##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630900.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 831475 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4181941730058 31.0 31.0 34.0 28.0 34.0 2 31.420136504404823 31.0 31.0 34.0 28.0 34.0 3 30.89561682552091 31.0 31.0 34.0 27.0 34.0 4 35.05049340028263 37.0 35.0 37.0 32.0 37.0 5 35.2399122042154 37.0 35.0 37.0 33.0 37.0 6 35.43107970774828 37.0 35.0 37.0 33.0 37.0 7 35.435374485101775 37.0 35.0 37.0 33.0 37.0 8 35.46420397486395 37.0 35.0 37.0 33.0 37.0 9 37.22926365795725 39.0 37.0 39.0 34.0 39.0 10 37.06132234883791 39.0 37.0 39.0 33.0 39.0 11 37.11237499624162 39.0 37.0 39.0 33.0 39.0 12 37.05054992633573 39.0 37.0 39.0 33.0 39.0 13 37.134565681469674 39.0 37.0 39.0 33.0 39.0 14 38.24326888962386 40.0 38.0 41.0 33.0 41.0 15 38.25145073513936 40.0 38.0 41.0 33.0 41.0 16 38.246862503382545 40.0 38.0 41.0 33.0 41.0 17 38.206774707597944 40.0 38.0 41.0 33.0 41.0 18 38.267086803571964 40.0 38.0 41.0 33.0 41.0 19 38.26661655491747 40.0 38.0 41.0 34.0 41.0 20 38.26984695871794 40.0 38.0 41.0 34.0 41.0 21 38.23196488168616 40.0 38.0 41.0 34.0 41.0 22 38.152753841065575 40.0 37.0 41.0 33.0 41.0 23 38.1683321807631 40.0 38.0 41.0 33.0 41.0 24 38.09734868757329 40.0 37.0 41.0 33.0 41.0 25 38.066247331549356 40.0 37.0 41.0 33.0 41.0 26 37.948501157581404 40.0 37.0 41.0 33.0 41.0 27 37.87383505216633 40.0 37.0 41.0 33.0 41.0 28 37.88724375357046 40.0 37.0 41.0 33.0 41.0 29 37.79574010042395 40.0 37.0 41.0 33.0 41.0 30 37.70954749090472 40.0 37.0 41.0 33.0 41.0 31 37.696242220150936 40.0 37.0 41.0 33.0 41.0 32 37.582227968369466 40.0 37.0 41.0 32.0 41.0 33 37.55154514567486 39.0 37.0 41.0 32.0 41.0 34 37.47804203373523 39.0 37.0 41.0 32.0 41.0 35 37.45478577227217 39.0 36.0 41.0 32.0 41.0 36 37.43154755103882 39.0 36.0 41.0 32.0 41.0 37 37.3712727382062 39.0 36.0 41.0 32.0 41.0 38 37.34938753420127 39.0 36.0 41.0 32.0 41.0 39 37.25020595928922 39.0 36.0 41.0 31.0 41.0 40 37.14649989476533 39.0 36.0 41.0 31.0 41.0 41 37.094697976487566 39.0 36.0 41.0 31.0 41.0 42 37.02861060164166 39.0 36.0 41.0 31.0 41.0 43 36.35895968008659 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 9.0 10 12.0 11 20.0 12 7.0 13 11.0 14 9.0 15 12.0 16 9.0 17 10.0 18 22.0 19 37.0 20 87.0 21 146.0 22 303.0 23 616.0 24 1163.0 25 1985.0 26 3140.0 27 4843.0 28 7239.0 29 10483.0 30 14122.0 31 18976.0 32 24542.0 33 31962.0 34 42847.0 35 57094.0 36 79316.0 37 116782.0 38 201824.0 39 213845.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.72127845094561 22.279563426440962 15.234492919209838 24.76466520340359 2 13.904687453020234 21.77010733936679 41.01650681018671 23.308698397426262 3 14.532848251601072 28.710544514266818 34.22063200938092 22.535975224751194 4 11.551880693947503 19.512312456778616 37.86175170630506 31.07405514296882 5 12.527135512192189 38.162422201509365 35.70558345109595 13.604858835202501 6 27.57388977419646 40.31137436483358 17.58729967828257 14.527436182687392 7 24.55371478396825 33.020595928921495 22.974954147749482 19.450735139360773 8 24.987401906250938 34.95547069966024 22.21630235424998 17.84082503983884 9 23.770528278060073 14.880303075859166 19.776421419766077 41.57274722631468 10 14.693406296040171 28.573559036651737 33.35061186445774 23.382422802850357 11 31.132625755434617 23.20995820680117 25.503232207823444 20.154183829940767 12 20.401936317989115 26.611503653146517 29.049700832857273 23.936859196007095 13 29.043927959349347 20.510297964460747 26.773985988754923 23.67178808743498 14 21.79211641961574 22.230012928831293 26.49917315613819 29.478697495414774 15 24.072401455245195 28.794130911933614 22.68510779037253 24.44835984244866 16 24.84572596891067 26.947292462190685 23.876244024173907 24.330737544724737 17 20.773324513665475 30.723713881956765 25.09071228840314 23.412249315974623 18 23.698487627409122 26.04059051685258 25.810156649328004 24.450765206410292 19 23.318319853272797 28.941699990979885 25.756637301181634 21.98334285456568 20 22.681379476231996 27.20526774707598 25.665955079828016 24.447397696864005 21 25.168525812562017 26.485462581556874 25.62506389248023 22.720947713400886 22 21.722601401124507 31.325415676959622 25.952313659460597 20.999669262455274 23 25.269310562554498 25.273038876695033 26.02230975074416 23.435340810006313 24 24.320995820680118 28.427673712378603 25.568417571183737 21.68291289575754 25 22.057788869178268 28.68240175591569 25.9496677591028 23.31014161580324 26 24.423103520851498 29.27135512192189 25.69289515619832 20.61264620102829 27 21.159746234102048 31.239063110736943 26.16410595628251 21.4370846988785 28 23.29270272708139 25.914789981659098 27.658919390240232 23.133587901019272 29 22.334405724766228 29.354340178598274 26.142096876033555 22.169157220601942 30 22.83315794221113 27.731441113683513 27.50100724615893 21.93439369794642 31 26.081722240596527 25.755314351002735 25.680748068192067 22.48221534020867 32 22.321416759373403 27.848101265822784 27.091373763492587 22.739108211311223 33 23.12973931868066 27.2498872485643 28.263387353798976 21.356986078956073 34 23.499564027781954 27.745753029255237 26.555097868246193 22.19958507471662 35 21.491445924411437 25.71370155446646 30.039508103069846 22.755344418052257 36 23.164857632520523 27.780270002104697 25.345320063742143 23.70955230163264 37 22.124056646321296 26.657566373011814 27.97642743317598 23.241949547490908 38 22.215340208665324 25.153973360594122 28.391954057548336 24.238732373192217 39 24.01539432935446 25.514176613848882 26.959920622989266 23.510508433807388 40 21.24790282329595 25.01049340028263 31.681890616073844 22.059713160347574 41 22.460687332752034 25.780690940797978 26.452148290688232 25.30647343576175 42 22.713250548723654 25.228659911602875 29.778526113232505 22.279563426440962 43 23.0643134189242 24.59689106707959 29.60906822213536 22.72972729186085 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4.0 1 8.0 2 12.0 3 89.0 4 166.0 5 166.0 6 214.5 7 263.0 8 293.5 9 324.0 10 447.5 11 571.0 12 571.0 13 905.0 14 1239.0 15 2896.0 16 4553.0 17 5077.0 18 5601.0 19 5601.0 20 5701.5 21 5802.0 22 6738.5 23 7675.0 24 9913.0 25 12151.0 26 12151.0 27 15160.5 28 18170.0 29 21664.5 30 25159.0 31 29231.0 32 33303.0 33 33303.0 34 37893.5 35 42484.0 36 45977.0 37 49470.0 38 52526.5 39 55583.0 40 55583.0 41 57752.0 42 59921.0 43 61122.5 44 62324.0 45 62822.5 46 63321.0 47 63321.0 48 63578.5 49 63836.0 50 74529.0 51 85222.0 52 68021.0 53 50820.0 54 50820.0 55 57730.5 56 64641.0 57 53979.0 58 43317.0 59 34069.0 60 24821.0 61 24821.0 62 21699.0 63 18577.0 64 15231.0 65 11885.0 66 9845.0 67 7805.0 68 7805.0 69 6329.0 70 4853.0 71 3949.0 72 3045.0 73 2574.0 74 2103.0 75 2103.0 76 1738.0 77 1373.0 78 996.0 79 619.0 80 450.5 81 282.0 82 282.0 83 193.0 84 104.0 85 75.5 86 47.0 87 33.5 88 20.0 89 20.0 90 13.5 91 7.0 92 4.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 831475.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.238777841087945 #Duplication Level Percentage of deduplicated Percentage of total 1 79.23134886707194 40.59717482649635 2 12.243324062340854 12.546659233334587 3 3.477052271209037 5.344797265989903 4 1.5203519122569782 3.1160389548963408 5 0.7771555702439261 1.9910250805846272 6 0.48665834152110043 1.496146718742718 7 0.34526940481295904 1.2383827629975106 8 0.23709621186462732 0.9718816101356127 9 0.18394323473659976 0.8482523886035752 >10 1.2861705291945582 12.990212682695748 >50 0.14508422714835276 5.062058022296611 >100 0.06160737212441694 5.1445555295994305 >500 0.0018811411332114868 0.5925413731344572 >1k 0.0021162837748629226 2.4025757465787336 >5k 2.3514264165143585E-4 0.7773641601186493 >10k+ 7.054279249543075E-4 4.880333643795104 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGT 16131 1.9400463032562616 No Hit ATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATG 12311 1.4806217865840825 No Hit TCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTT 12064 1.450915541657897 RNA PCR Primer, Index 33 (95% over 22bp) ACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCC 6452 0.7759704140232718 No Hit CTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTTC 4729 0.5687483087284645 RNA PCR Primer, Index 33 (95% over 23bp) CATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTC 3449 0.41480501518386004 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2826 0.33987792777894704 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2758 0.33169969030938995 No Hit CACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCG 1473 0.17715505577437687 No Hit TTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTA 1309 0.1574310712889744 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1273 0.1531014161580324 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1093 0.1314531405033224 No Hit TATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTAT 1031 0.12399651222225563 No Hit ACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGT 838 0.10078474999248323 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 1.2026819808172224E-4 0.0 0.0 0.0 0.0 3 1.2026819808172224E-4 0.0 0.0 0.0 0.0 4 1.2026819808172224E-4 0.0 0.0 0.0 0.0 5 2.4053639616344449E-4 0.0 0.0 0.0 0.0 6 2.4053639616344449E-4 0.0 0.0 0.0 0.0 7 2.4053639616344449E-4 0.0 0.0 0.0 0.0 8 3.6080459424516674E-4 0.0 0.0 0.0 0.0 9 3.6080459424516674E-4 0.0 0.0 1.2026819808172224E-4 0.0 10 7.216091884903335E-4 0.0 0.0 1.2026819808172224E-4 0.0 11 8.418773865720557E-4 0.0 0.0 2.4053639616344449E-4 0.0 12 8.418773865720557E-4 0.0 0.0 2.4053639616344449E-4 0.0 13 8.418773865720557E-4 0.0 0.0 2.4053639616344449E-4 0.0 14 8.418773865720557E-4 0.0 0.0 2.4053639616344449E-4 0.0 15 0.001443218376980667 0.0 0.0 3.6080459424516674E-4 0.0 16 0.001443218376980667 0.0 0.0 3.6080459424516674E-4 0.0 17 0.0016837547731441114 0.0 0.0 6.013409904086113E-4 0.0 18 0.0016837547731441114 0.0 0.0 7.216091884903335E-4 0.0 19 0.0018040229712258337 0.0 0.0 7.216091884903335E-4 0.0 20 0.0022850957635527224 0.0 0.0 7.216091884903335E-4 0.0 21 0.0022850957635527224 0.0 0.0 0.0019242911693075559 0.0 22 0.002405363961634445 0.0 0.0 0.0022850957635527224 0.0 23 0.002405363961634445 0.0 0.0 0.0027661685558796117 0.0 24 0.002405363961634445 0.0 0.0 0.0027661685558796117 0.0 25 0.002405363961634445 0.0 0.0 0.003006704952043056 0.0 26 0.002405363961634445 0.0 0.0 0.0032472413482065006 0.0 27 0.0025256321597161673 0.0 0.0 0.004089118734778556 0.0 28 0.0027661685558796117 0.0 0.0 0.00962145584653778 0.0 29 0.002886436753961334 0.0 0.0 0.025015785200998227 0.0 30 0.002886436753961334 0.0 0.0 0.03980877356505006 0.0 31 0.002886436753961334 0.0 0.0 0.08094049730899906 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1985 0.0 32.992443 1 CGTCTTC 600 0.0 32.066666 37 TTATACA 2175 0.0 30.62069 2 TATACAC 2255 0.0 29.452326 3 GGTATCA 505 0.0 26.009901 1 CCGTCTT 1805 0.0 24.495844 37 GCCGTCT 1835 0.0 23.99455 36 CCGTCCG 40 0.0019307402 23.125 9 CCGTTTA 40 0.0019307402 23.125 27 GTATCAA 1360 0.0 22.172794 1 GATTACG 70 5.099124E-6 21.142857 1 ACGCAAT 45 0.0038249318 20.555555 11 TGCCGTC 2170 0.0 20.375576 35 CGGATCG 55 5.14145E-4 20.181818 37 ATGCCGT 2260 0.0 19.646017 34 TACACAT 3575 0.0 19.095104 5 ATACACA 3605 0.0 18.782248 4 TATGCCG 2395 0.0 18.538622 33 CGCGATA 210 0.0 18.500002 34 AAGCTAG 80 1.615794E-5 18.5 5 >>END_MODULE