##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630919.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 629585 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.422656194159647 31.0 30.0 33.0 27.0 34.0 2 30.385263308369797 31.0 30.0 33.0 27.0 34.0 3 29.805160542261966 31.0 30.0 34.0 25.0 34.0 4 34.087097055997205 35.0 33.0 37.0 28.0 37.0 5 33.853265246154216 35.0 33.0 37.0 28.0 37.0 6 34.13797978033149 35.0 33.0 37.0 30.0 37.0 7 34.21501306416131 35.0 35.0 37.0 30.0 37.0 8 34.265176266905975 35.0 35.0 37.0 30.0 37.0 9 35.86864363032792 37.0 35.0 39.0 30.0 39.0 10 35.52409920820858 37.0 35.0 39.0 30.0 39.0 11 35.71035046895971 37.0 35.0 39.0 30.0 39.0 12 35.596939253635334 37.0 35.0 39.0 30.0 39.0 13 35.75070244684991 37.0 35.0 39.0 30.0 39.0 14 36.59868961299904 38.0 36.0 40.0 31.0 41.0 15 36.596596170493264 38.0 36.0 40.0 31.0 41.0 16 36.60757483103949 38.0 36.0 40.0 31.0 41.0 17 36.51830332679464 38.0 35.0 40.0 31.0 41.0 18 36.61842483540745 38.0 36.0 40.0 31.0 41.0 19 36.627406942668586 38.0 35.0 40.0 31.0 41.0 20 36.63800439972363 38.0 35.0 40.0 31.0 41.0 21 36.57468014644567 38.0 35.0 40.0 30.0 41.0 22 36.41129474177434 38.0 35.0 40.0 30.0 41.0 23 36.439730933869136 38.0 35.0 40.0 30.0 41.0 24 36.359994281947635 38.0 35.0 40.0 30.0 41.0 25 36.31844151306019 38.0 35.0 40.0 30.0 41.0 26 36.13507151536329 38.0 35.0 40.0 30.0 41.0 27 36.01754647902984 38.0 34.0 40.0 29.0 41.0 28 35.98199448843285 38.0 34.0 40.0 29.0 41.0 29 35.862280708720824 38.0 34.0 40.0 29.0 41.0 30 35.783007854380266 38.0 34.0 40.0 29.0 41.0 31 35.77988039740464 38.0 34.0 40.0 29.0 41.0 32 35.63298204372722 38.0 34.0 40.0 28.0 41.0 33 35.59315580898529 38.0 34.0 40.0 28.0 41.0 34 35.46702192714248 38.0 34.0 40.0 27.0 41.0 35 35.41455244327613 38.0 34.0 40.0 27.0 41.0 36 35.44044569041512 38.0 34.0 40.0 27.0 41.0 37 35.34005575101059 38.0 34.0 40.0 27.0 41.0 38 35.28671108746238 38.0 34.0 40.0 27.0 41.0 39 35.23175742751177 38.0 34.0 40.0 27.0 41.0 40 35.11404655447636 38.0 33.0 40.0 27.0 41.0 41 35.06946004113821 38.0 33.0 40.0 27.0 41.0 42 35.00698873067179 38.0 33.0 40.0 26.0 41.0 43 34.18854483508978 37.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 3.0 11 11.0 12 6.0 13 9.0 14 4.0 15 7.0 16 18.0 17 36.0 18 74.0 19 131.0 20 271.0 21 462.0 22 842.0 23 1431.0 24 2321.0 25 3638.0 26 5632.0 27 8028.0 28 11406.0 29 15694.0 30 20684.0 31 26969.0 32 34278.0 33 43993.0 34 57158.0 35 73124.0 36 92372.0 37 105438.0 38 92384.0 39 33153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.30840950785041 23.674007481118515 15.78928977024548 22.228293240785597 2 15.618701207938562 23.658282837106984 38.79253794165998 21.930478013294472 3 16.989445428337717 29.18493928540229 32.70868905707729 21.116926229182713 4 12.730449423032633 19.553515410945305 38.23455133143261 29.48148383458945 5 12.084150670679893 39.47457452131166 35.472573202982915 12.968701605025531 6 27.280351342551047 40.819587506055576 17.69292470436875 14.207136447024627 7 24.41640128020839 33.88343114909028 23.267231589062636 18.4329359816387 8 24.80030496279295 35.31421491935164 22.336777400986364 17.548702716869048 9 24.660212679781125 15.166022062152052 19.99602913030012 40.17773612776671 10 14.30434333727773 29.14666010149543 34.1979240293209 22.35107253190594 11 31.463424319194388 23.98024095237339 24.598743616826958 19.957591111605264 12 20.660276213696324 27.181714939205985 30.149225283321552 22.008783563776138 13 29.07153124677367 21.699691066337348 26.43916230532811 22.789615381560868 14 21.795150773922504 22.593772087962705 27.474606288269253 28.136470849845534 15 23.413518428806277 29.776122366320674 23.592207565300953 23.2181516395721 16 23.313611347157252 28.415861241929207 24.419260306392307 23.85126710452123 17 20.795126948704304 30.223083459739353 25.962499106554315 23.019290485002024 18 22.843460374691265 27.06243001342154 26.750001985434853 23.344107626452345 19 23.814893938070316 28.53244597631773 27.1073802584242 20.545279827187752 20 23.318376390797113 26.702828053400257 27.550370482143 22.428425073659632 21 24.85446762549934 26.723476575839637 26.29398730910044 22.128068489560583 22 21.532755704154326 29.318360507318314 26.90200687754632 22.246876910981044 23 23.697038525377828 26.657083634457617 27.12151655455578 22.524361285608773 24 21.778155451607013 29.103139369584724 26.657877808397597 22.46082737041067 25 22.40364684673237 28.3021355337246 27.283210368734963 22.01100725080807 26 23.88494007957623 28.4495342169842 26.482841872026814 21.182683831412756 27 21.570081879333213 28.80437113336563 27.595479561933654 22.030067425367502 28 23.728328978612893 26.742536750399072 27.782110437828095 21.74702383315994 29 21.521796103782652 27.66536686865157 26.941397904969143 23.87143912259663 30 22.92827815148074 27.30306471723437 28.721618208820093 21.047038922464797 31 23.847613904397342 26.286680908852656 26.59291438010753 23.272790806642472 32 22.067393600546392 28.494484461986865 27.370251832556363 22.067870104910376 33 23.437820151369554 26.514291160049876 28.7651389407308 21.282749747849774 34 21.884098255199856 28.24130180992241 27.300523360626443 22.574076574251293 35 21.621862020219666 27.518762359331937 30.143348396165727 20.716027224282662 36 23.691638142585987 26.708069601404098 26.488877593970635 23.11141466203928 37 22.279755712096065 26.88389971171486 28.5067147406625 22.329629835526575 38 22.4060293685523 26.0805133540348 28.275927793705378 23.237529483707522 39 23.876521835812483 26.72442958456761 27.294487638682625 22.104560940937283 40 21.180301309592828 26.490783611426576 30.571090480236983 21.757824598743618 41 22.47718735357418 26.88453505086684 27.058300308933664 23.57997728662532 42 22.088836296925756 26.20503982782309 29.42986252849099 22.27626134676017 43 23.007854380266366 25.466299228857103 28.91555548496232 22.610290905914212 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 15.0 1 18.5 2 22.0 3 74.0 4 126.0 5 126.0 6 181.0 7 236.0 8 225.0 9 214.0 10 352.0 11 490.0 12 490.0 13 758.5 14 1027.0 15 2223.5 16 3420.0 17 3944.5 18 4469.0 19 4469.0 20 4757.5 21 5046.0 22 6371.5 23 7697.0 24 9871.5 25 12046.0 26 12046.0 27 14822.5 28 17599.0 29 20672.5 30 23746.0 31 27395.5 32 31045.0 33 31045.0 34 33834.0 35 36623.0 36 38775.0 37 40927.0 38 42763.5 39 44600.0 40 44600.0 41 44748.0 42 44896.0 43 44968.0 44 45040.0 45 44327.5 46 43615.0 47 43615.0 48 42304.5 49 40994.0 50 40976.5 51 40959.0 52 46231.0 53 51503.0 54 51503.0 55 42374.5 56 33246.0 57 35097.0 58 36948.0 59 30616.5 60 24285.0 61 24285.0 62 19291.0 63 14297.0 64 11767.5 65 9238.0 66 7568.0 67 5898.0 68 5898.0 69 4762.5 70 3627.0 71 3096.5 72 2566.0 73 2041.0 74 1516.0 75 1516.0 76 1161.0 77 806.0 78 647.0 79 488.0 80 323.5 81 159.0 82 159.0 83 120.0 84 81.0 85 63.5 86 46.0 87 33.0 88 20.0 89 20.0 90 14.5 91 9.0 92 4.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 629585.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.22586566441106 #Duplication Level Percentage of deduplicated Percentage of total 1 85.68513231452795 54.1751666515563 2 8.902797425748934 11.257741481557336 3 2.2192296313650584 4.209381436535029 4 0.9335425770845655 2.360961502830274 5 0.4600660975710676 1.4544038640889074 6 0.3287368923496201 1.2470804756779827 7 0.21506686767283184 0.9518452219043695 8 0.1555698047839211 0.7868828462965478 9 0.13347374737117265 0.7595093898913771 >10 0.8480466415117763 10.260983615958883 >50 0.08636158271742224 3.792430419992457 >100 0.02819967509544289 2.79477235272532 >500 0.0015106968801073847 0.6423391685588394 >1k 0.0017624796934586156 3.025759746418305 >5k 5.035656267024615E-4 2.2807418260080525 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATG 8263 1.312451853204889 No Hit TCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTT 6064 0.9631741544032975 RNA PCR Primer, Index 47 (95% over 22bp) CTTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGT 4996 0.7935386008243525 No Hit ACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCC 4662 0.7404877816339335 No Hit CATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTC 2105 0.33434722873003647 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2082 0.33069402860614533 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1993 0.3165577324745666 No Hit CTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTTC 1956 0.31068084531874174 RNA PCR Primer, Index 47 (95% over 23bp) CACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCG 1213 0.19266659783825854 No Hit GTTTTATTGTCTCTGCCTGGACTTCTAACATAGCATATGAGGT 842 0.1337388914920146 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 765 0.12150861281637904 No Hit TTATACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTA 672 0.10673697753281923 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 1.5883478799526673E-4 0.0 16 0.0 0.0 0.0 1.5883478799526673E-4 0.0 17 0.0 0.0 0.0 1.5883478799526673E-4 0.0 18 0.0 0.0 0.0 1.5883478799526673E-4 0.0 19 0.0 0.0 0.0 1.5883478799526673E-4 0.0 20 0.0 0.0 0.0 4.7650436398580015E-4 0.0 21 0.0 0.0 0.0 6.353391519810669E-4 0.0 22 0.0 0.0 0.0 7.941739399763337E-4 0.0 23 0.0 0.0 0.0 9.530087279716003E-4 0.0 24 0.0 0.0 0.0 0.0014295130919574006 0.0 25 0.0 0.0 0.0 0.0014295130919574006 0.0 26 0.0 0.0 0.0 0.0014295130919574006 0.0 27 0.0 0.0 0.0 0.001747182667947934 0.0 28 0.0 0.0 0.0 0.0065122263078059356 0.0 29 0.0 0.0 0.0 0.013183287403607137 0.0 30 0.0 0.0 0.0 0.02366638341129474 0.0 31 0.0 0.0 0.0 0.057974697618272356 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGATCG 20 0.0018413033 37.0 37 CTTATAC 825 0.0 30.048487 1 GATTACG 25 0.0054944786 29.6 1 GGTATCA 445 0.0 29.516855 1 CGTCTTC 340 0.0 27.205881 37 CCGTCTT 1045 0.0 25.669855 37 GCCGTCT 1065 0.0 25.187794 36 TTATACA 1050 0.0 24.314285 2 TATACAC 1080 0.0 23.981482 3 GATACAC 95 2.8012437E-10 23.368422 3 GTCGCCC 40 0.0019302218 23.125002 37 GTATCAA 1220 0.0 22.745901 1 GCAACGC 50 2.7002214E-4 22.2 3 TCTGACG 45 0.0038239153 20.555555 8 ACCGACC 55 5.139542E-4 20.181818 8 TGCCGTC 1350 0.0 20.007408 35 ATGCCGT 1410 0.0 19.156027 34 CGAGGGT 60 9.230492E-4 18.5 16 TATGCCG 1540 0.0 17.65909 33 GCGAACT 65 0.001578861 17.076923 28 >>END_MODULE