##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630884.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 703073 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.65242016120659 31.0 31.0 34.0 30.0 34.0 2 31.63945422452576 33.0 31.0 34.0 30.0 34.0 3 31.130100288305766 31.0 31.0 34.0 27.0 34.0 4 35.25600328842098 37.0 35.0 37.0 32.0 37.0 5 35.44446451506458 37.0 35.0 37.0 33.0 37.0 6 35.62536180453523 37.0 35.0 37.0 33.0 37.0 7 35.63800771754853 37.0 35.0 37.0 33.0 37.0 8 35.66316015548883 37.0 35.0 37.0 33.0 37.0 9 37.431396170810146 39.0 37.0 39.0 34.0 39.0 10 37.28187257937654 39.0 37.0 39.0 34.0 39.0 11 37.339381543595046 39.0 37.0 39.0 34.0 39.0 12 37.28794591742251 39.0 37.0 39.0 34.0 39.0 13 37.344076646379534 39.0 37.0 39.0 34.0 39.0 14 38.566207207501925 40.0 38.0 41.0 34.0 41.0 15 38.57064202437016 40.0 38.0 41.0 34.0 41.0 16 38.57263043809107 40.0 38.0 41.0 34.0 41.0 17 38.556255182605504 40.0 38.0 41.0 34.0 41.0 18 38.57871231010151 40.0 38.0 41.0 34.0 41.0 19 38.612321906829024 40.0 38.0 41.0 34.0 41.0 20 38.60059339499597 40.0 38.0 41.0 34.0 41.0 21 38.57518209346682 40.0 38.0 41.0 34.0 41.0 22 38.514407465512114 40.0 38.0 41.0 34.0 41.0 23 38.497154634013825 40.0 38.0 41.0 34.0 41.0 24 38.46910918211907 40.0 38.0 41.0 34.0 41.0 25 38.43982772770395 40.0 38.0 41.0 34.0 41.0 26 38.342842066186584 40.0 38.0 41.0 34.0 41.0 27 38.28652216768387 40.0 38.0 41.0 34.0 41.0 28 38.25177470902737 40.0 38.0 41.0 34.0 41.0 29 38.171248220312826 40.0 38.0 41.0 34.0 41.0 30 38.10818648988085 40.0 38.0 41.0 33.0 41.0 31 38.06896012220637 40.0 37.0 41.0 33.0 41.0 32 37.991295356243235 40.0 37.0 41.0 33.0 41.0 33 37.99083309983458 40.0 37.0 41.0 33.0 41.0 34 37.92244759790235 40.0 37.0 41.0 33.0 41.0 35 37.88070371070998 40.0 37.0 41.0 33.0 41.0 36 37.85451155143207 40.0 37.0 41.0 33.0 41.0 37 37.80513545535101 40.0 37.0 41.0 33.0 41.0 38 37.77386843186981 40.0 37.0 41.0 33.0 41.0 39 37.705204153764974 40.0 37.0 41.0 33.0 41.0 40 37.64992255427246 40.0 37.0 41.0 33.0 41.0 41 37.598098632716656 40.0 37.0 41.0 32.0 41.0 42 37.53575802228218 40.0 37.0 41.0 32.0 41.0 43 36.98755463515168 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 5.0 11 2.0 12 4.0 13 2.0 14 5.0 15 2.0 16 6.0 17 6.0 18 7.0 19 15.0 20 33.0 21 88.0 22 210.0 23 370.0 24 665.0 25 1152.0 26 1934.0 27 3118.0 28 4755.0 29 6868.0 30 9772.0 31 13020.0 32 17632.0 33 23320.0 34 31865.0 35 42818.0 36 60360.0 37 92331.0 38 167241.0 39 225462.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.518190856426 22.947261521918776 15.330413769267203 23.20413385238802 2 13.89116066183739 22.888946098058096 40.579285508048244 22.640607732056274 3 14.81496231543524 28.23433697496561 33.7572343127954 23.193466396803746 4 12.05010006073338 18.74997333136104 40.21900997478213 28.980916633123442 5 12.563275790707365 38.72044581430378 36.01219219056912 12.70408620441974 6 27.990550056679748 40.570324845357455 18.294828559765484 13.144296538197315 7 24.638124348396254 33.399376736128396 24.348111789245213 17.614387126230135 8 24.347827323762967 36.28343002789184 21.974816270856653 17.39392637748854 9 24.700422289008394 15.888677278177374 21.1106101357896 38.30029029702463 10 14.225407603477874 29.165819196584135 34.79581778848 21.812955411457985 11 32.1662188705867 23.961665431612364 25.748535358348278 18.123580339452662 12 20.901954704561263 26.347619663960923 31.871797096460824 20.87862853501699 13 27.544223715033862 22.26553999371331 27.322198406139904 22.868037885112926 14 21.203772581225564 21.832299064250797 28.701144831333302 28.262783523190336 15 22.490125491947495 29.851381008799937 24.51153720879624 23.146956290456323 16 22.551001105148398 29.004811733632213 25.50560183650915 22.938585324710235 17 21.215720131479944 29.33137810725202 27.46912482772059 21.983776933547443 18 22.36936989473355 27.782605789157028 27.990550056679748 21.857474259429672 19 22.918530508211806 28.140321133082907 27.97831804094312 20.96283031776217 20 22.63349609500009 27.276968394462596 27.7956912013404 22.29384430919691 21 23.062754507711148 27.20343406730169 28.04616305845908 21.687648366528084 22 21.457800256872332 28.68990844478454 28.12424883333594 21.72804246500719 23 22.428823180523217 26.95025978810166 28.047443153129194 22.573473878245927 24 22.326984537878715 27.815888250579956 28.02383251810267 21.833294693438663 25 21.992168665273734 27.68105161199477 28.108176533588974 22.21860318914252 26 22.78468949881449 27.38392741578755 28.07361397749594 21.757769107902025 27 21.773983640390114 28.388232800861363 27.721587943215 22.11619561553352 28 22.1877386843187 27.295174185326417 28.09679791429908 22.4202892160558 29 22.29427100742028 27.78232132367478 28.163362837144934 21.760044831760002 30 21.840548563235966 27.150807953085952 28.400180351115743 22.60846313256234 31 23.05692296532508 27.03218584698886 27.6011168114833 22.309774376202757 32 21.74141234267281 27.76895144600916 28.702424926003417 21.787211285314612 33 21.514835586062897 27.197460292174497 28.702424926003417 22.58527919575919 34 22.344052466813547 27.66369921757769 27.94403995033233 22.048208365276437 35 21.775548200542474 27.279670816543945 29.48797635522912 21.456804627684463 36 22.56010400058031 27.22718693506933 27.36301920284238 22.84968986150798 37 22.371645618591526 27.255633483294055 28.301328596034836 22.071392302079584 38 22.174226573911955 27.18025013049854 28.22637194146269 22.41915135412681 39 22.556690414793344 27.121934706637862 27.95641419881008 22.364960679758717 40 21.783228768563152 27.017251409170882 29.324693168419213 21.874826653846753 41 22.18261830563825 27.07514013480819 27.86510077900872 22.877140780544835 42 22.070254440150595 27.0794071170419 28.712665683364317 22.137672759443188 43 22.44105519625985 26.520432444426113 28.681374480317125 22.35713787899692 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 19.5 2 32.0 3 92.5 4 153.0 5 153.0 6 183.0 7 213.0 8 226.0 9 239.0 10 345.5 11 452.0 12 452.0 13 728.5 14 1005.0 15 2402.0 16 3799.0 17 4483.0 18 5167.0 19 5167.0 20 5555.5 21 5944.0 22 7348.5 23 8753.0 24 11367.5 25 13982.0 26 13982.0 27 17264.0 28 20546.0 29 24248.0 30 27950.0 31 31515.0 32 35080.0 33 35080.0 34 39352.5 35 43625.0 36 46251.5 37 48878.0 38 50887.5 39 52897.0 40 52897.0 41 53860.5 42 54824.0 43 54740.0 44 54656.0 45 53554.0 46 52452.0 47 52452.0 48 50943.0 49 49434.0 50 47594.5 51 45755.0 52 45902.5 53 46050.0 54 46050.0 55 40243.0 56 34436.0 57 32642.0 58 30848.0 59 27184.5 60 23521.0 61 23521.0 62 19569.5 63 15618.0 64 12973.0 65 10328.0 66 8633.0 67 6938.0 68 6938.0 69 5574.5 70 4211.0 71 3385.5 72 2560.0 73 1919.0 74 1278.0 75 1278.0 76 974.0 77 670.0 78 522.5 79 375.0 80 290.0 81 205.0 82 205.0 83 157.5 84 110.0 85 81.0 86 52.0 87 36.0 88 20.0 89 20.0 90 13.5 91 7.0 92 3.5 93 0.0 94 1.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 703073.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.69849894047447 #Duplication Level Percentage of deduplicated Percentage of total 1 82.02478525452406 53.88905267136994 2 10.928216217553203 14.3593480318039 3 3.115217917756348 6.139954232071876 4 1.3365996981432282 3.5125037540920547 5 0.7044790940854201 2.314160950817869 6 0.43165354738547923 1.701539407533417 7 0.27059078588622204 1.2444185921893678 8 0.20198467793139055 1.0616072119254032 9 0.14446874173710697 0.8542241528352302 >10 0.7829002212346204 9.15386558827557 >50 0.04503164666558797 2.0210278352887183 >100 0.011690748358735268 1.1674582201904178 >500 8.659813594771134E-4 0.3461980149798532 >1k 0.0015154673790849483 2.2346413366263245 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATG 3116 0.4431972213411694 No Hit CTTATACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGT 2972 0.4227157066193695 No Hit TCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTCTT 2308 0.32827316651329236 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2205 0.3136231941775605 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2189 0.3113474703195827 No Hit ACACATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCC 1901 0.270384440875983 No Hit CATCTCCGAGCCCACGAGACTCGACGTCATCTCGTATGCCGTC 1020 0.14507739594608243 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.422327411236102E-4 0.0 0.0 0.0 6 0.0 1.422327411236102E-4 0.0 0.0 0.0 7 0.0 1.422327411236102E-4 0.0 0.0 0.0 8 0.0 1.422327411236102E-4 0.0 0.0 0.0 9 0.0 1.422327411236102E-4 0.0 0.0 0.0 10 0.0 1.422327411236102E-4 0.0 1.422327411236102E-4 0.0 11 0.0 1.422327411236102E-4 0.0 1.422327411236102E-4 0.0 12 0.0 1.422327411236102E-4 0.0 2.844654822472204E-4 0.0 13 0.0 2.844654822472204E-4 0.0 2.844654822472204E-4 0.0 14 0.0 2.844654822472204E-4 0.0 2.844654822472204E-4 0.0 15 0.0 2.844654822472204E-4 0.0 4.266982233708306E-4 0.0 16 0.0 2.844654822472204E-4 0.0 4.266982233708306E-4 0.0 17 0.0 2.844654822472204E-4 0.0 4.266982233708306E-4 0.0 18 0.0 2.844654822472204E-4 0.0 4.266982233708306E-4 0.0 19 0.0 2.844654822472204E-4 0.0 4.266982233708306E-4 0.0 20 0.0 2.844654822472204E-4 0.0 4.266982233708306E-4 0.0 21 0.0 2.844654822472204E-4 0.0 5.689309644944408E-4 0.0 22 0.0 2.844654822472204E-4 0.0 7.111637056180511E-4 0.0 23 0.0 2.844654822472204E-4 0.0 0.0011378619289888817 0.0 24 0.0 2.844654822472204E-4 0.0 0.0018490256346069328 0.0 25 0.0 2.844654822472204E-4 0.0 0.001991258375730543 0.0 26 0.0 2.844654822472204E-4 0.0 0.002133491116854153 0.0 27 0.0 2.844654822472204E-4 0.0 0.002702422081348594 0.0 28 0.0 2.844654822472204E-4 0.0 0.0069694043150569 0.0 29 0.0 2.844654822472204E-4 0.0 0.01422327411236102 0.0 30 0.0 2.844654822472204E-4 0.0 0.025317427920002616 0.0 31 0.0 2.844654822472204E-4 0.0 0.05305281243910661 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTTACC 30 3.59807E-4 30.833332 8 CCGGTCG 30 3.59807E-4 30.833332 9 GGCGTAA 25 0.0054949108 29.599998 15 TATATCG 35 8.8659575E-4 26.42857 5 GGTATCA 405 0.0 25.580246 1 CTTATAC 540 0.0 25.351852 1 GGTTCGC 45 1.322498E-4 24.666668 23 GATTACG 55 1.9012963E-5 23.545454 1 CCGTCTT 455 0.0 23.175823 37 ATACCGC 40 0.0019304457 23.125 6 TATACAC 645 0.0 22.945736 3 GCCGTCT 475 0.0 22.2 36 CCGCCGT 50 2.7006568E-4 22.199999 24 TTATACA 735 0.0 20.891155 2 TACCGCA 80 6.952214E-7 20.8125 7 CGTTATG 45 0.003824352 20.555557 12 GTATCAA 945 0.0 20.359789 1 ATAATAC 155 1.8189894E-12 19.096775 3 CTAGAAC 110 3.8453436E-8 18.5 3 GACTATA 60 9.2319545E-4 18.5 1 >>END_MODULE