##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630893.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 620305 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45921764293372 31.0 31.0 34.0 28.0 34.0 2 31.45260637911995 31.0 31.0 34.0 28.0 34.0 3 30.935541386898382 31.0 31.0 34.0 27.0 34.0 4 35.09264797156238 37.0 35.0 37.0 32.0 37.0 5 35.28343476193163 37.0 35.0 37.0 33.0 37.0 6 35.47507758280201 37.0 35.0 37.0 33.0 37.0 7 35.47173406630609 37.0 35.0 37.0 33.0 37.0 8 35.49321382223261 37.0 35.0 37.0 33.0 37.0 9 37.28341058027905 39.0 37.0 39.0 34.0 39.0 10 37.10042640314039 39.0 37.0 39.0 33.0 39.0 11 37.15977785121835 39.0 37.0 39.0 33.0 39.0 12 37.06714116442718 39.0 37.0 39.0 33.0 39.0 13 37.1530746971248 39.0 37.0 39.0 33.0 39.0 14 38.29827746028164 40.0 38.0 41.0 33.0 41.0 15 38.30273333279597 40.0 38.0 41.0 33.0 41.0 16 38.2964283699148 40.0 38.0 41.0 33.0 41.0 17 38.25030751001523 40.0 38.0 41.0 33.0 41.0 18 38.267640918580376 40.0 38.0 41.0 33.0 41.0 19 38.3202940488953 40.0 38.0 41.0 34.0 41.0 20 38.30924948210961 40.0 38.0 41.0 34.0 41.0 21 38.28132612182716 40.0 38.0 41.0 34.0 41.0 22 38.195610224002706 40.0 38.0 41.0 33.0 41.0 23 38.20585034781277 40.0 38.0 41.0 34.0 41.0 24 38.16743053820298 40.0 38.0 41.0 33.0 41.0 25 38.10601720121553 40.0 37.0 41.0 33.0 41.0 26 38.04372203996421 40.0 37.0 41.0 33.0 41.0 27 37.95354382118474 40.0 37.0 41.0 33.0 41.0 28 37.93269440033532 40.0 37.0 41.0 33.0 41.0 29 37.879241663375275 40.0 37.0 41.0 33.0 41.0 30 37.79898598270206 40.0 37.0 41.0 33.0 41.0 31 37.77448029598343 40.0 37.0 41.0 33.0 41.0 32 37.670123568244655 40.0 37.0 41.0 32.0 41.0 33 37.63787169215144 40.0 37.0 41.0 32.0 41.0 34 37.55886539686122 40.0 37.0 41.0 32.0 41.0 35 37.547171149676366 40.0 37.0 41.0 32.0 41.0 36 37.529473404212446 40.0 37.0 41.0 32.0 41.0 37 37.46595465134087 39.0 36.0 41.0 32.0 41.0 38 37.43067684445555 39.0 36.0 41.0 32.0 41.0 39 37.3194025519704 39.0 36.0 41.0 31.0 41.0 40 37.215677771418896 39.0 36.0 41.0 31.0 41.0 41 37.15661327895148 39.0 36.0 41.0 31.0 41.0 42 37.08552083249369 39.0 36.0 41.0 31.0 41.0 43 36.42280329837741 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 10.0 11 15.0 12 10.0 13 5.0 14 10.0 15 9.0 16 5.0 17 8.0 18 13.0 19 27.0 20 69.0 21 126.0 22 216.0 23 438.0 24 805.0 25 1446.0 26 2266.0 27 3474.0 28 5110.0 29 7520.0 30 10274.0 31 13644.0 32 17970.0 33 23270.0 34 30886.0 35 42032.0 36 58986.0 37 86577.0 38 147069.0 39 168007.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.44172624757176 22.556806732172078 14.560095436922161 23.441371583334007 2 14.262499899243114 22.492805958359195 40.79589879172343 22.448795350674263 3 14.859947928841457 28.06941746398949 33.78257470115508 23.288059906013977 4 11.232377620686599 19.283578239736904 37.61423815703565 31.869805982540843 5 12.816275864292564 37.459475580561175 35.93490299127042 13.789345563875836 6 28.331868999927458 39.54103223414288 17.559748833235265 14.567349932694402 7 26.220971941222466 32.329579803483774 21.949202408492596 19.50024584680117 8 25.170359742384797 34.54735976656645 22.297095783525847 17.98518470752291 9 23.75121915831728 14.637960358210881 19.635340679182015 41.975479804289826 10 14.64650454212041 28.76488179202167 33.66311733743884 22.925496328419083 11 31.98458822675942 23.352383101861182 24.429756329547562 20.23327234183184 12 20.847325106197758 25.656088537090625 29.53160138963897 23.96498496707265 13 29.002829253351177 20.617599406743455 26.901927277710158 23.47764406219521 14 21.905191800807668 22.164096694368094 26.18679520558435 29.743916299239892 15 23.52165466988014 29.063767017838 23.396877342597595 24.01770096968427 16 25.798437865243713 27.20935668743602 22.86971731648141 24.122488130838864 17 22.36174140140737 29.65379934064694 24.23001587928519 23.754443378660497 18 23.553574451278 24.766042511345226 26.88757949718284 24.792803540193937 19 24.681406727335748 27.29576579263427 26.562900508620757 21.459926971409228 20 23.098798171867067 27.69008794060986 25.01462989980735 24.19648398771572 21 24.576780777198316 25.69252222696899 25.15778528304624 24.572911712786453 22 23.65610465819234 28.98960994994398 25.533084530996845 21.82120086086683 23 22.657563617897647 24.99125430231902 26.851145807304473 25.50003627247886 24 23.74299739644207 27.94560740280991 27.142776537348563 21.168618663399457 25 22.889062638540718 28.632527546932558 25.631584462482166 22.846825352044558 26 25.03494248796963 25.164072512715517 26.441508612698595 23.35947638661626 27 22.90873038263435 29.65428297369842 24.93354075817541 22.503445885491814 28 21.530537396925705 24.65883718493322 27.605613367617543 26.205012050523536 29 24.044461998532977 26.283683026898057 28.381199571178694 21.290655403390268 30 22.825061864727836 27.305277242646763 26.149233038585855 23.720427854039546 31 22.30644602252118 24.135385012211735 27.13100813309581 26.42716083217127 32 25.57387091833856 26.082008044429756 26.2694964573879 22.07462457984379 33 21.82635961341598 24.582423162798946 28.075704693658764 25.515512530126312 34 22.897123189398762 27.229669275598294 28.100692401318707 21.772515133684237 35 24.007867097637455 25.630455985362037 28.75101764454583 21.61065927245468 36 23.019482351423896 25.15149805337697 24.582261951781785 27.246757643417354 37 22.755902338365804 26.736363563085902 27.94447892568978 22.56325517285851 38 22.279362571638146 24.15730971054562 27.754088714422743 25.809239003393493 39 24.491500149120192 25.16649067797293 26.660433174003114 23.681575998903764 40 22.263402680939215 24.93644255648431 30.56399674353745 22.23615801903902 41 23.19520236012929 26.20065935306019 25.64947888538703 24.95465940142349 42 22.717211694247187 26.466496320358534 28.431013775481418 22.385278209912865 43 24.428950274461755 23.74589919475097 27.987683478288904 23.83746705249837 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 7.0 1 9.0 2 11.0 3 67.5 4 124.0 5 124.0 6 172.0 7 220.0 8 213.5 9 207.0 10 306.0 11 405.0 12 405.0 13 630.0 14 855.0 15 2013.0 16 3171.0 17 3615.5 18 4060.0 19 4060.0 20 4053.0 21 4046.0 22 5077.5 23 6109.0 24 7909.5 25 9710.0 26 9710.0 27 11444.0 28 13178.0 29 15348.0 30 17518.0 31 20188.0 32 22858.0 33 22858.0 34 29932.5 35 37007.0 36 37969.5 37 38932.0 38 38459.5 39 37987.0 40 37987.0 41 38038.0 42 38089.0 43 39651.0 44 41213.0 45 40595.0 46 39977.0 47 39977.0 48 38893.5 49 37810.0 50 39662.5 51 41515.0 52 52948.0 53 64381.0 54 64381.0 55 52616.0 56 40851.0 57 41056.0 58 41261.0 59 35244.0 60 29227.0 61 29227.0 62 23403.0 63 17579.0 64 13495.5 65 9412.0 66 7904.5 67 6397.0 68 6397.0 69 5541.5 70 4686.0 71 5223.0 72 5760.0 73 5202.0 74 4644.0 75 4644.0 76 2608.0 77 572.0 78 427.5 79 283.0 80 203.0 81 123.0 82 123.0 83 97.5 84 72.0 85 52.0 86 32.0 87 21.5 88 11.0 89 11.0 90 7.5 91 4.0 92 2.0 93 0.0 94 0.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 620305.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.35236879136865 #Duplication Level Percentage of deduplicated Percentage of total 1 82.01509921206164 39.65624323562293 2 10.69083282957464 10.338541833249284 3 2.875962594705325 4.1717881202812 4 1.2199084737438928 2.359418576567214 5 0.6335304090235644 1.5316347988827004 6 0.442110726060708 1.2826260523864266 7 0.2980398334295409 1.0087652358352268 8 0.21762367006559702 0.8418095962194304 9 0.1760983437174762 0.7663294853078946 >10 1.1962595411226118 11.352713262041844 >50 0.1241258920418305 4.183613362777874 >100 0.09367991771789831 9.256655003767701 >500 0.011040847445323729 3.7731950595574597 >1k 0.004349424751188135 3.949204158545563 >5k 0.001003713404120339 3.7018531361624656 >10k+ 3.345711347067796E-4 1.8256090827948008 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGT 11285 1.8192663286609005 No Hit ATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATG 9933 1.6013090334593465 No Hit TCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTT 7520 1.2123068490500641 Illumina PCR Primer Index 11 (95% over 22bp) ACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCC 5430 0.8753758231837563 No Hit GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG 3899 0.6285617559103989 No Hit CATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTC 2595 0.41834258953256864 No Hit CTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTTC 2524 0.40689660731414384 Illumina PCR Primer Index 11 (95% over 23bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2040 0.32887047500826205 No Hit ATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAA 1982 0.3195202360129291 No Hit GTATTTACAGTTTTCAGTTTCTAATGCAAGGGTCTCGCTGAAG 1966 0.3169408597383545 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1945 0.31355542837797534 No Hit GGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTC 1446 0.23311113081467988 No Hit GTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAG 1415 0.22811358928269157 No Hit CACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCG 1391 0.22424452487082966 No Hit AGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAAGAAAT 1173 0.18910052312975068 No Hit ATGCAAGGGTCTCGCTGAAGACTTGGAGGATTAGGGAAGAGAG 1018 0.16411281546980921 No Hit GAGATGGGGTGTGGGGGCGAGGGATCAGAGGTCTGATATGGAC 1018 0.16411281546980921 No Hit CTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAAT 991 0.15976011800646456 No Hit GTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAA 990 0.15959890698930365 No Hit AGCTAACAGGATGTGAAAGTCTTCCAGAAGAAATTCTTGCAGC 964 0.1554074205431199 No Hit TTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTA 917 0.147830502736557 No Hit GTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTC 911 0.14686323663359155 No Hit GCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCT 875 0.14105964001579868 No Hit ATTTTATTTTGTATTTACAGTTTTCAGTTTCTAATGCAAGGGT 862 0.1389638967927068 No Hit GTCCATCGTCCTGGCCCTGGGCTGTGTCACCGGCGCTCCCTCG 843 0.13590088746664947 No Hit GGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAAC 816 0.1315481900033048 No Hit ATTTCATCCTGCTCAGCAGCCTGGGACAGATCTTCAGGTTCCA 808 0.1302585018660175 No Hit TATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTAT 729 0.1175228315103054 No Hit GGTCTGATATGGACAATACTAGTTAAGAAAGCTAACAGGATGT 729 0.1175228315103054 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 713 0.11494345523573081 No Hit ACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGT 702 0.11317013404696077 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 679 0.10946228065225978 No Hit GTCCTGGCCCTGGGCTGTGTCACCGGCGCTCCCTCGGACCCCA 674 0.10865622556645521 No Hit AACTAGTATTGTCCATATCAGACCTCTGATCCCTCGCCCCCAC 674 0.10865622556645521 No Hit GCCCTGGGCTGTGTCACCGGCGCTCCCTCGGACCCCAGACTCC 671 0.10817259251497248 No Hit GATCAGAGGTCTGATATGGACAATACTAGTTAAGAAAGCTAAC 640 0.10317505098298418 No Hit TTCTAATGCAAGGGTCTCGCTGAAGACTTGGAGGATTAGGGAA 629 0.10140172979421413 No Hit GTTTTCAGTTTCTAATGCAAGGGTCTCGCTGAAGACTTGGAGG 625 0.1007568857255705 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.6121101716091277E-4 0.0 5 0.0 0.0 0.0 1.6121101716091277E-4 0.0 6 0.0 0.0 0.0 1.6121101716091277E-4 0.0 7 0.0 0.0 0.0 1.6121101716091277E-4 0.0 8 0.0 0.0 0.0 1.6121101716091277E-4 0.0 9 0.0 0.0 0.0 1.6121101716091277E-4 0.0 10 0.0 0.0 0.0 1.6121101716091277E-4 0.0 11 0.0 0.0 0.0 1.6121101716091277E-4 0.0 12 0.0 0.0 0.0 1.6121101716091277E-4 0.0 13 0.0 0.0 0.0 1.6121101716091277E-4 0.0 14 0.0 0.0 0.0 1.6121101716091277E-4 0.0 15 0.0 0.0 0.0 1.6121101716091277E-4 0.0 16 0.0 0.0 0.0 3.2242203432182554E-4 0.0 17 0.0 0.0 0.0 3.2242203432182554E-4 0.0 18 0.0 0.0 0.0 3.2242203432182554E-4 0.0 19 0.0 0.0 0.0 3.2242203432182554E-4 0.0 20 0.0 0.0 0.0 3.2242203432182554E-4 0.0 21 0.0 0.0 0.0 4.8363305148273834E-4 0.0 22 0.0 0.0 0.0 9.672661029654767E-4 0.0 23 0.0 0.0 0.0 0.001450899154448215 0.0 24 0.0 0.0 0.0 0.0017733211887700406 0.0 25 0.0 0.0 0.0 0.002095743223091866 0.0 26 0.0 0.0 0.0 0.002256954240252779 0.0 27 0.0 0.0 0.0 0.0025793762745746044 0.0 28 0.0 0.0 0.0 0.0074157067894019876 0.0 29 0.0 0.0 0.0 0.02095743223091866 0.0 30 0.0 0.0 0.0 0.032564625466504384 0.0 31 0.0 0.0 0.0 0.07238374670524984 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATTACG 75 0.0 34.533333 1 CTTATAC 1285 0.0 32.968872 1 CGTCTTC 370 0.0 31.5 37 TCGAGTA 25 0.0054944176 29.599998 2 TATACAC 1470 0.0 29.323128 3 TTATACA 1495 0.0 28.585287 2 TGCGTTA 35 8.8647753E-4 26.42857 37 TTACGGG 100 0.0 25.899998 3 GTATCAA 1070 0.0 25.761683 1 ATTACGG 105 1.8189894E-12 24.666666 2 CCGTCTT 1025 0.0 24.185366 37 GCCGTCT 1035 0.0 23.951689 36 GGTATCA 310 0.0 23.870966 1 AACCACG 95 1.6730155E-7 19.473684 35 TGTGCTA 95 1.6730155E-7 19.473684 26 GTGCTAG 105 2.2544555E-8 19.38095 27 ATAGGAC 70 1.2180497E-4 18.5 3 GCGAACT 60 9.2302816E-4 18.5 28 CTATTAA 130 6.9485395E-10 18.5 1 CCGTGGC 50 0.0070313215 18.499998 9 >>END_MODULE