##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630968.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 541151 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.198314333707227 31.0 31.0 34.0 28.0 34.0 2 31.245443508373818 31.0 31.0 34.0 28.0 34.0 3 30.709454477585737 31.0 31.0 34.0 26.0 34.0 4 34.87237388455348 37.0 35.0 37.0 32.0 37.0 5 35.03815386093715 35.0 35.0 37.0 32.0 37.0 6 35.233962424535854 37.0 35.0 37.0 32.0 37.0 7 35.217687854221836 37.0 35.0 37.0 32.0 37.0 8 35.26109717989988 37.0 35.0 37.0 32.0 37.0 9 37.03565548248086 39.0 37.0 39.0 33.0 39.0 10 36.84260215725371 39.0 37.0 39.0 33.0 39.0 11 36.88698718102711 39.0 37.0 39.0 33.0 39.0 12 36.80392348900769 39.0 37.0 39.0 33.0 39.0 13 36.91789167903229 39.0 37.0 39.0 33.0 39.0 14 37.89842206703859 40.0 37.0 41.0 33.0 41.0 15 37.856649992331164 39.0 37.0 41.0 33.0 41.0 16 37.86296061542897 39.0 37.0 41.0 33.0 41.0 17 37.74425807214622 39.0 37.0 41.0 32.0 41.0 18 37.88669890658984 40.0 37.0 41.0 33.0 41.0 19 37.90341143229893 40.0 37.0 41.0 33.0 41.0 20 37.93363959412437 40.0 37.0 41.0 33.0 41.0 21 37.952375584633494 40.0 37.0 41.0 33.0 41.0 22 37.75828558018002 39.0 37.0 41.0 32.0 41.0 23 37.8566666235487 39.0 37.0 41.0 33.0 41.0 24 37.69670572538903 39.0 37.0 41.0 32.0 41.0 25 37.63694421704847 39.0 37.0 41.0 32.0 41.0 26 37.59345727902193 39.0 37.0 41.0 32.0 41.0 27 37.43124562275594 39.0 36.0 41.0 32.0 41.0 28 37.54534316669469 39.0 37.0 41.0 32.0 41.0 29 37.49957590395287 39.0 37.0 41.0 32.0 41.0 30 37.44351206964415 39.0 37.0 41.0 32.0 41.0 31 37.44611947497094 39.0 37.0 41.0 32.0 41.0 32 37.273492980702244 39.0 36.0 40.0 31.0 41.0 33 37.21780981648375 39.0 36.0 40.0 31.0 41.0 34 37.14595926090869 39.0 36.0 40.0 31.0 41.0 35 37.15236782339864 39.0 36.0 40.0 31.0 41.0 36 37.14918756502344 39.0 36.0 40.0 31.0 41.0 37 37.09140517156949 39.0 36.0 40.0 31.0 41.0 38 37.05932355294548 39.0 36.0 40.0 31.0 41.0 39 36.92571019918655 39.0 36.0 40.0 31.0 41.0 40 36.762216091257336 39.0 35.0 40.0 30.0 41.0 41 36.7692566400136 39.0 35.0 40.0 30.0 41.0 42 36.71647839512447 39.0 35.0 40.0 30.0 41.0 43 35.950045366265606 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 16.0 10 27.0 11 26.0 12 21.0 13 20.0 14 10.0 15 15.0 16 16.0 17 20.0 18 33.0 19 34.0 20 72.0 21 130.0 22 271.0 23 483.0 24 925.0 25 1470.0 26 2572.0 27 3790.0 28 5447.0 29 7818.0 30 10782.0 31 14376.0 32 18517.0 33 23530.0 34 30726.0 35 40813.0 36 56013.0 37 81442.0 38 133413.0 39 108320.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.00012565808804 24.407235688375334 17.297390192386228 26.2952484611504 2 12.189204122324453 20.66225508222289 43.175195093421245 23.97334570203141 3 12.837821606169072 30.19138835556065 36.202279955132674 20.76851008313761 4 10.346834802116229 20.641558455957764 34.924078491955115 34.087528249970894 5 11.434516428871055 38.47650655731949 35.92176675271782 14.167210261091636 6 25.989049267210074 40.461534765712344 17.193537478448714 16.355878488628868 7 21.83900611844014 34.976189640229805 21.641094629779857 21.543709611550195 8 24.474499723736997 34.74464613388869 23.622242220748 17.15861192162631 9 20.821914770553875 14.67704947417634 18.08552511221452 46.41551064305526 10 13.56146436022478 28.426261801234777 33.16541963333709 24.846854205203353 11 28.168293138144435 22.449926175873276 25.74493995206514 23.63684073391715 12 17.61061145595222 27.745675421462774 26.5171828195827 28.126530303002305 13 29.5058126105283 18.853702571001442 27.04365325020188 24.596831568268378 14 21.537057124536403 24.327775426821717 24.044859937429663 30.09030751121221 15 24.364548896703507 29.609480533159875 20.13744777335716 25.888522796779455 16 27.134016198805877 26.08994532025257 21.729424874018527 25.046613606923025 17 18.23354294827137 34.901903535242475 22.90266487542294 23.961888641063215 18 23.583620837806823 23.635916777387457 23.43597258436185 29.344489800443867 19 20.718986013146054 28.04152630227053 25.50674395871023 25.732743725873185 20 18.97030588504872 25.153053399143676 27.265402817328248 28.611237898479352 21 23.828654109481455 23.71704016069452 24.895454318665216 27.55885141115881 22 18.133570851758567 32.55320603676238 28.6071724897487 20.70605062173035 23 22.08052835530194 23.11443571202862 25.615955620519966 29.189080312149475 24 21.621137168738485 29.203863616624563 28.633597646497925 20.541401568139023 25 18.672052717263757 31.216056146990397 25.992929884634787 24.118961251111056 26 21.81830949217501 25.321583070159715 25.07082126800098 27.78928616966429 27 17.60654604722157 32.04004058017079 30.720630655768904 19.632782716838737 28 17.699496074108705 23.09706532927039 28.540278036998917 30.663160559621993 29 17.902027345417455 24.203041295313138 31.792789812824886 26.102141546444525 30 17.96485638943659 25.146585703435825 32.493888027556075 24.394669879571506 31 19.87042433627583 23.14289357314317 28.275841678200724 28.71084041238028 32 21.34210229677114 28.67924109906477 31.015187997435095 18.963468606728988 33 18.04745810319116 24.730805265073887 29.85894879617704 27.36278783555791 34 19.058081755369574 30.293762739050656 29.95097486653448 20.697180639045293 35 19.816834857553623 27.39309360973185 34.235361294721805 18.554710237992722 36 22.564681576861172 24.74392544779553 23.204429078020738 29.48696389732256 37 20.13985006033436 27.01685851084078 29.282399921648487 23.560891507176372 38 20.756313856945656 23.538162176545917 29.95929047530172 25.746233491206706 39 25.168575868842524 24.94497838865677 26.153328738189526 23.73311700431118 40 18.626594056002855 22.380814227452227 37.65898981984696 21.333601896697964 41 21.35707039255217 26.221147147469004 25.53852806333168 26.883254396647143 42 22.07498461612378 23.083390772630928 33.93137959645275 20.910245014792544 43 22.064821094297155 22.57872571611251 32.875482074319365 22.480971115270968 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 10.0 1 11.5 2 13.0 3 48.5 4 84.0 5 84.0 6 113.0 7 142.0 8 157.0 9 172.0 10 275.0 11 378.0 12 378.0 13 560.5 14 743.0 15 1617.0 16 2491.0 17 2806.0 18 3121.0 19 3121.0 20 3363.5 21 3606.0 22 4567.0 23 5528.0 24 7279.5 25 9031.0 26 9031.0 27 11074.5 28 13118.0 29 15550.0 30 17982.0 31 20539.0 32 23096.0 33 23096.0 34 25800.5 35 28505.0 36 30341.0 37 32177.0 38 34360.5 39 36544.0 40 36544.0 41 37201.5 42 37859.0 43 37620.0 44 37381.0 45 36744.5 46 36108.0 47 36108.0 48 36766.5 49 37425.0 50 54698.5 51 71972.0 52 49318.5 53 26665.0 54 26665.0 55 40146.5 56 53628.0 57 42960.5 58 32293.0 59 21496.0 60 10699.0 61 10699.0 62 9160.0 63 7621.0 64 6036.0 65 4451.0 66 3555.5 67 2660.0 68 2660.0 69 2185.5 70 1711.0 71 1446.5 72 1182.0 73 1226.5 74 1271.0 75 1271.0 76 1092.0 77 913.0 78 656.5 79 400.0 80 254.0 81 108.0 82 108.0 83 72.0 84 36.0 85 27.5 86 19.0 87 13.5 88 8.0 89 8.0 90 4.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 541151.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.587494768685715 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8361885358267 31.122495992420703 2 13.854903791095932 11.523814778656918 3 4.529350888581738 5.65093069153305 4 1.9989581578551074 3.325266477304836 5 1.0647252292253786 2.213962745024907 6 0.6990918292930555 1.7444086676133521 7 0.4660811764997682 1.3568203942626895 8 0.33854815305911423 1.1263495635435299 9 0.2495673415384184 0.9340992459597398 >10 1.7264854924833646 14.026184314364103 >50 0.15933362461582973 4.547080148217121 >100 0.07007108981584968 4.8839627699600285 >500 0.001338938021958911 0.3560004785764958 >1k 0.002677876043917822 1.8306739938477468 >5k 8.926253479726074E-4 2.4697301188419467 >10k+ 0.0017852506959452148 12.888219619872856 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGT 21303 3.936609190410809 No Hit ATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATG 19323 3.570722404652306 No Hit TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT 18793 3.472783012504828 RNA PCR Primer, Index 39 (95% over 23bp) ACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCC 10018 1.8512393028932774 No Hit CTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTC 7891 1.458188195161794 RNA PCR Primer, Index 39 (95% over 24bp) CATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTC 5415 1.0006449216577258 RNA PCR Primer, Index 39 (95% over 21bp) CACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCG 2264 0.4183675166450769 No Hit TTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTA 2015 0.37235448146635597 No Hit TATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTAT 1573 0.2906767242414779 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1396 0.25796866309033895 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1375 0.25408804566562754 No Hit ACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGT 1240 0.22914121936391135 No Hit TCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTCT 796 0.14709387952715602 Illumina PCR Primer Index 11 (95% over 24bp) ATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCT 616 0.11383144445820112 Illumina PCR Primer Index 11 (95% over 21bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 1.847913059386382E-4 0.0 17 0.0 0.0 0.0 1.847913059386382E-4 0.0 18 0.0 0.0 0.0 3.695826118772764E-4 0.0 19 0.0 0.0 0.0 7.391652237545528E-4 0.0 20 0.0 0.0 0.0 7.391652237545528E-4 0.0 21 0.0 0.0 0.0 7.391652237545528E-4 0.0 22 0.0 0.0 0.0 7.391652237545528E-4 0.0 23 0.0 0.0 0.0 9.23956529693191E-4 0.0 24 0.0 0.0 0.0 9.23956529693191E-4 0.0 25 0.0 0.0 0.0 0.0011087478356318291 0.0 26 0.0 0.0 0.0 0.0011087478356318291 0.0 27 0.0 0.0 0.0 0.00203270436532502 0.0 28 0.0 0.0 0.0 0.005358947872220508 0.0 29 0.0 0.0 0.0 0.011457060968195569 0.0 30 0.0 0.0 0.0 0.02365328716014569 0.0 31 0.0 0.0 0.0 0.06467695707852338 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2425 0.0 35.321648 1 CGTCTTC 1135 0.0 33.088108 37 TTATACA 2645 0.0 32.24386 2 TTACTCG 35 2.3859906E-5 31.714285 19 TATACAC 2865 0.0 30.155323 3 GATACAC 40 5.9344093E-5 27.750002 3 ATTCCGG 40 5.9344093E-5 27.750002 37 GCTCTAG 90 5.456968E-12 26.722221 1 CGTTACT 35 8.863308E-4 26.42857 17 ACCGTTA 35 8.863308E-4 26.42857 8 CGCCGAG 50 9.079487E-6 25.899998 2 GTATCAA 575 0.0 23.808697 1 CCGTCTT 3150 0.0 23.668253 37 GGTATCA 205 0.0 23.463413 1 GCCGTCT 3215 0.0 23.189734 36 TCGGCGT 40 0.0019298736 23.125002 11 CGCACCA 50 2.699543E-4 22.199999 18 CCGCCTA 50 2.699543E-4 22.199999 15 GCCGAGC 60 3.7215977E-5 21.583332 3 CGGCGTA 45 0.0038232314 20.555555 12 >>END_MODULE