ERR1630941.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630941.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	726128
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGT	7782	1.071711874490448	No Hit
ATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATG	4738	0.6525020382081397	No Hit
TCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTT	2804	0.38615781239671243	Illumina PCR Primer Index 11 (95% over 22bp)
ACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCC	2258	0.3109644580569817	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1923	0.26482934138333736	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1518	0.20905405107639424	No Hit
GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG	1056	0.1454289050966221	No Hit
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC	996	0.13716589912522312	No Hit
CATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTC	933	0.12848974285525416	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATTACG	35	2.3871056E-5	31.714285	1
CTTATAC	1020	0.0	31.37745	1
TATCGCC	25	0.0054950276	29.599998	33
GGTATCA	395	0.0	29.037973	1
TTATACA	1140	0.0	28.561403	2
TATACAC	1190	0.0	27.205883	3
CCGTCTT	440	0.0	25.227272	37
GCCGTCT	440	0.0	24.806818	36
CCGATGT	55	1.9014074E-5	23.545454	14
GTATCAA	1225	0.0	23.257143	1
TACCGCG	75	3.736841E-7	22.2	8
AACGGCC	95	7.1340764E-9	21.421053	37
GGTACCG	80	6.9528505E-7	20.8125	6
GGCCGCA	80	6.9528505E-7	20.8125	33
TGCCGTC	525	0.0	20.790476	35
TAGACGC	45	0.003824471	20.555557	30
TCGCCCG	55	5.140586E-4	20.181818	10
TCGAGCT	65	6.897655E-5	19.923077	27
CGTCTTC	140	3.6379788E-12	19.821428	37
GGCCGTT	85	1.244016E-6	19.588236	14