##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630921.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 706128 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.540513901162395 31.0 30.0 33.0 27.0 34.0 2 30.512275394829267 31.0 30.0 34.0 27.0 34.0 3 29.90619547730723 31.0 30.0 34.0 25.0 34.0 4 34.20644557360705 35.0 35.0 37.0 30.0 37.0 5 34.12794989010491 35.0 33.0 37.0 30.0 37.0 6 34.40308272721093 35.0 35.0 37.0 30.0 37.0 7 34.460515657217954 35.0 35.0 37.0 30.0 37.0 8 34.502581684906986 35.0 35.0 37.0 30.0 37.0 9 36.14568038655881 37.0 35.0 39.0 32.0 39.0 10 35.83087485555027 37.0 35.0 39.0 30.0 39.0 11 35.978627104434324 37.0 35.0 39.0 31.0 39.0 12 35.86176727165613 37.0 35.0 39.0 30.0 39.0 13 35.99443018829447 37.0 35.0 39.0 31.0 39.0 14 36.850684295198604 38.0 36.0 40.0 31.0 41.0 15 36.84989831871842 38.0 36.0 40.0 31.0 41.0 16 36.86787806176784 38.0 36.0 40.0 31.0 41.0 17 36.80698541907416 38.0 36.0 40.0 31.0 41.0 18 36.90853358031405 38.0 36.0 40.0 31.0 41.0 19 36.9225409557474 39.0 36.0 40.0 31.0 41.0 20 36.93487582987787 39.0 36.0 40.0 31.0 41.0 21 36.88211485736297 38.0 36.0 40.0 31.0 41.0 22 36.700807785557295 38.0 36.0 40.0 31.0 41.0 23 36.748947782838236 38.0 36.0 40.0 31.0 41.0 24 36.675183536129424 38.0 35.0 40.0 31.0 41.0 25 36.63609572202207 38.0 35.0 40.0 30.0 41.0 26 36.488783903201686 38.0 35.0 40.0 30.0 41.0 27 36.354042043368906 38.0 35.0 40.0 30.0 41.0 28 36.36307864863028 38.0 35.0 40.0 30.0 41.0 29 36.25012887181927 38.0 35.0 40.0 30.0 41.0 30 36.17224355924139 38.0 35.0 40.0 30.0 41.0 31 36.14687563727823 38.0 35.0 40.0 30.0 41.0 32 36.01107306324066 38.0 35.0 40.0 30.0 41.0 33 35.953082160741396 38.0 34.0 40.0 30.0 41.0 34 35.8508400743208 38.0 34.0 40.0 29.0 41.0 35 35.811113565812434 38.0 34.0 40.0 29.0 41.0 36 35.80206987968187 38.0 34.0 40.0 29.0 41.0 37 35.71054681304239 38.0 34.0 40.0 29.0 41.0 38 35.66918037522942 38.0 34.0 40.0 28.0 41.0 39 35.5824156526862 38.0 34.0 40.0 28.0 41.0 40 35.460678517209345 38.0 34.0 40.0 27.0 41.0 41 35.40658350893889 38.0 34.0 40.0 27.0 41.0 42 35.3356062923436 38.0 34.0 40.0 27.0 41.0 43 34.527081492307346 37.0 33.0 40.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 14.0 11 10.0 12 8.0 13 11.0 14 5.0 15 11.0 16 20.0 17 30.0 18 41.0 19 77.0 20 239.0 21 403.0 22 703.0 23 1265.0 24 2042.0 25 3472.0 26 5236.0 27 7758.0 28 11124.0 29 15347.0 30 20840.0 31 27186.0 32 35022.0 33 45120.0 34 59005.0 35 77814.0 36 101809.0 37 125057.0 38 122716.0 39 43734.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.2406985702309 24.29474542859085 16.191257109192666 22.273298891985586 2 14.567897038497268 24.136842045634786 39.97079849545692 21.32446242041103 3 16.057003829334057 29.62196655563864 34.40934221557564 19.911687399451658 4 12.18815852083475 20.08970045090975 38.11844311512927 29.603697913126233 5 11.602853873518683 40.015266353975484 35.536191738608295 12.845688033897536 6 26.157014025785692 41.48567965014841 17.82509686629053 14.53220945777536 7 22.954761742913465 34.678840096979584 23.136881698502254 19.229516461604696 8 24.38368114562799 35.61648879523259 22.724491876826864 17.275338182312556 9 24.089116987288424 15.327249450524553 19.933213241791854 40.65042032039517 10 14.012048807015159 29.757919244103054 34.33088618494097 21.899145763940815 11 30.751081956812364 24.065891736342422 25.278419776584414 19.9046065302608 12 19.939869258831262 27.866902317993336 30.007024222237327 22.18620420093807 13 28.97704098973557 21.89263136428523 26.92047334194367 22.209854304035527 14 21.003982280832936 23.40113973670496 27.953147304737954 27.64173067772415 15 23.20485804273446 29.87659461174178 23.901049101579318 23.01749824394444 16 23.023304556680944 28.773820043958036 24.265572247524528 23.937303151836495 17 20.243213694967483 30.80064804114835 26.044711440418734 22.911426823465433 18 22.860727800058914 26.549435796342873 27.277490766546574 23.31234563705164 19 23.43965966510321 28.120963904561215 28.404057054811595 20.035319375523986 20 23.00631047062289 27.71480524777378 26.961117531099177 22.31776675050416 21 24.61437586386604 26.798399157093332 26.837768789794485 21.749456189246143 22 20.578705277230192 31.02355380327646 27.05005324813631 21.347687671357036 23 23.492058097115535 26.58979675073074 27.411602429021364 22.50654272313235 24 22.092453492851156 28.434504792332266 27.94068497496205 21.53235673985453 25 21.54552715654952 28.542983708336166 28.01772483175855 21.893764303355763 26 22.697159721750165 26.860994040740486 28.314838103006824 22.12700813450253 27 20.597115537126413 30.562872453719436 27.349149162758025 21.490862846396123 28 22.49195613259919 26.85306346724673 28.498090997666147 22.156889402487934 29 20.631386944010153 27.053310447964108 28.614075635012348 23.70122697301339 30 22.07602587632837 28.222078716606617 29.15236331090114 20.54953209616387 31 22.76187886615458 26.327521355901478 27.03178460562391 23.878815172320035 32 21.341881358620533 27.212205152606895 29.551157863730086 21.894755625042485 33 21.644942559989126 26.30061405297623 29.70467110778782 22.34977227924682 34 20.62855459633381 28.510694944825865 27.673028119547734 23.187722339292595 35 20.52319126277389 26.691478032311423 32.484053882582195 20.301276822332497 36 21.777213196474293 27.05515147395373 26.62449300976594 24.54314231980604 37 22.041612852060815 27.413301837627174 28.803418077175806 21.7416672331362 38 21.532073505086895 26.505817642127205 29.011029161851674 22.951079690934222 39 23.432862030679992 27.067755421113453 27.550953934697393 21.948428613509165 40 20.69893843609091 26.065529195839847 31.906113339224618 21.32941902884463 41 21.88285976480185 27.41443477669771 27.417691976525504 23.28501348197494 42 21.83499308907167 26.06623728275893 30.274822695035464 21.823946933133936 43 22.20447284345048 25.723098361770102 29.80762694582285 22.264801848956566 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 18.0 1 24.0 2 30.0 3 101.0 4 172.0 5 172.0 6 235.5 7 299.0 8 311.0 9 323.0 10 506.0 11 689.0 12 689.0 13 1058.0 14 1427.0 15 3414.5 16 5402.0 17 5989.0 18 6576.0 19 6576.0 20 6861.5 21 7147.0 22 8753.0 23 10359.0 24 13107.5 25 15856.0 26 15856.0 27 19375.5 28 22895.0 29 27784.5 30 32674.0 31 34943.5 32 37213.0 33 37213.0 34 39386.0 35 41559.0 36 43183.5 37 44808.0 38 46414.0 39 48020.0 40 48020.0 41 49320.5 42 50621.0 43 48500.5 44 46380.0 45 46032.5 46 45685.0 47 45685.0 48 44306.0 49 42927.0 50 43312.0 51 43697.0 52 53245.0 53 62793.0 54 62793.0 55 48631.0 56 34469.0 57 37820.0 58 41171.0 59 33715.0 60 26259.0 61 26259.0 62 20206.5 63 14154.0 64 11625.0 65 9096.0 66 7365.5 67 5635.0 68 5635.0 69 4457.0 70 3279.0 71 2709.5 72 2140.0 73 1677.5 74 1215.0 75 1215.0 76 919.0 77 623.0 78 464.0 79 305.0 80 205.0 81 105.0 82 105.0 83 79.5 84 54.0 85 41.0 86 28.0 87 21.5 88 15.0 89 15.0 90 11.5 91 8.0 92 5.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 706128.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.15554202587126 #Duplication Level Percentage of deduplicated Percentage of total 1 82.48600202957634 47.145321555475526 2 10.880521280498021 12.437641826217826 3 2.840923449549068 4.871235588389547 4 1.124414586791871 2.5706610067954183 5 0.6153406433839896 1.758506400158014 6 0.38129313860659214 1.307580960468326 7 0.2488074220570035 0.9954506147409427 8 0.17928862602801512 0.8197870879763947 9 0.14524079184051458 0.7471184563720216 >10 0.934076316476776 10.421175500335343 >50 0.10799417621814844 4.224111554160767 >100 0.05140215024909833 5.01338716007355 >500 0.0017298800564304509 0.6495905659812286 >1k 0.0019770057787776582 2.2381848463880294 >5k 7.413771670416217E-4 3.209957643507154 >10k+ 2.471257223472073E-4 1.5902892329599159 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATG 11259 1.5944701243967099 No Hit CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGT 9093 1.287726871048875 No Hit TCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTT 7289 1.0322491106428295 TruSeq Adapter, Index 7 (95% over 21bp) ACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCC 6344 0.8984206829356717 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2983 0.4224446559264043 No Hit CATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTC 2930 0.4149389345840981 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2917 0.4130979085944758 No Hit CTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTTC 2260 0.3200552874266422 RNA PCR Primer, Index 7 (95% over 22bp) CACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCG 1658 0.23480162236874902 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1057 0.14968957469467292 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 1025 0.14515781841252579 No Hit TTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTA 1016 0.1438832619581719 No Hit TATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTAT 877 0.12419844560759521 No Hit ACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT 791 0.11201935059932477 No Hit GTTTTATTGTCTCTGCCTGGACTTCTAACATAGCATATGAGGT 708 0.10026510774250562 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 1.4161738381709833E-4 0.0 18 0.0 0.0 0.0 2.8323476763419665E-4 0.0 19 0.0 0.0 0.0 2.8323476763419665E-4 0.0 20 0.0 0.0 0.0 4.2485215145129495E-4 0.0 21 0.0 0.0 0.0 8.497043029025899E-4 0.0 22 0.0 0.0 0.0 0.001416173838170983 0.0 23 0.0 0.0 0.0 0.001841025989622278 0.0 24 0.0 0.0 0.0 0.0024074955248906712 0.0 25 0.0 0.0 0.0 0.0025491129087077697 0.0 26 0.0 0.0 0.0 0.002832347676341966 0.0 27 0.0 0.0 0.0 0.003115582443976163 0.0 28 0.0 0.0 0.0 0.006939251807037817 0.0 29 0.0 0.0 0.0 0.017277320825685994 0.0 30 0.0 0.0 0.0 0.032996850429383905 0.0 31 0.0 0.0 0.0 0.07534044819069631 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1260 0.0 32.007935 1 CGTCTTC 315 0.0 28.190475 37 GATTACG 40 5.936933E-5 27.750002 1 TTATACA 1480 0.0 27.625002 2 GGTATCA 465 0.0 27.451612 1 ACGGGCT 55 6.256014E-7 26.90909 16 TATACAC 1555 0.0 26.649519 3 CCGTCTT 1055 0.0 26.303318 37 GTATCAA 1605 0.0 26.165108 1 GCCGTCT 1070 0.0 25.934578 36 AGCAACG 50 2.7006716E-4 22.2 2 GCAACGC 50 2.7006716E-4 22.2 3 GTCGCCA 155 0.0 21.48387 12 GGGACGA 45 0.0038243677 20.555557 6 TTAACGG 45 0.0038243677 20.555557 35 TCGCCAT 165 0.0 20.18182 13 TTACGGG 55 5.140396E-4 20.181818 3 TGCCGTC 1415 0.0 19.611307 35 ATTACGG 60 9.232009E-4 18.5 2 AGGACCG 50 0.007032259 18.5 5 >>END_MODULE