##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630918.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 218080 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.104140682318416 31.0 30.0 31.0 26.0 34.0 2 30.092154255319148 31.0 30.0 33.0 26.0 34.0 3 29.537853081438005 31.0 30.0 33.0 25.0 34.0 4 33.68622982391783 35.0 33.0 37.0 28.0 37.0 5 33.34175990462216 35.0 33.0 37.0 28.0 37.0 6 33.666773661041816 35.0 33.0 37.0 28.0 37.0 7 33.730741012472485 35.0 33.0 37.0 29.0 37.0 8 33.82296404988995 35.0 33.0 37.0 29.0 37.0 9 35.395276962582535 37.0 34.0 39.0 30.0 39.0 10 35.05702494497432 37.0 34.0 39.0 29.0 39.0 11 35.23843085106383 37.0 34.0 39.0 30.0 39.0 12 35.06733767424798 37.0 34.0 39.0 29.0 39.0 13 35.29267699926633 37.0 34.0 39.0 30.0 39.0 14 35.864925715333825 38.0 34.0 40.0 29.0 41.0 15 35.87361060161409 38.0 34.0 40.0 29.0 41.0 16 35.89380961115187 38.0 34.0 40.0 29.0 41.0 17 35.77897101980924 38.0 34.0 40.0 29.0 41.0 18 36.01253668378577 38.0 34.0 40.0 29.0 41.0 19 35.91432043286867 38.0 34.0 40.0 29.0 41.0 20 35.906570983125455 38.0 34.0 40.0 29.0 41.0 21 35.89299339691856 38.0 34.0 40.0 29.0 41.0 22 35.544639581804844 38.0 34.0 40.0 27.0 41.0 23 35.67495414526779 38.0 34.0 40.0 28.0 41.0 24 35.39809244314013 38.0 34.0 40.0 27.0 41.0 25 35.394763389581804 38.0 34.0 40.0 27.0 41.0 26 35.172569699192955 38.0 33.0 40.0 27.0 41.0 27 34.875252201027145 37.0 33.0 40.0 26.0 41.0 28 34.983373074101245 37.0 33.0 40.0 26.0 41.0 29 34.782162509170945 37.0 33.0 39.0 26.0 41.0 30 34.688843543653704 37.0 33.0 39.0 25.0 40.0 31 34.636862619222306 37.0 33.0 39.0 25.0 40.0 32 34.335280630961115 37.0 33.0 39.0 25.0 40.0 33 34.22249633162142 37.0 33.0 39.0 24.0 40.0 34 34.07708180484226 37.0 32.0 39.0 24.0 40.0 35 34.017644900953776 37.0 32.0 39.0 24.0 40.0 36 34.05855190755686 37.0 32.0 39.0 24.0 40.0 37 33.95017883345561 37.0 32.0 39.0 24.0 40.0 38 33.81540719002201 37.0 32.0 39.0 23.0 40.0 39 33.67471570066031 36.0 31.0 39.0 23.0 40.0 40 33.280465884079234 36.0 31.0 39.0 22.0 40.0 41 33.294268158473955 36.0 31.0 39.0 22.0 40.0 42 33.121139031548054 36.0 31.0 39.0 21.0 40.0 43 32.150559427732944 35.0 29.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 15.0 10 16.0 11 17.0 12 9.0 13 14.0 14 16.0 15 10.0 16 26.0 17 23.0 18 66.0 19 137.0 20 218.0 21 389.0 22 608.0 23 1067.0 24 1618.0 25 2403.0 26 3372.0 27 4717.0 28 6252.0 29 8141.0 30 10381.0 31 12727.0 32 15556.0 33 18223.0 34 21503.0 35 24163.0 36 25754.0 37 25122.0 38 23613.0 39 11900.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.72230374174615 26.73055759354365 18.923330887747618 22.623807776962582 2 14.11775495231108 22.332171680117387 39.11546221570066 24.43461115187087 3 15.206346294937637 32.41287600880411 33.84675348495965 18.534024211298604 4 10.312270726338959 18.73119955979457 30.187545854732207 40.76898385913426 5 12.072175348495964 40.38609684519442 30.178374908290532 17.363352898019073 6 25.919387380777696 36.50953778429934 16.401779163609685 21.16929567131328 7 21.441214233308877 36.45772193690389 18.20157740278797 23.899486426999268 8 27.530722670579603 28.307043286867206 25.35812545854732 18.804108584005867 9 20.536500366837856 12.716892883345562 15.787784299339691 50.958822450476895 10 15.194424064563464 24.866104181951577 31.256878209831257 28.682593543653706 11 29.435069699192955 20.738719735876742 21.062454145267793 28.763756419662514 12 17.88930667644901 30.252201027146004 22.21891049156273 29.63958180484226 13 35.371881878209834 16.68745414526779 21.998807776962582 25.941856199559794 14 23.193782098312546 26.15049523110785 22.616471019809246 28.039251650770357 15 27.869589141599416 28.112619222303742 18.942131327953042 25.0756603081438 16 26.986885546588407 23.764214966984593 19.391049156272928 29.857850330154072 17 18.360234776228907 33.378576669112256 20.354457079970654 27.90673147468819 18 22.9736793837124 19.19341526045488 24.29200293470286 33.54090242112986 19 23.449192956713134 29.03750917094644 27.99156272927366 19.521735143066763 20 21.68103448275862 27.859042553191486 22.877842993396918 27.582079970652973 21 35.34299339691856 20.563096111518707 24.28191489361702 19.81199559794571 22 23.163517975055026 33.6546221570066 23.106658107116655 20.075201760821717 23 26.20185253118122 21.939655172413794 24.003118121790166 27.855374174614823 24 21.969002201027145 32.95854732208364 27.898019075568598 17.174431401320618 25 21.37472487160675 26.629218635363173 28.312545854732207 23.68351063829787 26 29.593727072633897 24.117296404988995 29.33235509904622 16.956621423330887 27 20.6754402054292 34.260821716801175 27.082721936903887 17.981016140865737 28 24.955979457079973 20.46038151137197 30.00641966250917 24.577219369038886 29 24.732208363903155 25.230649303008068 28.455612619222304 21.58152971386647 30 19.045763022743948 22.291819515774026 33.62206529713866 25.04035216434336 31 27.77787967718269 25.662600880410857 22.955337490829052 23.604181951577402 32 24.673055759354366 23.014948642699924 33.93112619222304 18.38086940572267 33 23.48312545854732 21.69249816581071 32.74532281731475 22.079053558327217 34 18.83207997065297 33.21946074834923 26.815847395451208 21.132611885546588 35 20.06052824651504 19.894534115920763 42.844369038884814 17.200568598679382 36 26.69203961848863 21.72230374174615 23.071349963316216 28.51430667644901 37 21.168378576669113 22.385821716801175 31.71588407923698 24.729915627292737 38 20.946900220102716 20.012380777696258 28.989820249449743 30.05089875275128 39 29.229640498899485 22.124908290535583 26.42149669845928 22.22395451210565 40 18.139214966984593 19.56804842259721 40.62270726338958 21.670029347028613 41 23.90728173147469 24.67993396918562 24.52494497432135 26.88783932501834 42 19.784024211298608 20.169203961848865 38.16351797505503 21.883253851797505 43 24.83079603815114 19.41168378576669 31.10097212032282 24.65654805575935 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 8.0 1 7.5 2 7.0 3 49.0 4 91.0 5 91.0 6 138.5 7 186.0 8 197.5 9 209.0 10 326.0 11 443.0 12 443.0 13 694.0 14 945.0 15 2276.0 16 3607.0 17 3517.0 18 3427.0 19 3427.0 20 2868.0 21 2309.0 22 1892.5 23 1476.0 24 1524.0 25 1572.0 26 1572.0 27 1817.5 28 2063.0 29 2520.5 30 2978.0 31 3549.5 32 4121.0 33 4121.0 34 5131.5 35 6142.0 36 6828.0 37 7514.0 38 8530.0 39 9546.0 40 9546.0 41 10335.0 42 11124.0 43 11964.0 44 12804.0 45 13515.0 46 14226.0 47 14226.0 48 16226.0 49 18226.0 50 26138.5 51 34051.0 52 24390.0 53 14729.0 54 14729.0 55 23496.5 56 32264.0 57 25768.5 58 19273.0 59 12615.5 60 5958.0 61 5958.0 62 4978.0 63 3998.0 64 3034.0 65 2070.0 66 1691.5 67 1313.0 68 1313.0 69 1027.5 70 742.0 71 531.0 72 320.0 73 248.0 74 176.0 75 176.0 76 128.5 77 81.0 78 59.0 79 37.0 80 28.5 81 20.0 82 20.0 83 14.0 84 8.0 85 8.5 86 9.0 87 7.0 88 5.0 89 5.0 90 3.5 91 2.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 218080.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.22835656639765 #Duplication Level Percentage of deduplicated Percentage of total 1 80.23976258037644 28.267149669845924 2 8.446359305443469 5.951027146001468 3 3.17991305026944 3.3606933235509904 4 1.8379194543513915 2.589875275128393 5 1.1532554083253064 2.031364636830521 6 0.7927003878895165 1.675531914893617 7 0.5883424882201338 1.450843727072634 8 0.4607815062609013 1.298606016140866 9 0.3878895165699112 1.22982391782832 >10 2.615000130164267 17.368396918561995 >50 0.21216775570770313 5.018800440205429 >100 0.06768541899877645 4.156272927366104 >500 0.0039049280191601806 1.0890498899486427 >1k 0.009111498711373754 7.529347028613353 >5k 0.0026032853461067868 5.756144534115921 >10k+ 0.0026032853461067868 11.227072633895819 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATG 13220 6.0619955979457085 No Hit TCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTT 11264 5.16507703595011 TruSeq Adapter, Index 1 (95% over 21bp) ACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCC 7325 3.358859134262656 No Hit CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGT 5228 2.397285399853265 No Hit CTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTTC 4404 2.019442406456346 RNA PCR Primer, Index 1 (95% over 22bp) CATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTC 3788 1.7369772560528247 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2422 1.1106016140865738 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2051 0.9404805575935437 No Hit CACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCG 1620 0.7428466617754952 No Hit TTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTA 1087 0.4984409391049156 No Hit TATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTAT 1048 0.4805575935436537 No Hit ACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT 952 0.43653705062362436 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 907 0.4159024211298606 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 516 0.23661041819515774 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 422 0.19350696991929567 No Hit ATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCT 399 0.18296038151137198 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 377 0.1728723404255319 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 316 0.14490095377842993 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 314 0.14398385913426265 No Hit CTTTACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTA 294 0.13481291269258988 No Hit GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT 269 0.1233492296404989 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 256 0.11738811445341159 No Hit GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 255 0.11692956713132796 No Hit TCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC 245 0.11234409391049156 No Hit CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG 245 0.11234409391049156 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 237 0.10867571533382245 No Hit GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC 219 0.10042186353631695 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 9.17094644167278E-4 0.0 23 0.0 0.0 0.0 0.001834189288334556 0.0 24 0.0 0.0 0.0 0.003209831254585473 0.0 25 0.0 0.0 0.0 0.003668378576669112 0.0 26 0.0 0.0 0.0 0.0045854732208363905 0.0 27 0.0 0.0 0.0 0.005502567865003668 0.0 28 0.0 0.0 0.0 0.011005135730007337 0.0 29 0.0 0.0 0.0 0.022010271460014674 0.0 30 0.0 0.0 0.0 0.03347395451210565 0.0 31 0.0 0.0 0.0 0.06006969919295671 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTATA 20 0.0018386673 37.0 4 CGCCGAG 25 1.2303477E-4 36.999996 2 CTTATAC 675 0.0 35.081482 1 CGTCTTC 470 0.0 32.276596 37 AGCAACG 35 2.3795064E-5 31.714287 2 GCAACGC 35 2.3795064E-5 31.714287 3 TAGGACC 35 2.3795064E-5 31.714287 4 GGTATCA 260 0.0 31.307692 1 TCGCCGA 30 3.5900046E-4 30.833332 1 AGGGATC 30 3.5900046E-4 30.833332 36 TTATACA 765 0.0 30.470589 2 GACAGAC 25 0.0054867025 29.599998 16 CGCCTGT 25 0.0054867025 29.599998 1 ACGTCGC 25 0.0054867025 29.599998 16 AAAGGCT 25 0.0054867025 29.599998 5 CAAAGGC 25 0.0054867025 29.599998 4 TAGCAAC 40 5.9184153E-5 27.750002 1 CCGTCTT 1760 0.0 27.014204 37 TATACAC 895 0.0 26.87151 3 CTAATCC 35 8.846268E-4 26.428572 3 >>END_MODULE