##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630910.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 313164 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.504674866842933 31.0 30.0 33.0 27.0 34.0 2 30.510607860418183 31.0 30.0 34.0 27.0 34.0 3 29.917027499968068 31.0 30.0 34.0 25.0 34.0 4 34.15361280351509 35.0 35.0 37.0 30.0 37.0 5 34.095145035827876 35.0 33.0 37.0 30.0 37.0 6 34.38236515052816 35.0 35.0 37.0 30.0 37.0 7 34.412617669974836 35.0 35.0 37.0 30.0 37.0 8 34.46672350589468 35.0 35.0 37.0 30.0 37.0 9 36.14738603415463 37.0 35.0 39.0 32.0 39.0 10 35.860925904637824 37.0 35.0 39.0 30.0 39.0 11 35.94625180416651 37.0 35.0 39.0 31.0 39.0 12 35.817817501373085 37.0 35.0 39.0 30.0 39.0 13 36.00863764672823 37.0 35.0 39.0 31.0 39.0 14 36.728541594819326 38.0 36.0 40.0 31.0 41.0 15 36.737667803451224 38.0 36.0 40.0 31.0 41.0 16 36.73513877712636 38.0 36.0 40.0 31.0 41.0 17 36.605609201568505 38.0 36.0 40.0 31.0 41.0 18 36.785055114891875 38.0 36.0 40.0 31.0 41.0 19 36.730786425004155 38.0 36.0 40.0 31.0 41.0 20 36.690082512677066 38.0 36.0 40.0 31.0 41.0 21 36.54236438415654 38.0 35.0 40.0 30.0 41.0 22 36.2857161104086 38.0 35.0 40.0 30.0 41.0 23 36.415858783257335 38.0 35.0 40.0 30.0 41.0 24 36.28275280683604 38.0 35.0 40.0 30.0 41.0 25 36.237214366913186 38.0 35.0 40.0 30.0 41.0 26 36.05975463335505 38.0 35.0 40.0 30.0 41.0 27 35.81983561328888 38.0 34.0 40.0 29.0 41.0 28 35.83123219782606 38.0 34.0 40.0 29.0 41.0 29 35.68189510927182 38.0 34.0 40.0 29.0 41.0 30 35.582477551698155 38.0 34.0 40.0 28.0 41.0 31 35.577473783704384 38.0 34.0 40.0 28.0 41.0 32 35.31523738360731 38.0 34.0 40.0 27.0 41.0 33 35.31571955908087 38.0 34.0 40.0 27.0 41.0 34 35.317993128201195 38.0 34.0 40.0 27.0 41.0 35 35.33094480847096 38.0 34.0 40.0 27.0 41.0 36 35.35993281475521 38.0 34.0 40.0 27.0 41.0 37 35.292447407748014 38.0 34.0 40.0 27.0 41.0 38 35.17078272087468 38.0 33.0 40.0 27.0 41.0 39 35.010809032966755 38.0 33.0 40.0 26.0 41.0 40 34.70685966458469 37.0 33.0 40.0 26.0 40.0 41 34.701661110472465 37.0 33.0 40.0 26.0 40.0 42 34.585479173851404 37.0 33.0 40.0 25.0 41.0 43 33.613716774597336 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 10.0 10 13.0 11 26.0 12 20.0 13 6.0 14 21.0 15 13.0 16 10.0 17 26.0 18 26.0 19 60.0 20 119.0 21 220.0 22 411.0 23 758.0 24 1216.0 25 1922.0 26 2948.0 27 4361.0 28 6038.0 29 8195.0 30 10598.0 31 13472.0 32 17063.0 33 21762.0 34 27232.0 35 35254.0 36 44568.0 37 51477.0 38 48007.0 39 17311.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.5561047885453 25.416714564892516 17.39344241355967 24.633738233002518 2 14.070263504106476 21.050631617938205 40.84249786054591 24.03660701740941 3 14.378089435567306 31.90117638042687 33.76920718856574 19.951526995440087 4 10.469913527736265 19.920552809390607 32.26903475495268 37.34049890792045 5 12.346246695022417 38.929762041613984 32.92013130500313 15.803859958360475 6 26.040349465455797 38.349554865821105 16.53287095579313 19.077224712929965 7 22.698330587168382 34.392522767623355 19.773664916784817 23.135481728423446 8 26.014803745002617 30.575672810412435 24.472800194147474 18.93672325043747 9 21.020615396405717 13.034065218224317 16.525207239657178 49.42011214571279 10 15.211837886858003 25.62491218658594 31.619215490924883 27.544034435631172 11 29.4794420814653 21.78283583042751 22.753892529154054 25.983829558953136 12 18.346936429474653 28.58693847313229 23.12909529831015 29.93702979908291 13 33.620403366925956 16.968425489519866 23.785620313956905 25.62555082959727 14 23.12302818970252 24.761786156774086 22.246171335147082 29.869014318376312 15 27.6733596454254 27.353399496749308 18.92395039021088 26.049290467614412 16 27.509867034525044 23.723991263363605 20.058499699837785 28.70764200227357 17 19.26051525718154 33.11108556539066 20.32704908610185 27.30135009132595 18 26.085373797754528 20.412946571125673 21.90769053914243 31.593989091977363 19 29.654110945063927 26.550944553013757 22.07182179305412 21.723122708868196 20 24.810642347140796 24.4019108198899 22.336219999744543 28.451226833224762 21 29.88466107215389 25.884520570691393 22.11333358879054 22.11748476836418 22 24.540496353348406 32.27127000549233 22.22477679426754 20.963456846891724 23 25.326027257283723 22.123232555466146 24.608192512549333 27.942547674700798 24 26.27249620007408 29.18375036721973 25.772438722203063 18.771314710503123 25 22.439680167579926 29.983970060415626 22.599660241917974 24.97668953008647 26 27.92881684995721 26.27377348609674 23.453845269571218 22.34356439437483 27 26.391922443192705 29.873804140961287 24.309307583247115 19.424965832598893 28 18.660829469543113 26.26834502050044 28.0476044500645 27.023221059891945 29 29.103600669297876 22.642768645182716 26.228429832292342 22.025200853227066 30 22.494603466554267 24.1327227906145 27.519446679694987 25.85322706313625 31 22.430100522409983 23.75975527199806 27.394911292485723 26.41523291310623 32 25.204365763625447 28.539678890293903 26.577767559489594 19.67818778659105 33 17.933415079638785 22.584332809646064 30.52234611896642 28.95990599174873 34 19.343219527148715 29.805469338749024 28.999501858451165 21.851809275651096 35 19.972602214813964 25.12357742269226 36.157732050938165 18.746088311555607 36 23.98040643241241 22.632550357001442 21.849893346617108 31.537149863969038 37 21.558033490439517 24.028304658262126 29.531172165382998 24.882489685915367 38 21.660535693757904 20.939507733966867 28.654315310827556 28.745641261447673 39 27.866868477858247 22.553677945102248 25.71176763612676 23.867685940912747 40 19.204633993690205 20.740251114432056 38.39649512715383 21.658619764723916 41 23.591792160018393 24.28216525526561 24.247039889642487 27.879002695073506 42 21.564739242058476 21.430624209679277 34.824245443282116 22.18039110498014 43 25.039276545196763 20.196765911790628 30.87264181068067 23.89131573233194 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 3.5 2 7.0 3 28.0 4 49.0 5 49.0 6 73.0 7 97.0 8 121.0 9 145.0 10 221.5 11 298.0 12 298.0 13 492.0 14 686.0 15 1736.5 16 2787.0 17 2848.5 18 2910.0 19 2910.0 20 2426.0 21 1942.0 22 1569.5 23 1197.0 24 1324.0 25 1451.0 26 1451.0 27 1778.0 28 2105.0 29 2957.0 30 3809.0 31 4818.0 32 5827.0 33 5827.0 34 7726.5 35 9626.0 36 10831.5 37 12037.0 38 13855.5 39 15674.0 40 15674.0 41 17117.0 42 18560.0 43 20109.5 44 21659.0 45 23181.0 46 24703.0 47 24703.0 48 25815.5 49 26928.0 50 27157.0 51 27386.0 52 38006.5 53 48627.0 54 48627.0 55 34367.0 56 20107.0 57 27540.0 58 34973.0 59 27342.5 60 19712.0 61 19712.0 62 12412.5 63 5113.0 64 3732.0 65 2351.0 66 1853.5 67 1356.0 68 1356.0 69 986.5 70 617.0 71 458.5 72 300.0 73 186.5 74 73.0 75 73.0 76 52.0 77 31.0 78 20.0 79 9.0 80 7.5 81 6.0 82 6.0 83 5.0 84 4.0 85 2.5 86 1.0 87 1.0 88 1.0 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 313164.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.659897050746572 #Duplication Level Percentage of deduplicated Percentage of total 1 69.99307101472778 15.160427124445977 2 10.32713655997995 4.473694294363336 3 4.5672332709233245 2.9677740736483122 4 2.8069761613421593 2.431952587142839 5 1.8221757013754774 1.9734069050082386 6 1.3297754713921364 1.7281679886577002 7 1.1012663826274123 1.6697321531210483 8 0.8078901976972181 1.3999054808343232 9 0.6471967094691218 1.2616392688814806 >10 5.649334375138211 24.83044028049201 >50 0.6442482050979641 9.621156965679324 >100 0.2786336630744055 10.21956546729509 >500 0.00884551311347319 1.4120396980495842 >1k 0.00884551311347319 3.9538388831411018 >5k 0.00294850437115773 4.44176214379686 >10k+ 0.004422756556736595 12.454496685442772 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATG 15538 4.961617555019095 No Hit TCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTT 12930 4.128827068245392 TruSeq Adapter, Index 11 (95% over 23bp) CTTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGT 10535 3.3640520621782835 No Hit ACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCC 8263 2.638553601307941 No Hit CTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTTC 5647 1.8032085424889197 RNA PCR Primer, Index 11 (95% over 24bp) CATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTC 4102 1.30985681623686 TruSeq Adapter, Index 11 (95% over 21bp) CACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCG 1930 0.6162905059329936 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1873 0.598089180110102 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1787 0.5706275306229325 No Hit TTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTA 1450 0.4630161832139071 No Hit TATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTAT 1240 0.39595866702430677 No Hit ACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGT 945 0.30175882285320155 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 932 0.29760764327955963 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 765 0.24428095183354406 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 661 0.21107151524440868 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 584 0.1864837593082219 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 535 0.17083700553064848 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 496 0.1583834668097227 No Hit GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT 467 0.14912314314544456 No Hit CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG 436 0.1392241764698369 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 423 0.13507299689619498 No Hit ATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCT 412 0.13156046033388258 TruSeq Adapter, Index 11 (95% over 22bp) TCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC 407 0.12996385280555875 No Hit GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 393 0.12549335172625206 No Hit TCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGTCTTCT 344 0.10984659794867864 TruSeq Adapter, Index 11 (96% over 25bp) CTTTACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTA 342 0.10920795493734912 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 9.579645169942905E-4 0.0 22 0.0 0.0 0.0 9.579645169942905E-4 0.0 23 0.0 0.0 0.0 0.001277286022659054 0.0 24 0.0 0.0 0.0 0.0022352505396533444 0.0 25 0.0 0.0 0.0 0.0022352505396533444 0.0 26 0.0 0.0 0.0 0.0022352505396533444 0.0 27 0.0 0.0 0.0 0.002554572045318108 0.0 28 0.0 0.0 0.0 0.007025073124624797 0.0 29 0.0 0.0 0.0 0.0166047182945677 0.0 30 0.0 0.0 0.0 0.0332094365891354 0.0 31 0.0 0.0 0.0 0.07248598178590132 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATACA 50 1.7826096E-10 37.0 2 GCTCTAG 25 1.2315753E-4 37.0 1 CTTATAA 25 1.2315753E-4 37.0 1 ATGAGAG 25 1.2315753E-4 37.0 29 ATAACAC 25 1.2315753E-4 37.0 4 CTTATAC 1315 0.0 34.74905 1 GATACAC 55 4.965841E-10 33.636364 3 CGTCTTC 640 0.0 32.953125 37 CGCCGAG 35 2.3828026E-5 31.714287 2 TTATACA 1435 0.0 31.585365 2 AGAGTAG 30 3.5935524E-4 30.833334 32 TTGTATT 25 0.0054903133 29.6 9 ATATTCC 25 0.0054903133 29.6 6 ATTTCGG 25 0.0054903133 29.6 29 GGTATCA 250 0.0 29.599998 1 TATACAC 1620 0.0 28.435184 3 AGTAGCT 35 8.854932E-4 26.428572 34 TAGGACC 35 8.854932E-4 26.428572 4 CCATTTC 35 8.854932E-4 26.428572 26 CGGATCG 65 9.346331E-8 25.615385 37 >>END_MODULE