ERR1630925.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630925.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	974994
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGT	9724	0.9973394708069998	No Hit
ATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATG	8240	0.8451334059491648	No Hit
TCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTT	7057	0.7237993259445699	RNA PCR Primer, Index 41 (95% over 22bp)
ACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCC	4779	0.4901568625037693	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2651	0.2718991091227228	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	2524	0.2588733879387976	No Hit
CTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTTC	2487	0.25507849279072486	RNA PCR Primer, Index 41 (95% over 23bp)
CATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTC	2296	0.23548862864797115	No Hit
CACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCG	1150	0.11794944379144898	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATTACG	65	8.731149E-11	31.307692	1
CTTATAC	1370	0.0	29.437956	1
TTATACA	1425	0.0	28.301754	2
TATACAC	1595	0.0	26.097178	3
GGTATCA	535	0.0	25.934578	1
GTATCAA	1600	0.0	24.281252	1
CCGTCTT	1120	0.0	24.28125	37
GCCGTCT	1125	0.0	24.008888	36
CGTCTTC	425	0.0	21.764706	37
GTACGGT	45	0.0038253977	20.555555	11
CCGGCGT	55	5.142325E-4	20.181818	23
GCAACGC	55	5.142325E-4	20.181818	3
ATTTCGG	65	6.900756E-5	19.923077	29
TGCCGTC	1410	0.0	19.156029	35
CGGTCGT	100	2.8738032E-7	18.5	10
ATGCCGT	1520	0.0	17.891447	34
TACACAT	2430	0.0	17.281893	5
TCGGGAT	75	2.0668609E-4	17.266666	22
AACGGCC	65	0.0015797013	17.076923	37
CTAACCG	65	0.0015797013	17.076923	6