##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631008.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 372930 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.145413348349557 31.0 30.0 31.0 26.0 34.0 2 30.140047730137024 31.0 30.0 33.0 26.0 34.0 3 29.585477167296812 31.0 30.0 33.0 25.0 34.0 4 33.813742525406916 35.0 33.0 37.0 28.0 37.0 5 33.40635239857346 35.0 33.0 37.0 28.0 37.0 6 33.713683533102724 35.0 33.0 37.0 29.0 37.0 7 33.81142841820181 35.0 33.0 37.0 29.0 37.0 8 33.88403990024938 35.0 33.0 37.0 29.0 37.0 9 35.470270560158745 37.0 34.0 39.0 30.0 39.0 10 35.0967634676749 37.0 34.0 39.0 29.0 39.0 11 35.28963880621028 37.0 34.0 39.0 30.0 39.0 12 35.16412999758668 37.0 34.0 39.0 30.0 39.0 13 35.358198589547634 37.0 34.0 39.0 30.0 39.0 14 36.105561365403695 38.0 34.0 40.0 30.0 41.0 15 36.123218834633846 38.0 34.0 40.0 30.0 41.0 16 36.115742900812485 38.0 34.0 40.0 30.0 41.0 17 36.01665996299574 38.0 34.0 40.0 29.0 41.0 18 36.11278524119808 38.0 34.0 40.0 30.0 41.0 19 36.09573914675676 38.0 34.0 40.0 29.0 41.0 20 36.12548467540825 38.0 34.0 40.0 30.0 41.0 21 36.00738744536508 38.0 34.0 40.0 29.0 41.0 22 35.75178988013836 38.0 34.0 40.0 29.0 41.0 23 35.821449065508276 38.0 34.0 40.0 29.0 41.0 24 35.63388303434961 38.0 34.0 40.0 28.0 41.0 25 35.55079237390395 38.0 34.0 40.0 27.0 41.0 26 35.36215107392808 38.0 34.0 40.0 27.0 41.0 27 35.19552194781863 38.0 33.0 40.0 27.0 40.0 28 35.171431635963856 37.0 33.0 40.0 27.0 40.0 29 35.002169307913015 37.0 33.0 39.0 27.0 40.0 30 34.883506288043336 37.0 33.0 39.0 27.0 40.0 31 34.88737296543587 37.0 33.0 39.0 27.0 40.0 32 34.533386962700774 37.0 33.0 39.0 25.0 40.0 33 34.4737511061057 37.0 33.0 39.0 25.0 40.0 34 34.45642077601695 37.0 33.0 39.0 25.0 40.0 35 34.35365081918859 37.0 32.0 39.0 25.0 40.0 36 34.506231732496715 37.0 33.0 39.0 25.0 40.0 37 34.51255999785482 37.0 33.0 39.0 25.0 40.0 38 34.39078647467353 37.0 32.0 39.0 25.0 40.0 39 34.23434692837798 37.0 32.0 39.0 25.0 40.0 40 33.94363285335049 37.0 32.0 39.0 24.0 40.0 41 33.98797361435122 37.0 32.0 39.0 24.0 40.0 42 33.9472340653742 37.0 32.0 39.0 24.0 40.0 43 32.99300136754887 36.0 30.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 16.0 11 19.0 12 16.0 13 12.0 14 16.0 15 22.0 16 26.0 17 37.0 18 62.0 19 115.0 20 203.0 21 427.0 22 763.0 23 1253.0 24 1980.0 25 3104.0 26 4533.0 27 6579.0 28 9173.0 29 11951.0 30 15652.0 31 19956.0 32 25384.0 33 31364.0 34 39289.0 35 46639.0 36 51667.0 37 50304.0 38 38727.0 39 13631.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.20515914514788 26.504705976993005 17.20832327782694 23.08181160003218 2 13.95838361086531 23.09495079505537 39.55782586544392 23.3888397286354 3 15.749872630252327 30.485345775346577 34.513179417048775 19.251602177352318 4 11.92609873166546 19.73533907167565 33.71973292575014 34.618829270908755 5 11.867106427479687 40.37781889362615 33.44488241761188 14.310192261282278 6 26.532593248062643 38.54503526130909 17.805754431126488 17.11661705950178 7 21.816962968921782 36.34649934304025 21.30319362883115 20.533344059206822 8 24.811358700024133 33.55267744616952 24.200520204864183 17.43544364894216 9 21.569999731853162 15.147614833883033 18.165875633496903 45.1165098007669 10 13.685678277424717 27.81084922103344 33.53337087389055 24.9701016276513 11 29.42804279623522 22.577695546081035 23.77872522993591 24.215536427747836 12 18.18008741586893 28.667042072238758 27.026519722199875 26.126350789692438 13 30.55881800874159 19.660526104094604 25.24334325476631 24.5373126323975 14 21.58153004585311 25.310111817231117 24.440511624165392 28.667846512750383 15 25.174697664441048 29.70289330437347 21.041750462553292 24.08065856863218 16 25.101761724720458 27.551551229453246 21.528168825248706 25.81851822057759 17 19.310862628375297 33.21373984393854 22.830826160405437 24.644571367280722 18 23.054460622636956 24.71965248169898 23.947657737376986 28.278229158287076 19 26.064408870297374 29.029576596144047 23.96347840077226 20.942536132786312 20 21.834660660177512 25.643954629555143 24.26621617998016 28.255168530287182 21 29.382994127584265 24.903333065186494 24.545357037513742 21.168315769715495 22 19.028772155632424 33.581369157750785 26.997828010618612 20.39203067599818 23 25.53642774783472 27.766873139731317 23.95731102351648 22.739388088917494 24 27.00533612206044 28.74105059930818 25.60882739388089 18.64478588475049 25 20.361730083393667 28.16882524870619 27.304051698710214 24.165392969189927 26 28.050036199823026 28.85662188614485 24.178264017375913 18.91507789665621 27 19.288338294049822 29.411685839165525 28.2490011530314 23.05097471375325 28 22.902689512777197 27.420963719732928 27.733891078754723 21.94245568873515 29 23.225002011101278 25.249778778859305 29.426702062049177 22.09851714799024 30 18.805673987075323 29.043520231678865 30.506261228648807 21.644544552597004 31 26.566379749550855 26.36553776848202 24.53463116402542 22.533451317941704 32 21.997425790362804 26.492103075644224 32.60451022980184 18.905960904191137 33 19.170085538841068 30.800686455903254 30.092778805673987 19.93644919958169 34 21.36084519883088 31.205856326924625 26.2151073928083 21.218191081436196 35 20.404633577346956 24.730914648861717 35.9753841203443 18.88906765344703 36 22.667524736545733 27.350709248384415 24.01335371249296 25.968412302576894 37 21.818839996782238 25.394309924114445 29.282707210468452 23.504142868634865 38 21.76199286729413 23.982248679376827 28.06558871638109 26.190169736947954 39 26.51275038210924 25.359718982114604 26.338991231598424 21.78853940417773 40 19.898640495535354 23.29096613305446 34.96849274662806 21.84190062478213 41 22.365323251012253 27.220658032338505 25.74826374922908 24.66575496742016 42 21.180650524227065 23.50494730914649 33.404928538867885 21.90947362775856 43 23.20194138310139 23.526935349797547 29.78065588716381 23.490467379937254 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 6.0 2 9.0 3 32.5 4 56.0 5 56.0 6 84.5 7 113.0 8 114.0 9 115.0 10 191.0 11 267.0 12 267.0 13 374.0 14 481.0 15 1299.5 16 2118.0 17 2325.0 18 2532.0 19 2532.0 20 2717.0 21 2902.0 22 3584.5 23 4267.0 24 5393.5 25 6520.0 26 6520.0 27 7963.0 28 9406.0 29 11680.0 30 13954.0 31 15055.0 32 16156.0 33 16156.0 34 17454.0 35 18752.0 36 19579.5 37 20407.0 38 22159.0 39 23911.0 40 23911.0 41 24899.5 42 25888.0 43 24352.5 44 22817.0 45 22868.0 46 22919.0 47 22919.0 48 24095.5 49 25272.0 50 34343.5 51 43415.0 52 34003.0 53 24591.0 54 24591.0 55 30948.5 56 37306.0 57 30440.0 58 23574.0 59 16196.5 60 8819.0 61 8819.0 62 7435.5 63 6052.0 64 5108.0 65 4164.0 66 3312.5 67 2461.0 68 2461.0 69 1988.5 70 1516.0 71 1233.0 72 950.0 73 761.0 74 572.0 75 572.0 76 429.0 77 286.0 78 240.0 79 194.0 80 138.5 81 83.0 82 83.0 83 64.5 84 46.0 85 33.0 86 20.0 87 15.0 88 10.0 89 10.0 90 8.0 91 6.0 92 3.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 372930.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.795422455329714 #Duplication Level Percentage of deduplicated Percentage of total 1 87.66288528127093 48.91187717921617 2 7.392315684873256 8.249147531213266 3 1.8326700753262841 3.0676380322221286 4 0.7843958460074175 1.7506279040075845 5 0.4527142661900978 1.2629691866815551 6 0.3009784035479572 1.0075930305533387 7 0.2092619924873054 0.8173102892271267 8 0.1562127711655842 0.6972766048081215 9 0.1439422880933192 0.722818869601817 >10 0.8926535782948886 9.733172301649514 >50 0.11288521227542322 4.3395174061477 >100 0.05283988659700545 5.300906383718597 >500 0.0014410878162819667 0.665762537018758 >1k 0.0028821756325639334 3.425031988954391 >5k 9.607252108546445E-4 3.463626918636638 >10k+ 9.607252108546445E-4 6.584723836343335 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATG 13288 3.563135172820637 No Hit TCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTT 11280 3.024696323706862 TruSeq Adapter, Index 12 (95% over 22bp) ACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCC 7351 1.9711474003164131 No Hit CTTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGT 5572 1.494114176923283 No Hit CTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCTTC 4371 1.172069825436409 RNA PCR Primer, Index 12 (95% over 23bp) CATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTC 3528 0.9460220416700185 No Hit CACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCG 1774 0.4756924892070898 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1068 0.2863808221382029 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1021 0.27377792078942426 No Hit TATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTAT 1017 0.27270533344059206 No Hit TTATACACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTA 988 0.2649290751615585 No Hit ACATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGT 977 0.2619794599522699 No Hit GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC 519 0.1391682085109806 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 476 0.12763789451103424 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 454 0.12173866409245704 No Hit ATCTCCGAGCCCACGAGACGCGTAGTAATCTCGTATGCCGTCT 424 0.11369425897621538 TruSeq Adapter, Index 12 (95% over 21bp) GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG 401 0.10752688172043011 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 387 0.10377282599951733 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 2.6814683720805514E-4 0.0 11 0.0 0.0 0.0 2.6814683720805514E-4 0.0 12 0.0 0.0 0.0 2.6814683720805514E-4 0.0 13 0.0 0.0 0.0 2.6814683720805514E-4 0.0 14 0.0 0.0 0.0 2.6814683720805514E-4 0.0 15 0.0 0.0 0.0 2.6814683720805514E-4 0.0 16 0.0 0.0 0.0 2.6814683720805514E-4 0.0 17 0.0 0.0 0.0 2.6814683720805514E-4 0.0 18 0.0 0.0 0.0 5.362936744161103E-4 0.0 19 0.0 0.0 0.0 5.362936744161103E-4 0.0 20 0.0 0.0 0.0 5.362936744161103E-4 0.0 21 0.0 0.0 0.0 8.044405116241654E-4 0.0 22 0.0 0.0 0.0 0.0013407341860402757 0.0 23 0.0 0.0 0.0 0.0016088810232483307 0.0 24 0.0 0.0 0.0 0.0016088810232483307 0.0 25 0.0 0.0 0.0 0.001877027860456386 0.0 26 0.0 0.0 0.0 0.002145174697664441 0.0 27 0.0 0.0 0.0 0.0026814683720805515 0.0 28 0.0 0.0 0.0 0.004290349395328882 0.0 29 0.0 0.0 0.0 0.006971817767409434 0.0 30 0.0 0.0 0.0 0.013407341860402756 0.0 31 0.0 0.0 0.0 0.036736116697503554 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 735 0.0 33.22449 1 CGTCTTC 665 0.0 31.714287 37 CGGAGAT 30 3.594857E-4 30.833334 1 TAATACG 25 0.005491641 29.6 2 TGAACGC 25 0.005491641 29.6 4 TTATACA 895 0.0 27.491621 2 TATACAC 990 0.0 25.601007 3 GTATCAA 465 0.0 25.462364 1 CCGTCTT 1855 0.0 23.73585 37 GCCGTCT 1905 0.0 23.11286 36 GGTATCA 170 0.0 22.852943 1 TACACAT 2600 0.0 21.275 2 ATACACA 2605 0.0 21.021112 1 CTATGCA 45 0.003821035 20.555555 9 TAAGAGT 45 0.003821035 20.555555 4 CTTATAA 55 5.1341444E-4 20.181818 1 TGCCGTC 2265 0.0 19.684326 35 ATGCCGT 2325 0.0 19.255915 34 GATACAC 80 1.6119024E-5 18.5 3 CGTATAC 50 0.0070261885 18.5 1 >>END_MODULE