ERR1630995.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630995.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	625515
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATG	10875	1.738567420445553	No Hit
CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGT	8960	1.4324196861785887	No Hit
TCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT	8354	1.335539515439278	TruSeq Adapter, Index 5 (95% over 21bp)
ACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCC	5760	0.9208412268290929	No Hit
CTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTTC	2675	0.42764761836246934	Illumina Paired End PCR Primer 2 (95% over 23bp)
CATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTC	2425	0.3876805512257899	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1485	0.2374043787918755	No Hit
CACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCG	1457	0.23292806727256743	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1394	0.2228563663541242	No Hit
TTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTA	880	0.1406840763211114	No Hit
TATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTAT	797	0.12741501003173386	No Hit
ACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGT	755	0.12070054275277171	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	1140	0.0	31.64474	1
GGTATCA	215	0.0	30.116278	1
CGTCTTC	480	0.0	29.677082	37
TTATACA	1240	0.0	29.092741	2
TATACAC	1345	0.0	27.2342	3
GTATCAA	895	0.0	25.631285	1
CCGTCTT	1415	0.0	24.710247	37
CGGATCG	45	1.32227E-4	24.666668	37
GCCGTCT	1460	0.0	23.948631	36
GATAGTC	55	1.9008623E-5	23.545454	7
GCTACGA	40	0.001930208	23.125002	2
GTTTCGG	50	2.7001955E-4	22.199999	30
CCATTAA	70	5.0957897E-6	21.142857	1
TGCCGTC	1690	0.0	20.579884	35
GCTCGGA	55	5.139494E-4	20.181818	11
ATGCCGT	1775	0.0	19.490143	34
CGAACTA	70	1.2180703E-4	18.5	29
GCGAACT	70	1.2180703E-4	18.5	28
TATATCG	100	2.8697286E-7	18.499998	5
GACGATT	50	0.0070313867	18.499998	14