##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631001.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 542483 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.273033440679246 31.0 31.0 34.0 28.0 34.0 2 31.33421876814573 31.0 31.0 34.0 28.0 34.0 3 30.794332725633797 31.0 31.0 34.0 26.0 34.0 4 34.91662595878581 37.0 35.0 37.0 32.0 37.0 5 35.1073452992997 37.0 35.0 37.0 32.0 37.0 6 35.29363869466877 37.0 35.0 37.0 32.0 37.0 7 35.28512598551475 37.0 35.0 37.0 32.0 37.0 8 35.33406392458381 37.0 35.0 37.0 32.0 37.0 9 37.11092329160545 39.0 37.0 39.0 33.0 39.0 10 36.92283260489269 39.0 37.0 39.0 33.0 39.0 11 36.98017818069875 39.0 37.0 39.0 33.0 39.0 12 36.8803243603947 39.0 37.0 39.0 33.0 39.0 13 36.99992995172199 39.0 37.0 39.0 33.0 39.0 14 38.02582569407705 40.0 37.0 41.0 33.0 41.0 15 38.035798356814865 40.0 37.0 41.0 33.0 41.0 16 38.036246297118986 40.0 37.0 41.0 33.0 41.0 17 37.95510827067392 40.0 37.0 41.0 33.0 41.0 18 38.05133617090305 40.0 37.0 41.0 33.0 41.0 19 38.05550404344468 40.0 37.0 41.0 33.0 41.0 20 38.07955456668688 40.0 37.0 41.0 33.0 41.0 21 38.052215461129656 40.0 37.0 41.0 33.0 41.0 22 37.945644379639546 40.0 37.0 41.0 33.0 41.0 23 37.940905060619414 40.0 37.0 41.0 33.0 41.0 24 37.88837069548723 40.0 37.0 41.0 33.0 41.0 25 37.82094001102339 40.0 37.0 41.0 32.0 41.0 26 37.67349391593838 39.0 37.0 41.0 32.0 41.0 27 37.600451995730744 39.0 37.0 41.0 32.0 41.0 28 37.61595662905566 39.0 37.0 41.0 32.0 41.0 29 37.57915178908832 39.0 37.0 41.0 32.0 41.0 30 37.495080951845495 39.0 37.0 41.0 32.0 41.0 31 37.46320345522348 39.0 37.0 41.0 32.0 41.0 32 37.3380511463032 39.0 36.0 41.0 31.0 41.0 33 37.13573144227561 39.0 36.0 40.0 31.0 41.0 34 37.14917333815069 39.0 36.0 40.0 31.0 41.0 35 37.17080535242579 39.0 36.0 40.0 31.0 41.0 36 37.13687986535984 39.0 36.0 40.0 31.0 41.0 37 37.10021327857279 39.0 36.0 40.0 31.0 41.0 38 37.05765157617842 39.0 36.0 40.0 31.0 41.0 39 36.90731691131335 39.0 36.0 40.0 30.0 41.0 40 36.701127961613544 39.0 35.0 40.0 30.0 41.0 41 36.71788056031249 39.0 35.0 40.0 30.0 41.0 42 36.701113214607645 39.0 35.0 40.0 30.0 41.0 43 35.855862764363124 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 7.0 10 19.0 11 15.0 12 16.0 13 17.0 14 9.0 15 7.0 16 12.0 17 14.0 18 24.0 19 43.0 20 80.0 21 156.0 22 279.0 23 578.0 24 981.0 25 1601.0 26 2600.0 27 3896.0 28 5667.0 29 8006.0 30 10638.0 31 13861.0 32 17796.0 33 22604.0 34 29666.0 35 39199.0 36 53302.0 37 77925.0 38 130974.0 39 122484.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.8576195014406 23.906186921986496 16.589275608636584 26.646917967936325 2 12.17734011941388 20.65815887318128 42.771294215671276 24.393206791733565 3 13.242626957895453 28.829290503112542 36.588611993371224 21.339470545620784 4 10.413598214137586 20.244136682624156 34.33213575356279 35.01012934967547 5 12.00111339894522 37.79381105030019 35.55429386727326 14.650781683481325 6 27.059834133051176 39.48621431454995 17.121273846369377 16.332677706029497 7 22.252125873068834 34.77952304496178 21.07844854124461 21.88990254072478 8 25.040047337888925 34.37158399433715 23.270406630253852 17.317962037520072 9 21.321221125823296 14.290217389300677 18.113378668087297 46.27518281678873 10 13.689645574147026 28.33084170379533 32.819830298829636 25.15968242322801 11 28.681820444142954 21.86501696827366 25.64485891723796 23.808303670345428 12 18.043883402797874 27.19016079766555 26.811531421261126 27.95442437827545 13 29.69475541169032 18.771832481386515 26.49189006844454 25.041522038478625 14 21.705011954291656 23.874296521734323 23.78489279848401 30.635798725490016 15 24.494039444554023 28.910583373119525 20.46239236989915 26.132984812427303 16 27.60842275241805 26.077683540313707 21.40380435884627 24.91008934842198 17 18.610352766814813 34.30725018111166 22.92698573042842 24.1554113216451 18 25.453885190872338 23.351699500260835 23.39612485552543 27.798290453341394 19 24.989538842691843 27.554411843320437 23.3203621127298 24.13568720125792 20 19.616835919282263 24.659390248173676 24.76814941666375 30.95562441588031 21 25.167424601323912 23.671340853077425 26.581109454121144 24.58012509147752 22 19.046495466217376 33.69045665947136 23.34045490826441 23.922592966046864 23 22.91352908754744 26.783327772483194 25.620342019934267 24.682801120035098 24 26.199715014111042 26.964162932294656 26.840841095481334 19.995280958112975 25 22.729007176261746 30.00130879677336 23.74526022013593 23.52442380682897 26 26.21280298184459 28.879245985588486 26.261283763730848 18.646667268836072 27 19.923942317086436 31.041525725230102 24.730728889200215 24.30380306848325 28 19.142904017268744 25.641725178484855 31.164294549322285 24.051076254924116 29 23.186164359067472 23.826368752569206 27.10389081316834 25.88357607519498 30 20.511241826932824 26.756598824294954 28.265401865127572 24.46675748364465 31 20.54884669197007 24.993778606887222 31.242269343002455 23.215105358140256 32 25.321162137799707 24.91230139930652 26.53871181216739 23.227824650726383 33 18.795059015674223 32.174648790837686 29.436314133346116 19.593978060141975 34 20.248007771672107 30.014028089359485 29.36810923107268 20.369854907895732 35 24.562797359548593 23.54875636655895 33.36546951701712 18.52297675687533 36 23.192616174147393 28.488450329319075 23.11150764171412 25.207425854819416 37 20.664795025834913 27.01762082867113 28.339874244907215 23.977709900586746 38 21.3966151934715 23.09196785890065 29.477237074710178 26.03417987291768 39 25.715828883117076 24.365003142955633 25.83509529330873 24.08407268061856 40 19.413695913051654 22.402360995644102 36.48556728966622 21.698375801638022 41 21.69505772531121 25.67177220299991 25.448355063660983 27.1848150080279 42 22.513332215018718 23.026712357806602 33.19790666251293 21.26204876466175 43 22.44125622369733 22.451763465398916 31.98902085410971 23.117959456794036 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 11.0 1 11.0 2 11.0 3 51.5 4 92.0 5 92.0 6 137.0 7 182.0 8 186.5 9 191.0 10 262.0 11 333.0 12 333.0 13 549.0 14 765.0 15 1607.0 16 2449.0 17 2800.0 18 3151.0 19 3151.0 20 3496.5 21 3842.0 22 4885.0 23 5928.0 24 7609.0 25 9290.0 26 9290.0 27 11641.5 28 13993.0 29 15974.0 30 17955.0 31 19980.5 32 22006.0 33 22006.0 34 24378.5 35 26751.0 36 28188.5 37 29626.0 38 31224.5 39 32823.0 40 32823.0 41 33391.5 42 33960.0 43 33785.0 44 33610.0 45 33648.5 46 33687.0 47 33687.0 48 34785.0 49 35883.0 50 53010.5 51 70138.0 52 49665.0 53 29192.0 54 29192.0 55 41924.0 56 54656.0 57 45182.5 58 35709.0 59 25225.0 60 14741.0 61 14741.0 62 12897.0 63 11053.0 64 8891.0 65 6729.0 66 5558.0 67 4387.0 68 4387.0 69 3626.5 70 2866.0 71 2420.0 72 1974.0 73 2085.0 74 2196.0 75 2196.0 76 1824.5 77 1453.0 78 1028.5 79 604.0 80 382.0 81 160.0 82 160.0 83 105.5 84 51.0 85 35.5 86 20.0 87 16.0 88 12.0 89 12.0 90 7.5 91 3.0 92 1.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 542483.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.368018118271536 #Duplication Level Percentage of deduplicated Percentage of total 1 76.30575104047004 36.90757948853772 2 13.842778174708158 13.390954911229958 3 4.3193945738612225 6.267616650254501 4 1.8078677806767685 3.497719262848532 5 0.985556385488732 2.38347045549486 6 0.5655310704755718 1.6412170237924775 7 0.3831848986600216 1.2973725884725174 8 0.2715480005816537 1.0507390889691068 9 0.19281167327357002 0.8393326655679257 >10 1.202554730286293 11.06540598854813 >50 0.08912405926659175 2.9889737381849986 >100 0.028184531534881718 2.0757939017613585 >500 0.0011426161433060157 0.3128060033005668 >1k 0.0022852322866120313 1.7055111770062703 >5k 0.0011426161433060157 4.063162078208069 >10k+ 0.0011426161433060157 10.512344977823052 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGT 20944 3.860766143823862 No Hit TCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCTT 18254 3.364898070538616 TruSeq Adapter, Index 8 (95% over 22bp) ATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATG 17866 3.293375091938365 No Hit ACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCC 9087 1.6750755323208286 No Hit CTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCTTC 7760 1.4304595720050213 RNA PCR Primer, Index 8 (95% over 23bp) CATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTC 5209 0.9602144214657419 No Hit CACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCG 2005 0.3695968352925345 No Hit TTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTA 1895 0.34931970218421593 No Hit TATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTAT 1541 0.2840642010901724 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1337 0.24645933605292702 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1316 0.24258824700497528 No Hit ACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGT 1164 0.2145689358007532 No Hit TCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCTTCT 589 0.10857483091636051 TruSeq Adapter, Index 8 (95% over 24bp) ATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCT 585 0.10783748062151256 TruSeq Adapter, Index 8 (95% over 21bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.8433757371198728E-4 0.0 0.0 0.0 0.0 7 1.8433757371198728E-4 0.0 0.0 0.0 0.0 8 1.8433757371198728E-4 0.0 0.0 1.8433757371198728E-4 0.0 9 1.8433757371198728E-4 0.0 0.0 1.8433757371198728E-4 0.0 10 1.8433757371198728E-4 0.0 0.0 3.6867514742397456E-4 0.0 11 1.8433757371198728E-4 0.0 0.0 3.6867514742397456E-4 0.0 12 1.8433757371198728E-4 0.0 0.0 3.6867514742397456E-4 0.0 13 1.8433757371198728E-4 0.0 0.0 3.6867514742397456E-4 0.0 14 1.8433757371198728E-4 0.0 0.0 3.6867514742397456E-4 0.0 15 1.8433757371198728E-4 0.0 0.0 3.6867514742397456E-4 0.0 16 1.8433757371198728E-4 0.0 0.0 5.530127211359619E-4 0.0 17 1.8433757371198728E-4 0.0 0.0 9.216878685599365E-4 0.0 18 1.8433757371198728E-4 0.0 0.0 9.216878685599365E-4 0.0 19 1.8433757371198728E-4 0.0 0.0 9.216878685599365E-4 0.0 20 1.8433757371198728E-4 0.0 0.0 0.0011060254422719238 0.0 21 1.8433757371198728E-4 0.0 0.0 0.0022120508845438476 0.0 22 1.8433757371198728E-4 0.0 0.0 0.002580726031967822 0.0 23 1.8433757371198728E-4 0.0 0.0 0.0029494011793917965 0.0 24 1.8433757371198728E-4 0.0 0.0 0.0029494011793917965 0.0 25 1.8433757371198728E-4 0.0 0.0 0.0029494011793917965 0.0 26 1.8433757371198728E-4 0.0 0.0 0.0035024139005277585 0.0 27 1.8433757371198728E-4 0.0 0.0 0.00479277691651167 0.0 28 3.6867514742397456E-4 0.0 0.0 0.009954228980447314 0.0 29 3.6867514742397456E-4 0.0 0.0 0.01972412038718264 0.0 30 3.6867514742397456E-4 0.0 0.0 0.03410245113671765 0.0 31 3.6867514742397456E-4 0.0 0.0 0.0768687682378987 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2620 0.0 33.540073 1 TTATACA 2795 0.0 31.572453 2 TCGCCGA 65 8.731149E-11 31.307692 1 CGCCGAG 65 8.731149E-11 31.307692 2 CGTCTTC 960 0.0 31.026043 37 TATACAC 2920 0.0 30.664385 3 GCGCACG 25 0.005493817 29.6 34 CTACGTT 25 0.005493817 29.6 30 CACGGTA 35 8.8633323E-4 26.428572 2 ACGGTAC 35 8.8633323E-4 26.428572 3 CCGTCTT 3005 0.0 25.056574 37 GCCGTCT 3085 0.0 24.406809 36 GCGCGCC 60 3.721618E-5 21.583334 11 TATCGCG 60 3.721618E-5 21.583334 7 ATCGCGC 60 3.721618E-5 21.583334 8 GCCGAGC 95 7.1231625E-9 21.421053 3 TGCCGTC 3635 0.0 20.764786 35 GTATCAA 635 0.0 20.68504 1 TTAGAAC 45 0.0038232424 20.555557 3 CACGACA 45 0.0038232424 20.555557 19 >>END_MODULE