##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630934.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 919440 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43786543983294 31.0 31.0 34.0 28.0 34.0 2 31.45190768293744 31.0 31.0 34.0 28.0 34.0 3 30.932511093709213 31.0 31.0 34.0 27.0 34.0 4 35.080432654659354 37.0 35.0 37.0 32.0 37.0 5 35.25678021404333 37.0 35.0 37.0 33.0 37.0 6 35.441126120247105 37.0 35.0 37.0 33.0 37.0 7 35.44466958148438 37.0 35.0 37.0 33.0 37.0 8 35.471839380492476 37.0 35.0 37.0 33.0 37.0 9 37.25675737405377 39.0 37.0 39.0 34.0 39.0 10 37.08243496041069 39.0 37.0 39.0 33.0 39.0 11 37.14290220133994 39.0 37.0 39.0 33.0 39.0 12 37.068938701818496 39.0 37.0 39.0 33.0 39.0 13 37.15022404942139 39.0 37.0 39.0 33.0 39.0 14 38.26889845993213 40.0 38.0 41.0 33.0 41.0 15 38.27788653963282 40.0 38.0 41.0 33.0 41.0 16 38.276730401113724 40.0 38.0 41.0 33.0 41.0 17 38.217736883320285 40.0 38.0 41.0 33.0 41.0 18 38.2913719220395 40.0 38.0 41.0 33.0 41.0 19 38.29531562690333 40.0 38.0 41.0 34.0 41.0 20 38.273816671017144 40.0 38.0 41.0 34.0 41.0 21 38.19289785086574 40.0 38.0 41.0 33.0 41.0 22 38.081553989384844 40.0 37.0 41.0 33.0 41.0 23 38.125712390150525 40.0 37.0 41.0 33.0 41.0 24 38.080753502131735 40.0 37.0 41.0 33.0 41.0 25 38.04945836596189 40.0 37.0 41.0 33.0 41.0 26 37.945865961889844 40.0 37.0 41.0 33.0 41.0 27 37.83326046289046 40.0 37.0 41.0 33.0 41.0 28 37.84100756982511 40.0 37.0 41.0 33.0 41.0 29 37.73605564256504 40.0 37.0 41.0 32.0 41.0 30 37.69394849038545 40.0 37.0 41.0 32.0 41.0 31 37.659683067954404 40.0 37.0 41.0 32.0 41.0 32 37.526990341947275 39.0 37.0 41.0 32.0 41.0 33 37.55290829200383 39.0 37.0 41.0 32.0 41.0 34 37.541537240059164 39.0 37.0 41.0 32.0 41.0 35 37.550598190202734 40.0 37.0 41.0 32.0 41.0 36 37.5376381275559 40.0 37.0 41.0 32.0 41.0 37 37.49633146262943 40.0 37.0 41.0 32.0 41.0 38 37.45118224136431 39.0 37.0 41.0 32.0 41.0 39 37.36047050378491 39.0 37.0 41.0 31.0 41.0 40 37.24966392586792 39.0 36.0 41.0 31.0 41.0 41 37.224190811798486 39.0 36.0 41.0 31.0 41.0 42 37.181063473418604 39.0 36.0 41.0 31.0 41.0 43 36.491013007917864 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 15.0 10 18.0 11 18.0 12 18.0 13 16.0 14 9.0 15 15.0 16 20.0 17 15.0 18 22.0 19 35.0 20 82.0 21 171.0 22 391.0 23 672.0 24 1321.0 25 2155.0 26 3573.0 27 5379.0 28 7960.0 29 11450.0 30 15477.0 31 20794.0 32 27174.0 33 35156.0 34 46143.0 35 61943.0 36 85819.0 37 126817.0 38 222134.0 39 244621.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.58988079700688 22.71165056991212 15.338466892891326 25.36000174018968 2 13.309732010789176 21.40085269294353 41.424345253632644 23.86507004263465 3 14.18852779953015 28.351387801270338 34.719829461411294 22.74025493778822 4 11.504393978943705 19.63107978769686 36.47676846776299 32.38775776559645 5 12.611372139563212 37.778647872618116 35.650939702427564 13.959040285391108 6 27.937331419124682 39.55048725311059 17.570042634647177 14.942138693117549 7 23.97100408944575 33.627207865657354 22.132058644392238 20.269729400504655 8 24.739297833463848 35.095057861306884 22.485860958844516 17.679783346384756 9 23.260897937875228 14.797920473331594 19.151222483250674 42.7899591055425 10 14.24791177238319 28.581201600974502 33.43034890803098 23.74053771861133 11 31.019424867310537 22.44366135908814 25.499760723918907 21.037153049682416 12 19.93278517358392 26.23031410423736 28.88160184460106 24.955298877577654 13 29.175041329504914 20.22002523275037 26.691246845906203 23.91368659183851 14 21.48623074915166 22.37383624815105 25.803858870616896 30.336074132080398 15 24.060406334290438 28.634821195510312 21.965217958757506 25.339554511441747 16 25.54522317932655 26.90431131993387 23.03510832680762 24.51535717393196 17 20.533476898981988 31.420973636126337 24.414099886887673 23.631449578004002 18 24.818258940224485 25.066018446010613 25.043939789437047 25.071782824327855 19 25.42177847385365 27.481184199077703 24.771491342556338 22.325545984512313 20 23.679087270512486 26.28121465239711 24.72950926651005 25.310188810580353 21 25.283542156095013 26.909966936396067 24.846645784390496 22.95984512311842 22 23.172800835291046 30.284738536500477 24.92234403549987 21.620116592708605 23 23.318541721047595 25.19642391020621 25.78776211607065 25.69727225267554 24 25.070477682067345 27.81997737753415 26.303402070825722 20.80614286957278 25 22.333594361785437 29.38451666231619 24.93213260245367 23.349756373444706 26 25.58535630383712 26.91975550334986 25.15009135995824 22.344796832854783 27 24.18809275210998 29.541242495432 25.3569564082485 20.91370834420952 28 20.944596711041505 26.89136865918385 26.899417036456974 25.264617593317674 29 25.775472026450885 25.582746019316104 26.387801270338468 22.253980683894543 30 23.488210214913423 26.170060036543987 26.97533281127643 23.366396937266163 31 22.16131558339859 27.061254676759766 26.833181066736273 23.944248673105367 32 24.389737231358218 27.828460802227443 26.645675628643524 21.136126337770815 33 20.54522317932655 25.291155485947968 28.30733924997825 25.85628208474724 34 21.042699904289567 28.315061341686242 28.492343165405032 22.14989558861916 35 21.23520838771426 27.49053771861133 30.365983642217003 20.90827025145741 36 22.96919864265205 25.35217088662664 24.81118941964674 26.86744105107457 37 21.92236578787088 26.930522926999046 27.779082920038284 23.368028365091796 38 21.842534586269906 24.706125467675978 28.586204646306445 24.865135299747674 39 24.484795092665102 25.42438875837466 26.190289741581836 23.900526407378404 40 21.019316105455495 24.386583137561992 32.48749238667015 22.106608370312365 41 22.47639867745584 25.986687548942832 25.882928739232575 25.65398503436875 42 22.92134342643348 24.580070477682067 30.1749978247629 22.32358827112155 43 23.033911946402156 24.131971634908204 29.698947185243192 23.135169233446444 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 10.0 2 17.0 3 63.0 4 109.0 5 109.0 6 167.5 7 226.0 8 240.0 9 254.0 10 331.0 11 408.0 12 408.0 13 692.0 14 976.0 15 2282.0 16 3588.0 17 4122.5 18 4657.0 19 4657.0 20 4948.0 21 5239.0 22 6621.5 23 8004.0 24 10456.0 25 12908.0 26 12908.0 27 16599.5 28 20291.0 29 24313.5 30 28336.0 31 32736.5 32 37137.0 33 37137.0 34 42063.0 35 46989.0 36 50381.0 37 53773.0 38 57204.5 39 60636.0 40 60636.0 41 62252.0 42 63868.0 43 65172.0 44 66476.0 45 66575.5 46 66675.0 47 66675.0 48 65547.0 49 64419.0 50 63901.0 51 63383.0 52 79391.5 53 95400.0 54 95400.0 55 72486.5 56 49573.0 57 57162.5 58 64752.0 59 53467.0 60 42182.0 61 42182.0 62 31690.0 63 21198.0 64 17635.5 65 14073.0 66 11761.5 67 9450.0 68 9450.0 69 7795.5 70 6141.0 71 4898.0 72 3655.0 73 2863.0 74 2071.0 75 2071.0 76 1620.0 77 1169.0 78 933.0 79 697.0 80 549.0 81 401.0 82 401.0 83 279.5 84 158.0 85 122.5 86 87.0 87 64.5 88 42.0 89 42.0 90 28.0 91 14.0 92 9.0 93 4.0 94 2.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 919440.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.12019967958716 #Duplication Level Percentage of deduplicated Percentage of total 1 78.45221696859151 44.02754081583652 2 12.96519076648315 14.552181893979482 3 3.9118928930612045 6.586086308512582 4 1.623857512490246 3.6452483140860124 5 0.8348068675191281 2.3424764049532065 6 0.4854991595846127 1.6347785868096134 7 0.32852569184769437 1.290584919845699 8 0.22427397372952362 1.0069040150908282 9 0.17503174768609786 0.8840534967369837 >10 0.9044053851833864 9.315830367510653 >50 0.0631896600176727 2.457914063129468 >100 0.027824533130162102 2.5733605504172434 >500 9.661296104907293E-4 0.36045048249641076 >1k 0.001352581454687021 1.6562938236011366 >5k 3.8645184419629176E-4 1.699669332926818 >10k+ 5.796777662944376E-4 5.966626624067391 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGT 21823 2.373509962585922 No Hit ATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATG 17737 1.9291090228834944 No Hit TCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTT 15463 1.6817845645175324 TruSeq Adapter, Index 11 (95% over 23bp) ACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCC 9813 1.0672800835291045 No Hit CTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTTC 5861 0.6374532324023319 RNA PCR Primer, Index 11 (95% over 24bp) CATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTC 4550 0.49486644044200817 TruSeq Adapter, Index 11 (95% over 21bp) CACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCG 2371 0.25787435830505523 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2029 0.220677803880623 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2028 0.22056904202558078 No Hit TTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTA 1675 0.18217610719568433 No Hit TATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTAT 1399 0.15215783520403722 No Hit ACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGT 1222 0.1329069868615679 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 938 0.10201862002958322 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 2.175237100843992E-4 0.0 11 0.0 0.0 0.0 2.175237100843992E-4 0.0 12 0.0 0.0 0.0 2.175237100843992E-4 0.0 13 0.0 0.0 0.0 2.175237100843992E-4 0.0 14 0.0 0.0 0.0 2.175237100843992E-4 0.0 15 0.0 0.0 0.0 2.175237100843992E-4 0.0 16 0.0 0.0 0.0 3.262855651265988E-4 0.0 17 0.0 0.0 0.0 4.350474201687984E-4 0.0 18 0.0 0.0 0.0 4.350474201687984E-4 0.0 19 0.0 0.0 0.0 5.43809275210998E-4 0.0 20 0.0 0.0 0.0 8.700948403375968E-4 0.0 21 0.0 0.0 0.0 0.001087618550421996 0.0 22 0.0 0.0 0.0 0.0011963804054641956 0.0 23 0.0 0.0 0.0 0.0013051422605063951 0.0 24 0.0 0.0 0.0 0.001413904115548595 0.0 25 0.0 0.0 0.0 0.0015226659705907945 0.0 26 0.0 0.0 0.0 0.001631427825632994 0.0 27 0.0 0.0 0.0 0.0020664752458017925 0.0 28 0.0 0.0 0.0 0.007722091707996172 0.0 29 0.0 0.0 0.0 0.019250848342469328 0.0 30 0.0 0.0 0.0 0.03523884103367267 0.0 31 0.0 0.0 0.0 0.07297920473331593 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2655 0.0 33.725048 1 TTATACA 2900 0.0 31.067242 2 TATACAC 2970 0.0 30.771044 3 CGTCTTC 780 0.0 26.326923 37 CCGTCTT 2310 0.0 25.867966 37 GCCGTCT 2365 0.0 25.266384 36 GATTACG 60 1.3369208E-6 24.666666 1 GGTATCA 435 0.0 24.24138 1 GTATCAA 1145 0.0 21.650654 1 ATGCACG 70 5.1000916E-6 21.142857 36 TGCCGTC 2925 0.0 20.42906 35 TCGCCGA 55 5.1420165E-4 20.181818 1 ATGCCGT 3085 0.0 19.36953 34 ATACACA 5015 0.0 18.850449 4 TACACAT 5035 0.0 18.702085 5 TAAGTCG 60 9.234901E-4 18.5 22 TATGCCG 3370 0.0 17.731453 33 GAATAAG 210 0.0 17.619047 1 CTAGGAC 105 4.794674E-7 17.619047 3 TCGATAA 65 0.0015796088 17.076923 18 >>END_MODULE