ERR1630919.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630919.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	629585
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATG	8263	1.312451853204889	No Hit
TCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTT	6064	0.9631741544032975	RNA PCR Primer, Index 47 (95% over 22bp)
CTTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGT	4996	0.7935386008243525	No Hit
ACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCC	4662	0.7404877816339335	No Hit
CATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTC	2105	0.33434722873003647	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2082	0.33069402860614533	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1993	0.3165577324745666	No Hit
CTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTTC	1956	0.31068084531874174	RNA PCR Primer, Index 47 (95% over 23bp)
CACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCG	1213	0.19266659783825854	No Hit
GTTTTATTGTCTCTGCCTGGACTTCTAACATAGCATATGAGGT	842	0.1337388914920146	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	765	0.12150861281637904	No Hit
TTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTA	672	0.10673697753281923	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGATCG	20	0.0018413033	37.0	37
CTTATAC	825	0.0	30.048487	1
GATTACG	25	0.0054944786	29.6	1
GGTATCA	445	0.0	29.516855	1
CGTCTTC	340	0.0	27.205881	37
CCGTCTT	1045	0.0	25.669855	37
GCCGTCT	1065	0.0	25.187794	36
TTATACA	1050	0.0	24.314285	2
TATACAC	1080	0.0	23.981482	3
GATACAC	95	2.8012437E-10	23.368422	3
GTCGCCC	40	0.0019302218	23.125002	37
GTATCAA	1220	0.0	22.745901	1
GCAACGC	50	2.7002214E-4	22.2	3
TCTGACG	45	0.0038239153	20.555555	8
ACCGACC	55	5.139542E-4	20.181818	8
TGCCGTC	1350	0.0	20.007408	35
ATGCCGT	1410	0.0	19.156027	34
CGAGGGT	60	9.230492E-4	18.5	16
TATGCCG	1540	0.0	17.65909	33
GCGAACT	65	0.001578861	17.076923	28