##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630988.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 144090 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.276021930737734 31.0 31.0 34.0 28.0 34.0 2 31.31356096883892 31.0 31.0 34.0 28.0 34.0 3 30.763786522312444 31.0 31.0 34.0 26.0 34.0 4 34.89137344715109 37.0 35.0 37.0 32.0 37.0 5 35.10764105767229 35.0 35.0 37.0 32.0 37.0 6 35.31338746616698 37.0 35.0 37.0 33.0 37.0 7 35.295391769033245 37.0 35.0 37.0 32.0 37.0 8 35.33207717398848 37.0 35.0 37.0 32.0 37.0 9 37.115427857589005 39.0 37.0 39.0 33.0 39.0 10 36.957464084946906 39.0 37.0 39.0 33.0 39.0 11 36.975168297591786 39.0 37.0 39.0 33.0 39.0 12 36.872635158581446 39.0 37.0 39.0 33.0 39.0 13 37.024075230758555 39.0 37.0 39.0 33.0 39.0 14 37.87912415851204 40.0 37.0 41.0 33.0 41.0 15 37.885321673953776 39.0 37.0 41.0 33.0 41.0 16 37.91389409396905 40.0 37.0 41.0 33.0 41.0 17 37.95809563467277 40.0 37.0 41.0 33.0 41.0 18 38.07338469012423 40.0 37.0 41.0 33.0 41.0 19 38.05282115344576 40.0 37.0 41.0 33.0 41.0 20 38.01559442015407 40.0 37.0 41.0 33.0 41.0 21 37.96248872232633 40.0 37.0 41.0 33.0 41.0 22 37.78532167395378 39.0 37.0 41.0 33.0 41.0 23 37.83289610660004 39.0 37.0 41.0 33.0 41.0 24 37.73174404885835 39.0 37.0 41.0 32.0 41.0 25 37.64178638351031 39.0 37.0 41.0 32.0 41.0 26 37.402907904781735 39.0 36.0 41.0 32.0 41.0 27 37.31994586716635 39.0 36.0 41.0 31.0 41.0 28 37.27818030397668 39.0 36.0 41.0 31.0 41.0 29 37.23157054618641 39.0 36.0 40.0 31.0 41.0 30 36.992643486709696 39.0 36.0 40.0 31.0 41.0 31 36.81323478381567 39.0 35.0 40.0 31.0 41.0 32 36.53783746269693 38.0 35.0 40.0 30.0 41.0 33 36.135720730099244 38.0 35.0 40.0 30.0 41.0 34 36.1227566104518 38.0 35.0 40.0 30.0 41.0 35 36.07571656603512 38.0 35.0 40.0 29.0 41.0 36 35.98297591782914 38.0 35.0 40.0 28.0 41.0 37 35.913116801998754 38.0 35.0 40.0 28.0 41.0 38 35.77953362481782 38.0 35.0 40.0 27.0 41.0 39 35.52738566173919 38.0 34.0 40.0 26.0 41.0 40 35.031272121590675 38.0 34.0 40.0 26.0 41.0 41 35.05300853633146 38.0 34.0 40.0 26.0 41.0 42 34.82660142966202 38.0 33.0 40.0 24.0 41.0 43 33.83540148518287 37.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 5.0 11 10.0 12 5.0 13 8.0 14 6.0 15 3.0 16 6.0 17 5.0 18 16.0 19 15.0 20 35.0 21 60.0 22 139.0 23 240.0 24 421.0 25 615.0 26 990.0 27 1506.0 28 2091.0 29 2796.0 30 3538.0 31 4453.0 32 5345.0 33 6839.0 34 8759.0 35 11381.0 36 15509.0 37 22607.0 38 31231.0 39 25447.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.56506350197793 23.48254563120272 19.038101186758276 24.91428968006107 2 11.9286557012978 21.84259837601499 41.373447151086125 24.855298771601085 3 13.200777291970297 30.852245124574917 36.82559511416476 19.121382469290026 4 8.909709209521827 19.38233048788951 30.23873967659102 41.469220625997636 5 12.470678048441947 37.83885071830106 31.126379346241933 18.56409188701506 6 26.37934624193213 37.21215906724964 15.71170796030259 20.69678673051565 7 21.686445971267958 34.93996807550837 17.367617461308903 26.00596849191478 8 28.81185370254702 28.545353598445416 23.702547019224095 18.94024567978347 9 20.428204594350753 12.210424040530224 15.667985286973419 51.69338607814561 10 15.819279616906101 26.18641127073357 28.593934346588938 29.400374765771392 11 29.298355194670002 20.563536678464846 22.051495593032133 28.086612533833023 12 18.310777985980984 29.4316052467208 21.958498160871677 30.29911860642654 13 33.79762648344784 16.548684849746685 23.749045735304325 25.904642931501144 14 23.49642584495801 24.756749253938512 23.394406273856617 28.352418627246863 15 27.32528280935526 27.4460406690263 19.167881185370256 26.060795336248177 16 28.823651884239016 22.606704143243807 19.030467069192866 29.53917690332431 17 18.40238739676591 34.34450690540634 20.089527378721634 27.16357831910611 18 24.753973211187454 18.250399056145465 24.723436740925813 32.272190991741276 19 23.152890554514542 26.779790408772296 29.244916371712126 20.822402665001043 20 19.662710805746407 28.162259698799364 23.408980498299677 28.76604899715456 21 28.08036643764314 25.331390103407593 25.267541120133252 21.320702338816016 22 25.331390103407593 33.681726698591156 23.367339857033798 17.61954334096745 23 28.900687070580886 20.993823304878894 24.474980914706087 25.63050870983413 24 25.60136026094802 25.449371920327575 25.803317371087513 23.145950447636892 25 26.021930737733364 29.86744395863696 23.238947879797347 20.871677423832327 26 23.232701783607467 30.297036574363247 28.204594350753005 18.265667291276287 27 23.205635366784648 34.531889791102785 25.267541120133252 16.99493372197932 28 18.646679158859047 27.357207300992435 30.489277534874038 23.506836005274483 29 23.741411617738915 22.10979249080436 28.735512526892915 25.413283364563817 30 25.15927545284197 25.343882295787356 31.376223193837184 18.120619057533485 31 22.156291206884585 25.90533694218891 22.637240613505448 29.301131237421057 32 32.1070164480533 21.341522659448955 27.970712748976332 18.58074814352141 33 21.79124158512041 25.55000347005344 32.6538968700118 20.00485807481435 34 18.31771809285863 29.615518078978415 26.182247206606984 25.88451662155597 35 23.186897078215004 20.75577763897564 38.83753209799431 17.219793184815046 36 23.791380387257963 26.39322645568742 23.47629953501284 26.33909362204178 37 20.325491012561596 23.972517176764523 30.456659032549098 25.245332778124784 38 20.638489832743424 19.465611770421265 29.877854118953433 30.018044277881877 39 28.31286001804428 20.81615656881116 26.516760358109515 24.35422305503505 40 17.736137136511903 19.888958289957664 40.83767090013186 21.53723367339857 41 23.579013116802 22.2520646817961 24.645707543896176 29.523214657505726 42 21.603164688736207 19.40315080852245 37.36345339718232 21.630231105559027 43 23.45062113956555 19.12068845860226 33.08557151780138 24.343118884030815 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9.0 1 13.0 2 17.0 3 44.0 4 71.0 5 71.0 6 96.0 7 121.0 8 138.0 9 155.0 10 247.5 11 340.0 12 340.0 13 560.5 14 781.0 15 2053.5 16 3326.0 17 3128.5 18 2931.0 19 2931.0 20 2414.0 21 1897.0 22 1508.5 23 1120.0 24 1104.5 25 1089.0 26 1089.0 27 1212.0 28 1335.0 29 1397.0 30 1459.0 31 1702.0 32 1945.0 33 1945.0 34 2431.0 35 2917.0 36 3300.0 37 3683.0 38 4156.5 39 4630.0 40 4630.0 41 5082.0 42 5534.0 43 6211.0 44 6888.0 45 7976.0 46 9064.0 47 9064.0 48 11037.0 49 13010.0 50 18714.0 51 24418.0 52 17822.5 53 11227.0 54 11227.0 55 16878.0 56 22529.0 57 18120.5 58 13712.0 59 8936.0 60 4160.0 61 4160.0 62 3390.0 63 2620.0 64 1993.5 65 1367.0 66 1143.0 67 919.0 68 919.0 69 690.0 70 461.0 71 342.0 72 223.0 73 131.0 74 39.0 75 39.0 76 33.0 77 27.0 78 29.0 79 31.0 80 20.5 81 10.0 82 10.0 83 7.0 84 4.0 85 8.0 86 12.0 87 10.0 88 8.0 89 8.0 90 4.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 144090.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.780415018391285 #Duplication Level Percentage of deduplicated Percentage of total 1 70.49290656042211 18.173363869803595 2 11.513715777855547 5.9365674231383165 3 4.972137723100116 3.845513220903602 4 2.8185317791477105 2.9065167603581092 5 1.9490133792769266 2.5123186897078216 6 1.3029315960912053 2.015407037268374 7 0.9906587342181065 1.7877715316815879 8 0.829138288421676 1.7100423346519535 9 0.6030096643066735 1.3991255465334167 >10 4.046087167200581 19.92921090984801 >50 0.2853527875736937 5.076688180997987 >100 0.1561364309365494 7.355125268929141 >500 0.018844052009583546 3.44021097924908 >1k 0.013460037149702533 9.195641612880838 >5k 0.00807602228982152 14.716496634048164 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTT 7953 5.5194669997917964 RNA PCR Primer, Index 46 (95% over 21bp) ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATG 6969 4.836560483031438 No Hit CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGT 6283 4.360469151224929 No Hit ACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCC 3905 2.71011173572073 No Hit CATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTC 2622 1.8196960233187593 No Hit CTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTC 2617 1.8162259698799361 RNA PCR Primer, Index 46 (95% over 22bp) TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2318 1.6087167742383235 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1788 1.2408911097230897 No Hit CACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCG 957 0.6641682281907141 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 893 0.6197515441737802 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 761 0.5281421333888542 No Hit TTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTA 685 0.4753973211187452 No Hit ACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGT 585 0.4059962523422861 No Hit TATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTAT 541 0.375459782080644 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 535 0.37129571795405647 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 481 0.33381914081476854 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 435 0.30189464917759734 No Hit GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT 345 0.2394336872787841 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 343 0.2380456659032549 No Hit TCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC 334 0.2317995697133736 No Hit GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 328 0.22763550558678605 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 318 0.2206953987091401 No Hit CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG 312 0.21653133458255255 No Hit ATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCT 283 0.19640502463737944 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 257 0.17836074675550004 No Hit GAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTG 244 0.16933860781456034 No Hit CGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTG 234 0.16239850093691444 No Hit GTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGG 233 0.16170449024914985 No Hit GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC 226 0.1568464154347977 No Hit GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGT 220 0.15268235130821015 No Hit GGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAG 212 0.14713026580609342 No Hit GTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTG 208 0.14435422305503504 No Hit GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAG 203 0.14088416961621208 No Hit GCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCG 196 0.13602609480185995 No Hit GAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCG 180 0.12492192379762648 No Hit GGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATG 177 0.12283989173433271 No Hit GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA 176 0.12214588104656812 No Hit GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG 170 0.11798181691998057 No Hit GCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGG 169 0.11728780623221598 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 164 0.11381775279339303 No Hit ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG 150 0.10410160316468875 No Hit CTTTACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTA 150 0.10410160316468875 No Hit TCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAG 149 0.10340759247692415 No Hit GTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAC 146 0.10132556041363038 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 6.940106877645916E-4 0.0 10 0.0 0.0 0.0 6.940106877645916E-4 0.0 11 0.0 0.0 0.0 6.940106877645916E-4 0.0 12 0.0 0.0 0.0 6.940106877645916E-4 0.0 13 0.0 0.0 0.0 6.940106877645916E-4 0.0 14 0.0 0.0 0.0 6.940106877645916E-4 0.0 15 0.0 0.0 0.0 6.940106877645916E-4 0.0 16 0.0 0.0 0.0 6.940106877645916E-4 0.0 17 0.0 0.0 0.0 0.0027760427510583664 0.0 18 0.0 0.0 0.0 0.003470053438822958 0.0 19 0.0 0.0 0.0 0.003470053438822958 0.0 20 0.0 0.0 0.0 0.00416406412658755 0.0 21 0.0 0.0 0.0 0.005552085502116733 0.0 22 0.0 0.0 0.0 0.006246096189881324 0.0 23 0.0 0.0 0.0 0.007634117565410508 0.0 24 0.0 0.0 0.0 0.0083281282531751 0.0 25 0.0 0.0 0.0 0.0083281282531751 0.0 26 0.0 0.0 0.0 0.010410160316468874 0.0 27 0.0 0.0 0.0 0.010410160316468874 0.0 28 0.0 0.0 0.0 0.020126309945173157 0.0 29 0.0 0.0 0.0 0.054132833645638145 0.0 30 0.0 0.0 0.0 0.07703518634186966 0.0 31 0.0 0.0 0.0 0.12700395586092025 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCCCGG 20 0.001836597 37.0 23 TGGGGAC 20 0.001836597 37.0 3 GAGCCCG 20 0.001836597 37.0 22 CCGCGTG 20 0.001836597 37.0 37 TGCCGCG 20 0.001836597 37.0 35 ATGCCGC 25 1.2282727E-4 36.999996 34 CTTATAC 715 0.0 34.412586 1 CGTCTTC 335 0.0 32.58209 37 TTATACA 760 0.0 32.375 2 CATGCCG 35 2.37394E-5 31.714285 33 GGTATCA 230 0.0 31.369566 1 GATGTCC 30 3.5840058E-4 30.833334 26 TGTCCTG 30 3.5840058E-4 30.833334 28 TATACAC 815 0.0 30.190184 3 CCGGGGA 25 0.0054805954 29.599998 26 GAAGCAA 25 0.0054805954 29.599998 31 CATATAG 25 0.0054805954 29.599998 3 TGTGGGG 25 0.0054805954 29.599998 1 CCAGCAA 25 0.0054805954 29.599998 30 CCATGCC 25 0.0054805954 29.599998 32 >>END_MODULE