##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631013.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 382041 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.431618595909864 31.0 30.0 33.0 27.0 34.0 2 30.429846534796003 31.0 30.0 33.0 27.0 34.0 3 29.81660868859625 31.0 30.0 34.0 25.0 34.0 4 34.09613104352674 35.0 33.0 37.0 28.0 37.0 5 33.95470643203216 35.0 33.0 37.0 29.0 37.0 6 34.238403731536664 35.0 35.0 37.0 30.0 37.0 7 34.29471705916381 35.0 35.0 37.0 30.0 37.0 8 34.352629691577604 35.0 35.0 37.0 30.0 37.0 9 35.96051209163414 37.0 35.0 39.0 32.0 39.0 10 35.626966739171976 37.0 35.0 39.0 30.0 39.0 11 35.80447124785036 37.0 35.0 39.0 30.0 39.0 12 35.68538978800704 37.0 35.0 39.0 30.0 39.0 13 35.82923560560254 37.0 35.0 39.0 30.0 39.0 14 36.673058650773086 38.0 36.0 40.0 31.0 41.0 15 36.67986682057685 38.0 36.0 40.0 31.0 41.0 16 36.68706500087687 38.0 36.0 40.0 31.0 41.0 17 36.61929740525232 38.0 36.0 40.0 31.0 41.0 18 36.699013980174904 38.0 36.0 40.0 31.0 41.0 19 36.743278862739864 38.0 36.0 40.0 31.0 41.0 20 36.72686962917592 38.0 36.0 40.0 31.0 41.0 21 36.68829000028793 38.0 36.0 40.0 31.0 41.0 22 36.551815119319656 38.0 35.0 40.0 30.0 41.0 23 36.57268984218971 38.0 35.0 40.0 30.0 41.0 24 36.493693085297124 38.0 35.0 40.0 30.0 41.0 25 36.45078407814868 38.0 35.0 40.0 30.0 41.0 26 36.28688282147728 38.0 35.0 40.0 30.0 41.0 27 36.1615690462542 38.0 35.0 40.0 30.0 41.0 28 36.143662591187855 38.0 35.0 40.0 30.0 41.0 29 36.05532652254601 38.0 34.0 40.0 30.0 41.0 30 35.95260456338456 38.0 34.0 40.0 29.0 41.0 31 35.927683154425836 38.0 34.0 40.0 29.0 41.0 32 35.803591761093706 38.0 34.0 40.0 29.0 41.0 33 35.741915134763026 38.0 34.0 40.0 29.0 41.0 34 35.631696598009114 38.0 34.0 40.0 29.0 41.0 35 35.59173753602362 38.0 34.0 40.0 28.0 41.0 36 35.59406974644083 38.0 34.0 40.0 28.0 41.0 37 35.50905007577721 38.0 34.0 40.0 28.0 41.0 38 35.428511599540364 38.0 34.0 40.0 27.0 41.0 39 35.36752861603859 38.0 34.0 40.0 27.0 41.0 40 35.244785245562646 38.0 34.0 40.0 27.0 41.0 41 35.190194246167295 38.0 33.0 40.0 27.0 41.0 42 35.120400689978304 38.0 33.0 40.0 27.0 41.0 43 34.31434584246193 37.0 33.0 39.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 6.0 11 5.0 12 5.0 13 9.0 14 5.0 15 4.0 16 7.0 17 13.0 18 30.0 19 47.0 20 118.0 21 222.0 22 421.0 23 791.0 24 1225.0 25 2093.0 26 3146.0 27 4610.0 28 6472.0 29 9063.0 30 12066.0 31 15663.0 32 20134.0 33 26029.0 34 33453.0 35 43996.0 36 56272.0 37 66098.0 38 59941.0 39 20092.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.280553657853474 24.49763245306132 16.071835221874093 22.149978667211112 2 15.023518418180249 23.846655201928588 39.539735264016166 21.590091115874998 3 16.542727089500865 29.45390677963883 33.84793778678205 20.155428344078253 4 12.5842514285116 19.808606929622737 38.12496564504857 29.482175996817094 5 11.756853322025647 40.12239524030144 35.43101394876466 12.689737488908259 6 26.437738357924935 41.02308390984214 18.21401367916009 14.325164053072836 7 22.98208830989344 34.86589135721035 23.649555937713494 18.502464395182717 8 24.033284385707294 36.252391758999686 22.44523493551739 17.269088919775626 9 23.65452922592078 15.95666433707377 20.072452956619838 40.316353480385615 10 13.700362003031088 29.640797715428448 34.55728573634767 22.101554545192794 11 30.887260791381028 24.234048178075128 25.23289385170702 19.645797178836826 12 20.06826492444528 27.739954612201306 30.049654356469595 22.142126106883815 13 28.42417436871959 21.841896550370247 27.212786062228922 22.52114301868124 14 21.09590331927725 23.46135624186933 27.7370753400813 27.70566509877212 15 23.334930020599884 29.99416293015671 24.042707458100047 22.628199591143357 16 22.991511382286195 28.94479911841923 24.386649600435558 23.67703989885902 17 20.566902505228494 30.640166893082153 25.894864687297957 22.89806591439139 18 21.92722770592685 27.11174978601773 27.49940451417518 23.46161799388024 19 23.16295894943213 28.5123847963962 28.470504474650625 19.854151779521047 20 22.25520297559686 27.803822102863307 27.40150926209491 22.53946565944493 21 23.20431576715588 27.107038249821354 26.884549040548006 22.80409694247476 22 21.219450268426687 30.835433893220888 26.91805329794446 21.027062540407968 23 21.92722770592685 27.06882245622852 27.510921602655213 23.493028235189417 24 22.67479144908531 28.786700903829693 28.338319709141164 20.200187937943834 25 22.51250520232122 28.163469365853405 26.951557555340923 22.37246787648446 26 21.934295010221415 26.808640957384156 28.639334521687466 22.617729510706965 27 21.772008763457325 30.055936404731433 27.255451640007223 20.916603191804022 28 20.09025209336171 26.866226399784317 28.681738347454854 24.361783159399124 29 22.828963383511194 27.17535552466882 28.695349452022167 21.30033163979782 30 21.328077352954264 28.238330440973613 27.901455602932668 22.532136603139456 31 21.79059315623192 26.49480029630328 28.36266264615578 23.35194390130902 32 23.972296167165304 27.389992173614875 27.758277252964998 20.879434406254827 33 20.475289301410058 26.56102355506346 29.421187778275105 23.542499365251373 34 20.854044461196573 28.844286346229854 28.534895469334444 21.76677372323913 35 22.08663468057093 26.893710360929845 30.448040917074344 20.571614041424873 36 22.29943906544062 27.05704361573758 26.31366790475368 24.329849414068125 37 22.063338751599957 27.19001363727977 28.65556314636387 22.0910844647564 38 22.075641096112722 26.54741245049615 28.412919032250468 22.964027421140663 39 23.378380854410914 27.103635473679528 27.652791192568337 21.86519247934122 40 20.96371855376779 26.336963833724653 31.18304056370913 21.516277048798425 41 21.86833350347214 27.788378734219627 27.319580882680132 23.023706879628104 42 21.95942320326876 26.21760491674977 29.884488837585494 21.938483042395973 43 22.435811863124638 26.053224653898404 29.058922995175912 22.452040487801046 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 7.0 1 8.0 2 9.0 3 40.5 4 72.0 5 72.0 6 106.5 7 141.0 8 145.5 9 150.0 10 231.5 11 313.0 12 313.0 13 507.0 14 701.0 15 1719.5 16 2738.0 17 3047.5 18 3357.0 19 3357.0 20 3552.0 21 3747.0 22 4559.0 23 5371.0 24 6796.5 25 8222.0 26 8222.0 27 10064.0 28 11906.0 29 14367.5 30 16829.0 31 18055.0 32 19281.0 33 19281.0 34 20804.0 35 22327.0 36 23111.5 37 23896.0 38 25481.5 39 27067.0 40 27067.0 41 28187.0 42 29307.0 43 27530.0 44 25753.0 45 26033.5 46 26314.0 47 26314.0 48 25553.0 49 24792.0 50 25001.0 51 25210.0 52 29338.0 53 33466.0 54 33466.0 55 25860.5 56 18255.0 57 19515.0 58 20775.0 59 16950.0 60 13125.0 61 13125.0 62 9984.0 63 6843.0 64 5750.5 65 4658.0 66 3855.0 67 3052.0 68 3052.0 69 2384.0 70 1716.0 71 1467.5 72 1219.0 73 965.5 74 712.0 75 712.0 76 540.5 77 369.0 78 284.5 79 200.0 80 139.5 81 79.0 82 79.0 83 55.5 84 32.0 85 23.0 86 14.0 87 9.0 88 4.0 89 4.0 90 7.0 91 10.0 92 6.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 382041.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.72388962245788 #Duplication Level Percentage of deduplicated Percentage of total 1 87.94295714525207 53.4023842276083 2 6.984396875750938 8.482394899250794 3 1.8105567102148297 3.298321374788573 4 0.8045782308322803 1.9542847872676732 5 0.4649406960864021 1.4116503755069711 6 0.3109806118925887 1.133037141077398 7 0.21991840078542751 0.9348010486669228 8 0.17671438634199454 0.8584627912745325 9 0.13916153380944024 0.7605386656862752 >10 0.9806838985337508 11.748099987625775 >50 0.11553494729525925 4.865200292130689 >100 0.044403356609694876 4.9560383067279705 >500 0.0017244021984347524 0.5908397664422688 >1k 0.0030177038472608167 4.133522335898725 >5k 4.311005496086881E-4 1.4704240000470639 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATG 5617 1.4702610452804803 No Hit TCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTT 3855 1.0090540020573708 Illumina PCR Primer Index 11 (95% over 22bp) CTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGT 3507 0.9179643022607521 No Hit ACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCC 2959 0.7745242002821686 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1460 0.38215793592834274 No Hit CATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTC 1409 0.3688085833719418 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1407 0.3682850793501221 No Hit CTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTTC 1193 0.3122701490154198 Illumina PCR Primer Index 11 (95% over 23bp) CACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCG 678 0.17746786339686055 No Hit GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC 539 0.14108433388039504 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 539 0.14108433388039504 No Hit ACTTTATTCCATTTGTAATTTTTGGCTACACAACACTAAAAGA 501 0.13113775746582174 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 481 0.12590271724762525 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 467 0.12223818909488772 No Hit TTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTA 449 0.11752665289851089 No Hit GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC 445 0.1164796448548716 No Hit ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT 419 0.10967409257121617 No Hit TATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTAT 410 0.10731832447302776 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 2.617520109098238E-4 0.0 13 0.0 0.0 0.0 5.235040218196476E-4 0.0 14 0.0 0.0 0.0 5.235040218196476E-4 0.0 15 0.0 0.0 0.0 5.235040218196476E-4 0.0 16 0.0 0.0 0.0 5.235040218196476E-4 0.0 17 0.0 0.0 0.0 7.852560327294715E-4 0.0 18 0.0 0.0 0.0 7.852560327294715E-4 0.0 19 0.0 0.0 0.0 7.852560327294715E-4 0.0 20 0.0 0.0 0.0 7.852560327294715E-4 0.0 21 0.0 0.0 0.0 0.001308760054549119 0.0 22 0.0 0.0 0.0 0.001308760054549119 0.0 23 0.0 0.0 0.0 0.001570512065458943 0.0 24 0.0 0.0 0.0 0.0020940160872785904 0.0 25 0.0 0.0 0.0 0.0020940160872785904 0.0 26 0.0 0.0 0.0 0.0020940160872785904 0.0 27 0.0 0.0 0.0 0.0020940160872785904 0.0 28 0.0 0.0 0.0 0.005758544240016124 0.0 29 0.0 0.0 0.0 0.014658112610950133 0.0 30 0.0 0.0 0.0 0.026436953101892206 0.0 31 0.0 0.0 0.0 0.054967922291063 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGAAT 20 0.0018403983 37.0 22 GATTACG 35 2.384166E-5 31.714285 1 GCTCACG 30 3.5950207E-4 30.833332 21 CTTATAC 560 0.0 30.062498 1 GGTATCA 185 0.0 30.0 1 CGTCTTC 215 0.0 27.534883 37 CTCACGC 35 8.8585145E-4 26.42857 22 GTATCAA 695 0.0 26.08633 1 TTATACA 655 0.0 25.984732 2 TATACAC 665 0.0 25.872179 3 CCGTCTT 640 0.0 25.148438 37 GTCGCCA 75 1.3676981E-8 24.666666 12 GCCGTCT 665 0.0 24.203007 36 TCGCCAT 85 5.1579264E-8 21.764706 13 ACACTTA 70 5.0872222E-6 21.142857 6 AGCGAAC 45 0.0038212033 20.555555 22 CACTTAC 55 5.134459E-4 20.181818 7 TGCCGTC 800 0.0 20.11875 35 ACAATAC 65 6.886722E-5 19.923077 3 ATACTGG 75 9.239238E-6 19.733334 6 >>END_MODULE