##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630902.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 284317 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.05398199896594 31.0 30.0 34.0 28.0 34.0 2 31.036346753799457 31.0 31.0 34.0 28.0 34.0 3 30.435253607768793 31.0 30.0 34.0 26.0 34.0 4 34.65017216698263 35.0 35.0 37.0 32.0 37.0 5 34.88335555031883 35.0 35.0 37.0 32.0 37.0 6 35.12332009693406 36.0 35.0 37.0 32.0 37.0 7 35.11585307948522 36.0 35.0 37.0 32.0 37.0 8 35.14322041946138 37.0 35.0 37.0 32.0 37.0 9 36.91747591596704 39.0 37.0 39.0 33.0 39.0 10 36.740578298167186 39.0 37.0 39.0 32.0 39.0 11 36.79076523739347 39.0 37.0 39.0 32.0 39.0 12 36.67038903758833 38.0 35.0 39.0 32.0 39.0 13 36.77367515836197 39.0 37.0 39.0 32.0 39.0 14 37.52314494033069 39.0 36.0 40.0 32.0 41.0 15 37.503916403169704 39.0 36.0 40.0 32.0 41.0 16 37.54136052364087 39.0 36.0 40.0 32.0 41.0 17 37.546347914475746 39.0 37.0 40.0 32.0 41.0 18 37.76974292778835 39.0 37.0 40.0 33.0 41.0 19 37.63720776457264 39.0 37.0 41.0 32.0 41.0 20 37.48602088513877 39.0 37.0 40.0 32.0 41.0 21 37.52860011888139 39.0 36.0 40.0 32.0 41.0 22 37.299039452442166 39.0 36.0 40.0 32.0 41.0 23 37.39866064990838 39.0 36.0 40.0 32.0 41.0 24 37.281499171699195 39.0 36.0 40.0 32.0 41.0 25 37.069236099142856 39.0 36.0 40.0 31.0 41.0 26 36.95694594413982 39.0 35.0 40.0 31.0 41.0 27 36.608546094676015 38.0 35.0 40.0 30.0 41.0 28 36.74930799072866 39.0 35.0 40.0 31.0 41.0 29 36.7538416626512 39.0 35.0 40.0 31.0 41.0 30 36.213937260170866 38.0 35.0 40.0 30.0 41.0 31 36.25030159997468 38.0 35.0 40.0 30.0 41.0 32 36.072366407917926 38.0 35.0 40.0 30.0 41.0 33 35.861868970198756 38.0 35.0 40.0 30.0 41.0 34 35.79118026709624 38.0 35.0 40.0 29.0 41.0 35 35.72548598923033 38.0 35.0 40.0 29.0 41.0 36 35.55085696599218 38.0 34.0 40.0 28.0 41.0 37 35.461931576374255 38.0 34.0 40.0 27.0 41.0 38 35.339694777308424 38.0 34.0 40.0 27.0 41.0 39 35.08951627936423 38.0 34.0 40.0 26.0 41.0 40 34.712940133723976 38.0 33.0 40.0 24.0 41.0 41 34.59375626501405 38.0 33.0 40.0 24.0 41.0 42 34.37149379038186 37.0 33.0 40.0 23.0 41.0 43 33.35328524147343 36.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 9.0 10 18.0 11 19.0 12 24.0 13 14.0 14 12.0 15 6.0 16 13.0 17 23.0 18 26.0 19 51.0 20 96.0 21 199.0 22 300.0 23 569.0 24 957.0 25 1535.0 26 2407.0 27 3459.0 28 4777.0 29 6389.0 30 7934.0 31 9909.0 32 11966.0 33 15250.0 34 19415.0 35 24830.0 36 33328.0 37 47061.0 38 61140.0 39 32576.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.431518340443944 21.58893066541923 18.2486449983645 23.730905995772325 2 12.815273093061618 22.588167432830257 41.799470309548845 22.797089164559278 3 15.236162452473822 30.65873655110317 35.76993285663538 18.33516813978763 4 9.844645237534161 19.94463925829268 30.401980887530467 39.808734616642695 5 13.729041879310769 37.4697960375215 29.68130642909147 19.11985565407626 6 25.896094851873087 38.41205415082461 15.339919878164162 20.351931119138143 7 22.54666446255412 34.17980634292005 16.596967469409147 26.67656172511668 8 28.419334756627286 28.45309988498753 23.114340683110754 20.01322467527443 9 21.899147782228994 11.226905179781722 15.912871900027081 50.96107513796221 10 15.929754464207205 27.15208728285681 27.261472229940527 29.65668602299546 11 30.60035101664691 20.995227158418245 22.409493628590624 25.99492819634422 12 20.043472602763817 27.74930799072866 22.907880991991334 29.29933841451619 13 35.433688453381265 17.289152600794182 24.297175335980615 22.97998360984394 14 23.729147395336895 24.161411382365458 25.160296429689392 26.949144792608248 15 28.000787852995074 25.62069802368483 20.9938202780699 25.384693845250194 16 27.224189900709415 23.11539584337201 19.934791095854276 29.725623160064295 17 19.116690173292486 32.17289152600794 20.986434156241096 27.723984144458473 18 27.850603375809396 16.85864721420105 24.47127677908813 30.819472630901423 19 29.198746469609627 23.200512104446798 26.189781124589807 21.41096030135377 20 21.23474853772374 20.7395266551068 29.57649384313988 28.44923096402959 21 29.928917370399944 23.39642019295364 25.009408512329546 21.665253924316872 22 23.4572677680195 32.75111934917715 25.846502319593974 17.945110563209376 23 26.053665450887564 24.4396219712504 25.750482735819524 23.756229842042508 24 33.5379171839883 23.12735432633293 25.478251388415046 17.856477101263728 25 23.624686529472385 28.70915210838606 27.491848886981785 20.17431247515977 26 30.24757576929976 28.589567278776855 24.447008093079205 16.715848858844176 27 23.115747563459095 28.688048903160908 31.851419366411438 16.34478416696856 28 17.55505298663112 28.283219082925044 30.05659176201212 24.105136168431716 29 31.01151179845032 20.811980993046493 25.791282265921488 22.385224942581697 30 19.883088243052647 25.35514935793498 36.321078233098966 18.4406841659134 31 27.677557092963134 25.743448334077808 23.835366861636835 22.74362771132222 32 30.958753785387437 21.46407003450374 28.695083304902624 18.882092875206197 33 18.30527193238533 30.45157341980958 32.472908760292206 18.770245887512882 34 22.725338266793756 28.49776833604744 27.167562966688592 21.609330430470212 35 24.265168808055797 21.49572484234147 36.94713998811186 17.29196636149087 36 22.854067818667193 26.146871273965328 25.199689079443015 25.799371827924467 37 21.495373122254385 24.73999092562175 29.593024687232912 24.17161126489095 38 20.717016569533303 19.462079298810835 30.794852224805414 29.02605190685045 39 27.438035713657644 20.0937685752171 27.599123513542985 24.869072197582277 40 18.61795108980469 20.439861140909617 39.42676660206741 21.515421167218282 41 23.26558032055769 22.036670336279577 25.894336251437654 28.803413091725083 42 23.08198243509885 19.584126169029638 35.87333856223863 21.46055283363288 43 23.52901866578502 19.88379168322682 32.90482102723369 23.68236862375447 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 13.0 2 20.0 3 127.0 4 234.0 5 234.0 6 345.0 7 456.0 8 498.5 9 541.0 10 818.0 11 1095.0 12 1095.0 13 1644.0 14 2193.0 15 5285.5 16 8378.0 17 8379.0 18 8380.0 19 8380.0 20 6856.5 21 5333.0 22 4116.5 23 2900.0 24 2824.0 25 2748.0 26 2748.0 27 2683.0 28 2618.0 29 2603.5 30 2589.0 31 2616.0 32 2643.0 33 2643.0 34 3040.5 35 3438.0 36 3445.0 37 3452.0 38 3847.0 39 4242.0 40 4242.0 41 5280.0 42 6318.0 43 8181.0 44 10044.0 45 13389.5 46 16735.0 47 16735.0 48 22003.5 49 27272.0 50 38582.0 51 49892.0 52 38318.5 53 26745.0 54 26745.0 55 34771.5 56 42798.0 57 35621.0 58 28444.0 59 19293.5 60 10143.0 61 10143.0 62 8241.0 63 6339.0 64 4987.0 65 3635.0 66 3026.0 67 2417.0 68 2417.0 69 1862.0 70 1307.0 71 941.5 72 576.0 73 387.0 74 198.0 75 198.0 76 145.5 77 93.0 78 72.0 79 51.0 80 36.0 81 21.0 82 21.0 83 17.5 84 14.0 85 10.0 86 6.0 87 4.0 88 2.0 89 2.0 90 1.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 284317.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.09423284573205 #Duplication Level Percentage of deduplicated Percentage of total 1 76.86996379773444 18.521228065856068 2 10.11327805675581 4.873433526662141 3 3.8289734905990893 2.767685365278896 4 1.941492467593133 1.8711508632969536 5 1.1867920121452762 1.4297421540041573 6 0.8437463505780683 1.2197652620138788 7 0.6393787224103702 1.0783737870053496 8 0.4875627700572229 0.9397960726935076 9 0.36202265561135116 0.7850392343757143 >10 2.9925259838841525 14.611155857722192 >50 0.38829849351862666 6.660875009232653 >100 0.29195375452528316 13.36395642891561 >500 0.030655144225154734 5.0397971278537685 >1k 0.013137918953637744 5.457640591311811 >5k 0.005839075090505665 7.916164000042207 >10k+ 0.004379306317879248 13.464196653735092 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGT 13473 4.738724733308244 No Hit TCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTT 12619 4.438355778936891 TruSeq Adapter, Index 3 (95% over 21bp) ATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATG 12189 4.287116141489957 No Hit ACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCC 6420 2.2580429590914366 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5549 1.9516947632396233 No Hit CTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTTC 5442 1.9140607139214327 RNA PCR Primer, Index 3 (95% over 22bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5096 1.7923655637897133 No Hit CATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTC 3568 1.2549372707224682 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 2206 0.7758945121114812 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2041 0.7178606977423088 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 1510 0.5310973314996993 No Hit CACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCG 1400 0.49240812192025096 No Hit TTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTA 1303 0.4582912734729193 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 1222 0.4298019464189619 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 1202 0.42276754467724403 No Hit TATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTAT 1065 0.3745818927464767 No Hit GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT 936 0.3292100015123964 No Hit CCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCG 914 0.3214721595965067 No Hit GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGAT 883 0.310568836896844 No Hit CTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCC 862 0.30318271506804023 No Hit ACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT 836 0.29403799280380705 No Hit TCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCC 822 0.2891139115846045 No Hit GTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAG 820 0.2884104714104327 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 722 0.25394190287601515 No Hit GAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTGACTG 712 0.2504247020051562 No Hit GTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGG 636 0.2236939753866283 No Hit GCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATACCACGT 628 0.22088021468994115 No Hit GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAG 621 0.2184181740803399 No Hit GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG 616 0.21665957364491042 No Hit GGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATG 575 0.2022390500743888 No Hit GCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCG 573 0.201535609900217 No Hit CGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTG 550 0.19344604789724146 No Hit GGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAG 544 0.1913357273747261 No Hit GAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCG 541 0.1902805671134684 No Hit GCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGG 521 0.18324616537175056 No Hit GTCTGAATATGGGGGGACCATCCTCCAAGGCTAAATACTCCTG 514 0.18078412476214928 No Hit GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC 503 0.17691520380420445 No Hit ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG 484 0.1702325221495725 No Hit AAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGT 473 0.16636360119162766 No Hit GGTGATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAA 466 0.1639015605820264 No Hit GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA 434 0.1526465177952778 No Hit ATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCT 430 0.15123963744693422 No Hit GTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAC 429 0.15088791735984833 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 427 0.15018447718567657 No Hit ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA 411 0.14455695579230224 No Hit GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC 389 0.1368191138764126 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATATTGTGA 389 0.1368191138764126 No Hit TCATTAACCTATGGATTCAGTTAATGATAGTGTGTCGAAACAC 380 0.13365363309263956 No Hit TCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAG 375 0.1318950326572101 No Hit CGTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCT 370 0.13013643222178062 No Hit GATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCC 370 0.13013643222178062 No Hit GAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGGGGGA 362 0.12732267152509347 No Hit ATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAGGATAC 350 0.12310203048006274 No Hit CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGG 348 0.12239859030589097 No Hit GGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCG 345 0.12134343004463327 No Hit GTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTG 342 0.1202882697833756 No Hit AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGA 342 0.1202882697833756 No Hit TAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAA 342 0.1202882697833756 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTC 333 0.11712278899960256 No Hit GTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGG 330 0.11606762873834486 No Hit GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATC 328 0.11536418856417309 No Hit CACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGG 327 0.1150124684770872 No Hit GTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTC 320 0.11255042786748595 No Hit ATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTG 319 0.11219870778040004 No Hit GTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCAGGCA 309 0.1086815069095411 No Hit GTCCCCCCATATTCAGACAGGATACCACGTGTCCCGCCCTACT 305 0.10727462656119754 No Hit GTATGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAG 299 0.10516430603868217 No Hit TCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTTCT 293 0.1030539855161668 TruSeq Adapter, Index 3 (95% over 23bp) TTTGTGTACGGGGCTGTCACCCTGTATCGCGCGCCTTTCCAGA 292 0.10270226542908092 No Hit GATTCAGGCTCTGGGCTGCTCCCCGTTCGCTCGCCGCTACTGG 289 0.10164710516782323 No Hit CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT 288 0.10129538508073734 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 3.5172008708589354E-4 0.0 11 0.0 0.0 0.0 0.0010551602612576807 0.0 12 0.0 0.0 0.0 0.0010551602612576807 0.0 13 0.0 0.0 0.0 0.0010551602612576807 0.0 14 0.0 0.0 0.0 0.0010551602612576807 0.0 15 0.0 0.0 0.0 0.0010551602612576807 0.0 16 0.0 0.0 0.0 0.0014068803483435741 0.0 17 0.0 0.0 0.0 0.0014068803483435741 0.0 18 0.0 0.0 0.0 0.002462040609601255 0.0 19 0.0 0.0 0.0 0.002462040609601255 0.0 20 0.0 0.0 0.0 0.0028137606966871483 0.0 21 0.0 0.0 0.0 0.005275801306288404 0.0 22 0.0 0.0 0.0 0.007737841915889658 0.0 23 0.0 0.0 0.0 0.00984816243840502 0.0 24 0.0 0.0 0.0 0.011255042786748593 0.0 25 0.0 0.0 0.0 0.011255042786748593 0.0 26 0.0 0.0 0.0 0.012661923135092169 0.0 27 0.0 0.0 0.0 0.01582740391886521 0.0 28 0.0 0.0 0.0 0.037282329231104715 0.0 29 0.0 0.0 0.0 0.08652314142312982 0.0 30 0.0 0.0 0.0 0.13435707326681134 0.0 31 0.0 0.0 0.0 0.20681141120650542 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACA 20 0.0018396073 37.0 3 AGCAACG 40 3.816058E-8 37.0 2 AATCCAG 20 0.0018396073 37.0 26 GTCGAAT 20 0.0018396073 37.0 22 TTACTTT 25 1.2312896E-4 37.0 3 TCGAATC 20 0.0018396073 37.0 23 CTTATAC 1560 0.0 34.39102 1 CGTCTTC 540 0.0 34.25926 37 TTACGGG 80 0.0 32.375 3 TTATACA 1730 0.0 30.797688 2 ATTACGG 85 0.0 30.470587 2 GATTACG 85 0.0 30.470587 1 AGCCCCC 25 0.0054894737 29.6 37 CCAGAAT 25 0.0054894737 29.6 29 TCCAGAA 25 0.0054894737 29.6 28 TCAGCCC 25 0.0054894737 29.6 35 AATACAC 25 0.0054894737 29.6 4 TATACAC 1830 0.0 29.31694 3 GACCGTT 40 5.924656E-5 27.75 7 GCAACGC 55 6.233913E-7 26.90909 3 >>END_MODULE