8 35.50708058116808 37.0 35.0 37.0 33.0 37.0 9 37.26974054133429 39.0 37.0 39.0 34.0 39.0 10 37.08967899692464 39.0 37.0 39.0 33.0 39.0 11 37.165145714893804 39.0 37.0 39.0 33.0 39.0 12 37.096207053907584 39.0 37.0 39.0 33.0 39.0 13 37.16489756694186 39.0 37.0 39.0 33.0 39.0 14 38.318857106743586 40.0 38.0 41.0 34.0 41.0 15 38.319610844530196 40.0 38.0 41.0 34.0 41.0 16 38.33245412748113 40.0 38.0 41.0 34.0 41.0 17 38.31199260946624 40.0 38.0 41.0 33.0 41.0 18 38.33583990646588 40.0 38.0 41.0 34.0 41.0 19 38.375962735055126 40.0 38.0 41.0 34.0 41.0 20 38.37383070733319 40.0 38.0 41.0 34.0 41.0 21 38.33528784697729 40.0 38.0 41.0 34.0 41.0 22 38.28747243187781 40.0 38.0 41.0 34.0 41.0 23 38.26378034352227 40.0 38.0 41.0 34.0 41.0 24 38.23482045519814 40.0 38.0 41.0 34.0 41.0 25 38.21344534378715 40.0 38.0 41.0 34.0 41.0 26 38.11472614038854 40.0 37.0 41.0 33.0 41.0 27 38.05646806465973 40.0 37.0 41.0 33.0 41.0 28 38.02652394906554 40.0 37.0 41.0 33.0 41.0 29 37.96298320307889 40.0 37.0 41.0 33.0 41.0 30 37.888207953560084 40.0 37.0 41.0 33.0 41.0 31 37.869319898026994 40.0 37.0 41.0 33.0 41.0 32 37.79280389527227 40.0 37.0 41.0 33.0 41.0 33 37.77711016374977 40.0 37.0 41.0 33.0 41.0 34 37.70779695735294 40.0 37.0 41.0 33.0 41.0 35 37.68385950922469 40.0 37.0 41.0 33.0 41.0 36 37.65827517656145 40.0 37.0 41.0 33.0 41.0 37 37.58993597411083 40.0 37.0 41.0 32.0 41.0 38 37.562868330094396 40.0 37.0 41.0 32.0 41.0 39 37.514051958649446 40.0 37.0 41.0 32.0 41.0 40 37.46597724288108 40.0 37.0 41.0 32.0 41.0 41 37.411923741439125 39.0 37.0 41.0 32.0 41.0 42 37.361919605639926 39.0 37.0 41.0 32.0 41.0 43 36.78162515532482 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 4.0 11 8.0 12 7.0 13 6.0 14 6.0 15 4.0 16 6.0 17 10.0 18 15.0 19 39.0 20 85.0 21 155.0 22 334.0 23 624.0 24 1168.0 25 2079.0 26 3346.0 27 5484.0 28 8193.0 29 12150.0 30 16771.0 31 22647.0 32 29895.0 33 39502.0 34 52534.0 35 71295.0 36 100300.0 37 150512.0 38 265011.0 39 293774.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.08683412471154 22.521517773248537 15.09826937714864 23.293378724891284 2 13.703808002260285 23.172278806770816 41.05008406360394 22.07382912736496 3 14.851608454131199 28.834792015769946 34.06141987098165 22.252179659117207 4 11.685630932432193 19.256002252848823 40.77293904761374 28.285427767105247 5 12.169658847682697 38.82911342406069 36.4166878103592 12.584539917897416 6 27.022010816276648 41.541361244866266 18.31694348639508 13.119684452462007 7 24.1496285680562 33.770333958814874 24.335042487204582 17.744994985924343 8 24.011427817292475 36.5350924885522 22.146228848175276 17.30725084598005 9 24.592205552008373 15.807024538765448 21.277896894990665 38.32287301423551 10 13.964874517993515 29.761582793588303 34.76487749205137 21.508665196366817 11 31.817121465169603 24.209667360923294 25.83824285227018 18.134968321636922 12 20.793961919048005 26.787617881894587 31.61535022784071 20.803069971216694 13 27.77955911451145 22.576723722107754 27.405013703900945 22.238703459479854 14 20.922125224564603 22.301344552966576 28.82884390006794 27.947686322400884 15 22.379134753631835 30.172188655642206 24.602335936563346 22.84634065416261 16 22.651261046998478 29.23378046434337 25.354214937019677 22.760743551638473 17 20.834297578652215 29.869857087226325 27.076566189980955 22.2192791441405 18 22.729701822818647 27.8237982250451 27.78903892391152 21.657461028224738 19 23.1455122861118 28.31916473585255 27.59507458844151 20.940248389594142 20 22.55153716968208 27.530667648105755 27.626023377953494 22.291771804258666 21 22.98602843385184 27.361518107830047 28.030681124305396 21.62177233401272 22 21.802725166384597 29.09307035226786 27.862646855723806 21.241557625623738 23 22.077453760370865 27.727327223503234 28.09443748948624 22.10078152663966 24 22.556091195766427 28.28737949256997 27.456502080446406 21.7000272312172 25 21.794639446602186 28.390542124276585 27.604461458533734 22.210356970587497 26 22.985563737312624 28.227526578318564 27.696192555375564 21.09071712899325 27 21.8918539626068 28.623448029733144 27.60455439784158 21.880143609818482 28 21.506899349517784 27.852423531860985 28.538780320287444 22.101896798333783 29 22.618639349945305 28.09415867156271 27.67026248848714 21.616939490004842 30 21.57799792001829 28.057354705656568 28.028543520224986 22.336103854100156 31 23.150252190811834 27.158073962959968 28.142951808180705 21.548722038047494 32 22.222067323375818 27.565612827855023 28.188492069024164 22.02382777974499 33 21.86815443910663 28.017204924668043 28.80904782749721 21.305592808728115 34 22.313519602294114 27.899264943014263 27.949730987173442 21.837484467518177 35 21.567588717539785 27.451390418514997 29.22197717224721 21.75904369169801 36 23.19486305857686 27.287631358094224 27.268578799986244 22.248926783342675 37 21.889995176449922 27.665801401710645 28.43821998920045 22.005983432638985 38 21.71842921417027 27.349807755041727 28.390728002892274 22.541035027895735 39 22.348743599966912 27.269787010988217 28.184123921555504 22.197345467489367 40 21.469816565688106 26.949796974082012 29.9797113490977 21.60067511113218 41 21.853841785698684 27.05370312025138 28.06088639935463 23.031568694695302 42 21.840086768137805 26.925818632658316 29.124669716934747 22.10942488226913 43 21.997154198393822 26.58092086124998 29.22346420117271 22.19846073918349 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 22.0 2 29.0 3 108.0 4 187.0 5 187.0 6 224.5 7 262.0 8 271.5 9 281.0 10 442.5 11 604.0 12 604.0 13 989.5 14 1375.0 15 3135.0 16 4895.0 17 5981.0 18 7067.0 19 7067.0 20 7934.5 21 8802.0 22 11501.0 23 14200.0 24 18458.0 25 22716.0 26 22716.0 27 28481.5 28 34247.0 29 40730.0 30 47213.0 31 52900.0 32 58587.0 33 58587.0 34 63783.0 35 68979.0 36 72351.0 37 75723.0 38 78350.5 39 80978.0 40 80978.0 41 82408.0 42 83838.0 43 82545.5 44 81253.0 45 79915.0 46 78577.0 47 78577.0 48 75800.5 49 73024.0 50 69868.0 51 66712.0 52 70004.5 53 73297.0 54 73297.0 55 62896.5 56 52496.0 57 50347.0 58 48198.0 59 41494.5 60 34791.0 61 34791.0 62 28042.0 63 21293.0 64 17910.5 65 14528.0 66 11871.5 67 9215.0 68 9215.0 69 7387.5 70 5560.0 71 4463.0 72 3366.0 73 2612.5 74 1859.0 75 1859.0 76 1373.0 77 887.0 78 660.5 79 434.0 80 339.5 81 245.0 82 245.0 83 184.5 84 124.0 85 94.5 86 65.0 87 49.5 88 34.0 89 34.0 90 23.5 91 13.0 92 7.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1075971.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.57785421750225 #Duplication Level Percentage of deduplicated Percentage of total 1 79.11678674146648 47.13608386640305 2 12.69692141220611 15.129106658149968 3 3.677380853639995 6.572713812011928 4 1.4974356667534465 3.568560154157005 5 0.7509208004245186 2.236912498829103 6 0.47367175536911743 1.6932208072997799 7 0.29033079053566696 1.2108099859370303 8 0.2255188292608567 1.0748742346404083 9 0.16989531917224698 0.9109798702092131 >10 0.9845172374119183 10.932917707577905 >50 0.08423048570968489 3.4054752233288204 >100 0.03019947406728697 2.8685897639880014 >500 7.823692795615588E-4 0.3178930412550409 >1k 0.0010953169913861824 1.6629255336971909 >5k 3.129477118246235E-4 1.2789368425155152 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGT 7591 0.7055022858422765 No Hit ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATG 6128 0.5695320784667988 No Hit TCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT 4516 0.41971391422259524 TruSeq Adapter, Index 5 (95% over 21bp) ACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCC 3337 0.31013847027475644 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3106 0.28866949016283894 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2700 0.25093613117825664 No Hit CATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTC 1634 0.15186282901676718 No Hit CTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTTC 1477 0.13727135768529078 Illumina Paired End PCR Primer 2 (95% over 23bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 9.293930784379876E-5 0.0 4 0.0 0.0 0.0 1.8587861568759753E-4 0.0 5 0.0 0.0 0.0 1.8587861568759753E-4 0.0 6 0.0 0.0 0.0 1.8587861568759753E-4 0.0 7 0.0 0.0 0.0 1.8587861568759753E-4 0.0 8 0.0 0.0 0.0 1.8587861568759753E-4 0.0 9 0.0 0.0 0.0 1.8587861568759753E-4 0.0 10 0.0 0.0 0.0 1.8587861568759753E-4 9.293930784379876E-5 11 0.0 0.0 0.0 2.7881792353139627E-4 9.293930784379876E-5 12 0.0 0.0 0.0 2.7881792353139627E-4 9.293930784379876E-5 13 0.0 0.0 0.0 3.7175723137519506E-4 9.293930784379876E-5 14 0.0 0.0 0.0 3.7175723137519506E-4 9.293930784379876E-5 15 0.0 0.0 0.0 4.646965392189938E-4 9.293930784379876E-5 16 0.0 0.0 0.0 4.646965392189938E-4 1.8587861568759753E-4 17 0.0 0.0 0.0 4.646965392189938E-4 1.8587861568759753E-4 18 0.0 0.0 0.0 4.646965392189938E-4 1.8587861568759753E-4 19 0.0 0.0 0.0 4.646965392189938E-4 1.8587861568759753E-4 20 0.0 0.0 0.0 5.576358470627925E-4 1.8587861568759753E-4 21 0.0 0.0 0.0 8.364537705941889E-4 2.7881792353139627E-4 22 0.0 0.0 0.0 9.293930784379876E-4 2.7881792353139627E-4 23 0.0 0.0 0.0 0.001208211001969384 2.7881792353139627E-4 24 0.0 0.0 0.0 0.001579968233344579 2.7881792353139627E-4 25 0.0 0.0 0.0 0.0016729075411883777 2.7881792353139627E-4 26 0.0 0.0 0.0 0.0018587861568759752 2.7881792353139627E-4 27 0.0 0.0 0.0 0.0029740578510015605 3.7175723137519506E-4 28 0.0 0.0 0.0 0.008643355629473284 3.7175723137519506E-4 29 0.0 0.0 0.0 0.019889011878572935 3.7175723137519506E-4 30 0.0 0.0 0.0 0.03922038791008308 3.7175723137519506E-4 31 0.0 0.0 0.0 0.08931467483789061 3.7175723137519506E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 600 0.0 28.058334 1 CTTATAC 1120 0.0 26.59375 1 CGGCGTA 35 8.869026E-4 26.42857 12 CCGTCTT 725 0.0 24.751722 37 GCCGTCT 725 0.0 24.751722 36 GTATCAA 1885 0.0 24.143234 1 TATACAC 1340 0.0 23.05597 3 GATTACG 65 2.682582E-6 22.76923 1 CGTCTTC 260 0.0 22.057692 37 TTATACA 1395 0.0 22.014336 2 TCGACCC 45 0.0038256524 20.555555 28 TACCGCT 45 0.0038256524 20.555555 33 ATGACGG 55 5.1428E-4 20.181818 20 AGGACCG 65 6.901607E-5 19.923077 5 TAACGGC 95 1.6758713E-7 19.473684 36 TTAACGG 80 1.6165144E-5 18.5 35 TGCCGTC 950 0.0 18.5 35 GCGAGCG 105 4.796548E-7 17.61905 9 AACGGCC 75 2.0671121E-4 17.266666 37 ATGCCGT 1040 0.0 17.076923 34 >>END_MODULE