##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630923.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 810271 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.047211365086497 31.0 31.0 34.0 28.0 34.0 2 31.0372023680966 31.0 31.0 34.0 28.0 34.0 3 30.444547564950494 31.0 30.0 34.0 26.0 34.0 4 34.692900276574136 35.0 35.0 37.0 32.0 37.0 5 34.83728777162209 35.0 35.0 37.0 32.0 37.0 6 35.05882106110178 36.0 35.0 37.0 32.0 37.0 7 35.07622141234229 36.0 35.0 37.0 32.0 37.0 8 35.11083945988441 37.0 35.0 37.0 32.0 37.0 9 36.8221644363429 39.0 37.0 39.0 33.0 39.0 10 36.59782838087504 38.0 35.0 39.0 32.0 39.0 11 36.67764982333071 38.0 35.0 39.0 32.0 39.0 12 36.5999005271076 38.0 35.0 39.0 32.0 39.0 13 36.6878933097692 38.0 35.0 39.0 32.0 39.0 14 37.70765953613051 39.0 37.0 40.0 33.0 41.0 15 37.71782403664947 39.0 37.0 40.0 33.0 41.0 16 37.71702553836926 39.0 37.0 40.0 33.0 41.0 17 37.687743977015096 39.0 37.0 40.0 32.0 41.0 18 37.726786470205646 39.0 37.0 40.0 33.0 41.0 19 37.754292082525474 39.0 37.0 40.0 32.0 41.0 20 37.756413594957735 39.0 37.0 40.0 32.0 41.0 21 37.70918248339136 39.0 37.0 40.0 32.0 41.0 22 37.61717376038387 39.0 37.0 40.0 32.0 41.0 23 37.60220963109873 39.0 37.0 40.0 32.0 41.0 24 37.551509309848186 39.0 37.0 40.0 32.0 41.0 25 37.52005193324209 39.0 37.0 40.0 32.0 41.0 26 37.39396202011426 39.0 36.0 40.0 32.0 41.0 27 37.29949239205155 39.0 36.0 40.0 32.0 41.0 28 37.28237959892431 39.0 36.0 40.0 32.0 41.0 29 37.202281705750295 39.0 36.0 40.0 31.0 41.0 30 37.10958185594696 39.0 36.0 40.0 31.0 41.0 31 37.10974106194101 39.0 36.0 40.0 31.0 41.0 32 36.96834022197512 39.0 36.0 40.0 31.0 41.0 33 36.94533557291326 39.0 36.0 40.0 31.0 41.0 34 36.863011264132616 39.0 36.0 40.0 30.0 41.0 35 36.80025324860448 39.0 36.0 40.0 30.0 41.0 36 36.81108912943941 39.0 36.0 40.0 30.0 41.0 37 36.737806240134475 39.0 35.0 40.0 30.0 41.0 38 36.68991732395705 39.0 35.0 40.0 30.0 41.0 39 36.63300673478379 39.0 35.0 40.0 30.0 41.0 40 36.550941598551596 39.0 35.0 40.0 30.0 41.0 41 36.49732373489857 38.0 35.0 40.0 30.0 41.0 42 36.453041019609486 38.0 35.0 40.0 30.0 41.0 43 35.70684005721542 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 7.0 11 9.0 12 16.0 13 9.0 14 4.0 15 6.0 16 12.0 17 14.0 18 34.0 19 50.0 20 139.0 21 262.0 22 519.0 23 932.0 24 1650.0 25 2607.0 26 4090.0 27 6271.0 28 8959.0 29 12588.0 30 17162.0 31 22680.0 32 29381.0 33 38148.0 34 49710.0 35 66497.0 36 92108.0 37 136274.0 38 202318.0 39 117807.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.94088644416498 22.88370187258337 15.634522277114693 23.54088940613696 2 14.46516042163671 23.03476244367625 39.99390327433661 22.506173860350426 3 15.556523681583077 28.636591955037265 34.01911212421523 21.787772239164426 4 12.147664176553278 19.511990432830498 38.1695753642917 30.17077002632453 5 11.975869801584901 39.137646540478435 35.874787571071906 13.011696086864767 6 27.056626733524958 40.74784855930917 17.92622468285302 14.269300024312853 7 24.160311796917327 33.67712777576885 23.119548891667108 19.043011535646713 8 24.567582944471663 35.264127680738916 22.538755552154775 17.62953382263465 9 24.349384341781946 15.309322436567518 19.687117026278862 40.65417619537167 10 14.347422035343731 28.97388651451181 34.177330794265124 22.501360655879328 11 31.003084153326483 23.857943823733045 25.138626459542547 20.000345563397925 12 20.413540654916687 27.033301204165028 29.97256473451475 22.580593406403537 13 28.69706554967412 21.49663507641271 26.98171352547481 22.82458584843836 14 21.619063251677524 22.555540060053982 27.379111433088436 28.446285255180058 15 23.51941510926591 29.292545333598262 23.496583241903018 23.691456315232806 16 23.597907366794566 28.223150032519982 24.108353871729335 24.070588728956118 17 20.835374831383575 30.516580255247938 25.618219089662592 23.029825823705895 18 22.992677758428968 27.175352443812006 26.447200998184556 23.384768799574463 19 23.63394469257816 28.391982435506147 26.72587319551113 21.24819967640456 20 22.921590430855847 26.189386020232735 26.852991159747784 24.036032389163626 21 23.90410122045587 26.73562301995258 26.931360001777183 22.42891575781436 22 22.017078236787448 29.933812267747456 26.421036912341673 21.628072583123426 23 22.670686720862527 27.372693827126977 27.142647336508404 22.8139721155021 24 23.51867461627036 28.57167540242709 26.364265782682583 21.545384198619967 25 21.85108439028424 27.752443318346575 26.56790135645975 23.828570934909433 26 23.96099576561422 28.196739115678582 26.993437997904408 20.84882712080279 27 22.091621198339816 28.87552436160248 26.011420870301414 23.02143356975629 28 21.3015151720844 27.3675103761581 28.84590464178034 22.48506980997716 29 23.55076264607767 27.89881410046762 26.501997479855504 22.048425773599202 30 21.164153721409257 28.07603875740339 27.67111250433497 23.088695016852387 31 24.237199652955617 26.16211119489652 27.719121133546675 21.881568018601183 32 23.017484273780006 27.03490560565539 27.18966864172604 22.75794147883856 33 22.54776488360067 27.552633625046436 28.598456565766266 21.301144925586623 34 22.917517719380307 27.85660599972108 26.989982363925158 22.235893916973456 35 21.512308844818588 26.40807828491949 29.89900909695645 22.180603773305474 36 23.962846998103103 26.463121597588955 26.302928279550912 23.271103124757026 37 22.389669629050037 27.152397160949853 28.154654430431304 22.30327877956881 38 22.206274197151323 25.98698460144816 28.418516767846807 23.388224433553713 39 23.56730032297836 26.593571780305602 27.03502902115465 22.804098875561387 40 21.082699491898392 26.22135063454079 30.74823114735687 21.94771872620395 41 22.217011345586847 26.75351826734512 27.026883598203565 24.002586788864466 42 22.475196570036445 25.781497795182105 29.268355895743525 22.47494973903793 43 22.612928267209366 25.223906569530442 29.34771206176699 22.815453101493205 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 18.0 1 17.5 2 17.0 3 84.0 4 151.0 5 151.0 6 202.0 7 253.0 8 278.0 9 303.0 10 453.0 11 603.0 12 603.0 13 931.0 14 1259.0 15 2988.0 16 4717.0 17 5190.0 18 5663.0 19 5663.0 20 6134.0 21 6605.0 22 8261.0 23 9917.0 24 12562.5 25 15208.0 26 15208.0 27 19082.0 28 22956.0 29 27326.0 30 31696.0 31 35486.0 32 39276.0 33 39276.0 34 42491.5 35 45707.0 36 48128.0 37 50549.0 38 53432.5 39 56316.0 40 56316.0 41 56319.5 42 56323.0 43 55561.0 44 54799.0 45 54637.0 46 54475.0 47 54475.0 48 53236.0 49 51997.0 50 52991.0 51 53985.0 52 63174.5 53 72364.0 54 72364.0 55 58232.5 56 44101.0 57 46549.0 58 48997.0 59 40327.0 60 31657.0 61 31657.0 62 25213.5 63 18770.0 64 15547.0 65 12324.0 66 10135.5 67 7947.0 68 7947.0 69 6252.0 70 4557.0 71 3872.5 72 3188.0 73 2546.0 74 1904.0 75 1904.0 76 1394.0 77 884.0 78 677.5 79 471.0 80 324.0 81 177.0 82 177.0 83 122.0 84 67.0 85 58.5 86 50.0 87 33.5 88 17.0 89 17.0 90 10.0 91 3.0 92 1.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 810271.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.574724285718226 #Duplication Level Percentage of deduplicated Percentage of total 1 80.23679091541032 42.98663950863929 2 11.765399699711654 12.606560900466476 3 3.3563574715700493 5.394477784310272 4 1.3651502979293184 2.9255020328051726 5 0.7130784069355438 1.9101489522835469 6 0.46009393860012526 1.4789643543619129 7 0.3147677373255457 1.180451631887884 8 0.23175968879196648 0.9933169142058771 9 0.17975996446362108 0.8667531480374104 >10 1.1833303949404657 12.39472923880082 >50 0.12224246597789849 4.4881067444505724 >100 0.06688678097053452 6.0305602473994115 >500 0.0020757966503962013 0.8088690962736635 >1k 0.0013838644335974675 1.6672885297923226 >5k 6.919322167987337E-4 2.953373093497836 >10k+ 2.3064407226624457E-4 1.3142578227874557 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATG 10636 1.3126472501175532 No Hit CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGT 9943 1.2271203091311425 No Hit TCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT 7971 0.9837449445926115 TruSeq Adapter, Index 5 (95% over 21bp) ACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCC 5987 0.738888594062974 No Hit CATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTC 2859 0.35284491238116633 No Hit CTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTTC 2712 0.33470283399010947 Illumina Paired End PCR Primer 2 (95% over 23bp) TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2632 0.3248295940493983 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2534 0.3127348751220271 No Hit CACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCG 1415 0.17463293145132924 No Hit GTTTTATTGTCTCTGCCTGGACTTCTAACATAGCATATGAGGT 1341 0.16550018450617138 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 906 0.11181444232855427 No Hit GGGATATACAAAGTGGAAATAGACACCAAATCTTACTGGAAGG 900 0.11107394933300094 No Hit TTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTA 853 0.10527342086783312 No Hit TATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTAT 814 0.1004602163967364 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.2341549925888994E-4 0.0 6 0.0 0.0 0.0 1.2341549925888994E-4 0.0 7 0.0 0.0 0.0 1.2341549925888994E-4 0.0 8 0.0 0.0 0.0 1.2341549925888994E-4 0.0 9 0.0 0.0 0.0 1.2341549925888994E-4 0.0 10 0.0 0.0 0.0 2.468309985177799E-4 0.0 11 0.0 0.0 0.0 2.468309985177799E-4 0.0 12 0.0 0.0 0.0 2.468309985177799E-4 0.0 13 0.0 0.0 0.0 2.468309985177799E-4 0.0 14 0.0 0.0 0.0 2.468309985177799E-4 0.0 15 0.0 0.0 0.0 2.468309985177799E-4 0.0 16 0.0 0.0 0.0 2.468309985177799E-4 0.0 17 0.0 0.0 0.0 2.468309985177799E-4 0.0 18 0.0 0.0 0.0 3.702464977766698E-4 0.0 19 0.0 0.0 0.0 3.702464977766698E-4 0.0 20 0.0 0.0 0.0 3.702464977766698E-4 0.0 21 0.0 0.0 0.0 7.404929955533396E-4 0.0 22 0.0 0.0 0.0 0.0014809859911066791 0.0 23 0.0 0.0 0.0 0.001604401490365569 0.0 24 0.0 0.0 0.0 0.001851232488883349 0.0 25 0.0 0.0 0.0 0.001974647988142239 0.0 26 0.0 0.0 0.0 0.002098063487401129 0.0 27 0.0 0.0 0.0 0.003332218479990028 0.0 28 0.0 0.0 0.0 0.008145422951086735 0.0 29 0.0 0.0 0.0 0.01826549389031571 0.0 30 0.0 0.0 0.0 0.03282852280286472 0.0 31 0.0 0.0 0.0 0.07725810253606509 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 20 0.0018416155 37.0 2 GATTACG 65 8.731149E-11 31.307692 1 CTTATAC 1355 0.0 30.719559 1 GGTATCA 390 0.0 28.46154 1 TTATACA 1520 0.0 27.62829 2 TATACAC 1565 0.0 27.424921 3 CGTCTTC 385 0.0 27.38961 37 CCGTCTT 1235 0.0 25.615385 37 GTATCAA 1360 0.0 25.4375 1 GCCGTCT 1280 0.0 24.714844 36 GCAACGC 60 1.3365934E-6 24.666668 3 TCGCCGA 50 2.7011495E-4 22.199999 1 AGCAACG 70 5.0988565E-6 21.142859 2 TTACGGG 90 9.469659E-8 20.555555 3 TGCCGTC 1555 0.0 20.344053 35 ATGCCGT 1635 0.0 19.348625 34 CGGTACT 115 3.0468073E-9 19.304346 4 ATTACGG 110 3.8473445E-8 18.5 2 CGCCGAG 60 9.2336064E-4 18.5 2 TCTATAC 130 6.9485395E-10 18.5 3 >>END_MODULE