##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631005.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 583688 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97543036690835 31.0 30.0 34.0 28.0 34.0 2 30.988766258686148 31.0 31.0 34.0 27.0 34.0 3 30.405466619152698 31.0 30.0 34.0 26.0 34.0 4 34.623362138676825 35.0 35.0 37.0 32.0 37.0 5 34.741123682515315 35.0 35.0 37.0 32.0 37.0 6 34.95299886240594 35.0 35.0 37.0 32.0 37.0 7 34.97564280917202 36.0 35.0 37.0 32.0 37.0 8 35.01583722810817 36.0 35.0 37.0 32.0 37.0 9 36.7198212058497 38.0 35.0 39.0 32.0 39.0 10 36.498178821562206 38.0 35.0 39.0 32.0 39.0 11 36.572273200751084 38.0 35.0 39.0 32.0 39.0 12 36.48202464330259 38.0 35.0 39.0 32.0 39.0 13 36.59260598127767 38.0 35.0 39.0 32.0 39.0 14 37.55054069982594 39.0 36.0 40.0 32.0 41.0 15 37.55761982428969 39.0 36.0 40.0 32.0 41.0 16 37.546242170474635 39.0 36.0 40.0 32.0 41.0 17 37.51984279272488 39.0 36.0 40.0 32.0 41.0 18 37.57245823110977 39.0 37.0 40.0 32.0 41.0 19 37.58770267677252 39.0 37.0 40.0 32.0 41.0 20 37.57422629898165 39.0 37.0 40.0 32.0 41.0 21 37.509996779101165 39.0 37.0 40.0 32.0 41.0 22 37.4121345650416 39.0 36.0 40.0 32.0 41.0 23 37.45082818217952 39.0 36.0 40.0 32.0 41.0 24 37.36610826331876 39.0 36.0 40.0 32.0 41.0 25 37.32702231329066 39.0 36.0 40.0 32.0 41.0 26 37.17124902345088 39.0 36.0 40.0 31.0 41.0 27 37.04219034826825 39.0 36.0 40.0 31.0 41.0 28 37.052988925590384 39.0 36.0 40.0 31.0 41.0 29 36.97732178835268 39.0 36.0 40.0 31.0 41.0 30 36.89220097038144 39.0 36.0 40.0 31.0 41.0 31 36.86311865243075 39.0 36.0 40.0 31.0 41.0 32 36.74874076561451 39.0 35.0 40.0 30.0 41.0 33 36.70934985814339 39.0 35.0 40.0 30.0 41.0 34 36.64661600032894 38.0 35.0 40.0 30.0 41.0 35 36.643191225449215 38.0 35.0 40.0 30.0 41.0 36 36.64100341278217 38.0 35.0 40.0 30.0 41.0 37 36.57494757473171 38.0 35.0 40.0 30.0 41.0 38 36.47815613821083 38.0 35.0 40.0 30.0 41.0 39 36.41770260824276 38.0 35.0 40.0 30.0 41.0 40 36.26569331560697 38.0 35.0 40.0 30.0 41.0 41 36.265607653403876 38.0 35.0 40.0 30.0 41.0 42 36.21430284672633 38.0 35.0 40.0 30.0 41.0 43 35.42213819711901 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 18.0 11 16.0 12 17.0 13 14.0 14 7.0 15 22.0 16 19.0 17 16.0 18 31.0 19 54.0 20 92.0 21 187.0 22 373.0 23 720.0 24 1256.0 25 2016.0 26 3262.0 27 4830.0 28 7099.0 29 10086.0 30 13486.0 31 17313.0 32 22324.0 33 29125.0 34 37780.0 35 51087.0 36 69814.0 37 99967.0 38 141539.0 39 71109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.74495278299366 24.258850618823754 16.402769972999273 23.593426625183316 2 13.635538164224723 22.85656035416181 40.98987815408231 22.518023327531147 3 15.013157714395362 29.398240155699618 35.25736352297803 20.331238606926988 4 11.554117953427173 19.92845492797522 36.519167774564494 31.998259344033116 5 11.762277106947547 39.65697427392716 35.13383862611532 13.446909993009964 6 26.711873466646562 40.14370691191184 17.88712462822604 15.257294993215552 7 22.592549444223625 35.000034264881236 22.456003892490507 19.951412398404628 8 24.306307479338276 35.4490755335042 23.008182453639616 17.236434533517908 9 22.544407286084347 15.08442866737024 19.29472594947986 43.076438097065555 10 13.471580707501268 29.089170926933566 33.916750044544344 23.52249832102082 11 29.830320308109815 23.182419374734447 25.39712997354751 21.59013034360823 12 18.870698044160577 27.80749304422911 28.914934005838738 24.406874905771577 13 29.071353188689848 20.64990200243966 26.85338742615918 23.42535738271131 14 21.158735488822796 23.85572429105961 26.35055029399268 28.634989926124916 15 23.892387713984185 29.679897479475336 22.838571291511904 23.589143515028578 16 24.623086306382863 27.97042255451543 23.112690341415277 24.293800797686433 17 19.92794095475665 32.12041364564631 24.517036498951494 23.43460890064555 18 22.34087389153109 25.62105097243733 25.75554063129617 26.282534504735406 19 23.397088855690026 27.813146749633365 25.90065240333877 22.88911199133784 20 23.46167815682351 25.849083757075697 26.724380148298405 23.964857937802385 21 23.27202203917161 26.722666904236508 27.20357451241074 22.801736544181136 22 19.762098929565113 33.78311700771645 25.431737503597812 21.023046559120626 23 21.94802702813832 25.546010882526282 27.090500404325596 25.4154616850098 24 22.662449801948988 29.29835802689108 27.386548978221242 20.652643192938694 25 22.53498444374392 29.64272008333219 25.779183399350337 22.043112073573553 26 24.14235002261482 26.28373377557873 27.081420210797553 22.492495991008894 27 21.933978426830773 31.13444168802511 26.48349803319582 20.448081851948302 28 19.546058853360016 25.77747015528844 30.61824125217582 24.058229739175722 29 20.43540384589027 28.620598676004988 27.23835336686723 23.70564411123751 30 21.710228752347145 27.399055659873085 28.0812694453201 22.80944614245967 31 22.42516549937638 25.408266059949835 30.161490385274327 22.00507805539946 32 21.171584819287016 31.206569263030936 27.416188100492043 20.205657817190005 33 21.77807321719823 25.842230780828114 29.865955784597247 22.51374021737641 34 19.94096160962706 29.729410232864133 28.73795589424487 21.591672263263938 35 20.595420841271363 28.01016981675141 31.65475390962295 19.739655432354272 36 24.583167719740683 26.310117734131932 25.06664519400776 24.040069352119627 37 21.880696536505802 26.908725209358426 28.211647318430394 22.998930935705378 38 21.44861638409561 25.500438590479845 28.793807650662686 24.257137374761857 39 24.436514028042378 25.86981401022464 27.067885582708573 22.625786379024408 40 20.176361343731582 24.94174970189553 33.30854840257123 21.57334055180165 41 21.80462850015762 27.121681446252104 26.711188169021803 24.36250188456847 42 22.017242088238923 24.83895505818177 31.349796466605444 21.794006386973862 43 22.230712298351175 24.879730266854896 30.133735831471608 22.755821603322325 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9.0 1 13.0 2 17.0 3 61.0 4 105.0 5 105.0 6 164.0 7 223.0 8 223.5 9 224.0 10 337.0 11 450.0 12 450.0 13 697.5 14 945.0 15 2334.0 16 3723.0 17 4185.5 18 4648.0 19 4648.0 20 4925.0 21 5202.0 22 6476.5 23 7751.0 24 9582.5 25 11414.0 26 11414.0 27 13915.0 28 16416.0 29 20562.5 30 24709.0 31 25910.0 32 27111.0 33 27111.0 34 29471.0 35 31831.0 36 32994.0 37 34157.0 38 36211.5 39 38266.0 40 38266.0 41 40116.0 42 41966.0 43 39174.5 44 36383.0 45 37227.5 46 38072.0 47 38072.0 48 39183.5 49 40295.0 50 51339.5 51 62384.0 52 50173.0 53 37962.0 54 37962.0 55 43052.5 56 48143.0 57 39183.5 58 30224.0 59 22234.0 60 14244.0 61 14244.0 62 12187.5 63 10131.0 64 8359.5 65 6588.0 66 5374.5 67 4161.0 68 4161.0 69 3325.5 70 2490.0 71 2047.0 72 1604.0 73 1259.5 74 915.0 75 915.0 76 678.5 77 442.0 78 356.0 79 270.0 80 192.0 81 114.0 82 114.0 83 87.0 84 60.0 85 41.0 86 22.0 87 17.5 88 13.0 89 13.0 90 8.5 91 4.0 92 2.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 583688.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.85346323195955 #Duplication Level Percentage of deduplicated Percentage of total 1 84.93234348177526 44.88968493418169 2 9.222324244954843 9.748635507878598 3 2.2234230228209726 3.5254682095728187 4 0.9345726235295001 1.9758159918124962 5 0.5413088897257491 1.430502475012636 6 0.3442055113551111 1.091547200318712 7 0.2377368508683877 0.8795651134377926 8 0.18861555181326964 0.7975188106190726 9 0.1384675163259112 0.6586639004657076 >10 1.0194707603418987 10.710307521455485 >50 0.12551147571527793 4.626759229926225 >100 0.08324077073534951 7.762822711264178 >500 0.0052025481709593435 1.8528003464719747 >1k 0.0022761148247947127 2.601069774960888 >5k 3.2515926068495897E-4 1.220019447138906 >10k+ 9.754777820548769E-4 6.228818825482817 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATG 12877 2.206144378503584 No Hit TCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCTT 12071 2.06805690711476 TruSeq Adapter, Index 11 (95% over 21bp) CTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGT 11296 1.9352804923178135 No Hit ACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCC 7099 1.2162319595400282 No Hit CTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCTTC 4413 0.7560546045147407 RNA PCR Primer, Index 11 (95% over 22bp) CATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTC 3218 0.5513219391181591 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1870 0.3203766395745672 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1831 0.3136949877331725 No Hit CACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCG 1591 0.27257713024766655 No Hit TTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTA 1188 0.20353339455325448 No Hit TATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTAT 1024 0.17543619193815874 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 966 0.16549937637916146 No Hit GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC 915 0.15676183166349145 No Hit ACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGT 782 0.13397568564027357 No Hit GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC 727 0.12455284329984512 No Hit ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT 707 0.12112635517605295 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 697 0.11941311111415688 No Hit ACTTTATTCCATTTGTAATTTTTGGCTACACAACACTAAAAGA 692 0.11855648908320883 No Hit GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC 680 0.11650059620893355 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 666 0.11410205452227903 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 645 0.11050424199229726 No Hit GTTATTTCCTGTCAGTGATTTTGGTCTGAATCAACCAGTTTAT 619 0.10604980743136744 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 3.426488123792163E-4 0.0 16 0.0 0.0 0.0 5.139732185688244E-4 0.0 17 0.0 0.0 0.0 6.852976247584326E-4 0.0 18 0.0 0.0 0.0 6.852976247584326E-4 0.0 19 0.0 0.0 0.0 6.852976247584326E-4 0.0 20 0.0 0.0 0.0 8.566220309480407E-4 0.0 21 0.0 0.0 0.0 0.001199270843327257 0.0 22 0.0 0.0 0.0 0.001199270843327257 0.0 23 0.0 0.0 0.0 0.0018845684680856897 0.0 24 0.0 0.0 0.0 0.0022272172804649057 0.0 25 0.0 0.0 0.0 0.002398541686654514 0.0 26 0.0 0.0 0.0 0.0030838393114129468 0.0 27 0.0 0.0 0.0 0.0035978125299817713 0.0 28 0.0 0.0 0.0 0.00925151793423884 0.0 29 0.0 0.0 0.0 0.020558928742752978 0.0 30 0.0 0.0 0.0 0.032037663957456726 0.0 31 0.0 0.0 0.0 0.06750181603870561 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1445 0.0 33.54325 1 CGTCTTC 585 0.0 31.94017 37 TTATACA 1615 0.0 30.470589 2 TATACAC 1735 0.0 28.789623 3 TTACGGG 45 4.003812E-6 28.777779 3 GATTACG 45 4.003812E-6 28.777779 1 CGGGATA 40 5.9351976E-5 27.75 17 GGTATCA 385 0.0 27.38961 1 CCGTCTT 1800 0.0 24.975 37 GCCGTCT 1865 0.0 24.302948 36 GTATCAA 1040 0.0 23.302885 1 CCGAGGT 55 5.138927E-4 20.181818 32 TGCCGTC 2275 0.0 20.085714 35 CTTACAC 75 9.252966E-6 19.733332 3 ATTGGTC 85 1.2431592E-6 19.588236 16 ATACAGT 125 4.110916E-10 19.24 6 ATGCCGT 2370 0.0 19.202532 34 GTCCTAG 60 9.2293904E-4 18.5 1 CGGGGTG 90 2.1485248E-6 18.5 16 ACAGCGT 50 0.007030835 18.5 8 >>END_MODULE