##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630882.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1179698 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.544076534841967 31.0 31.0 34.0 30.0 34.0 2 31.52380778809492 31.0 31.0 34.0 30.0 34.0 3 30.997147575057344 31.0 31.0 34.0 27.0 34.0 4 35.148278627241886 37.0 35.0 37.0 32.0 37.0 5 35.340691431196795 37.0 35.0 37.0 33.0 37.0 6 35.52873616807013 37.0 35.0 37.0 33.0 37.0 7 35.54661955856499 37.0 35.0 37.0 33.0 37.0 8 35.568750646351866 37.0 35.0 37.0 33.0 37.0 9 37.33357605081979 39.0 37.0 39.0 34.0 39.0 10 37.17930945038476 39.0 37.0 39.0 33.0 39.0 11 37.23743110524897 39.0 37.0 39.0 34.0 39.0 12 37.17855756303732 39.0 37.0 39.0 33.0 39.0 13 37.24404296692882 39.0 37.0 39.0 34.0 39.0 14 38.43488163919918 40.0 38.0 41.0 34.0 41.0 15 38.43476126940963 40.0 38.0 41.0 34.0 41.0 16 38.44674145416878 40.0 38.0 41.0 34.0 41.0 17 38.41452303894726 40.0 38.0 41.0 34.0 41.0 18 38.427833225113545 40.0 38.0 41.0 34.0 41.0 19 38.46374919682834 40.0 38.0 41.0 34.0 41.0 20 38.4435694559116 40.0 38.0 41.0 34.0 41.0 21 38.41472902386882 40.0 38.0 41.0 34.0 41.0 22 38.36698375346911 40.0 38.0 41.0 34.0 41.0 23 38.342632605972035 40.0 38.0 41.0 34.0 41.0 24 38.3248178771177 40.0 38.0 41.0 34.0 41.0 25 38.31044216401147 40.0 38.0 41.0 34.0 41.0 26 38.19646299307111 40.0 38.0 41.0 34.0 41.0 27 38.15771324525429 40.0 38.0 41.0 33.0 41.0 28 38.11100807155729 40.0 38.0 41.0 33.0 41.0 29 38.04338059401643 40.0 37.0 41.0 33.0 41.0 30 37.97551407224561 40.0 37.0 41.0 33.0 41.0 31 37.954487504429096 40.0 37.0 41.0 33.0 41.0 32 37.89993625487201 40.0 37.0 41.0 33.0 41.0 33 37.8714272635878 40.0 37.0 41.0 33.0 41.0 34 37.811423771168556 40.0 37.0 41.0 33.0 41.0 35 37.77879931982592 40.0 37.0 41.0 33.0 41.0 36 37.74239169685801 40.0 37.0 41.0 33.0 41.0 37 37.68112262629927 40.0 37.0 41.0 33.0 41.0 38 37.65334433049814 40.0 37.0 41.0 33.0 41.0 39 37.589926404893454 40.0 37.0 41.0 32.0 41.0 40 37.55176918160411 40.0 37.0 41.0 32.0 41.0 41 37.47979652419517 40.0 37.0 41.0 32.0 41.0 42 37.435591142817906 40.0 37.0 41.0 32.0 41.0 43 36.85447546745014 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 4.0 11 9.0 12 5.0 13 8.0 14 3.0 15 3.0 16 9.0 17 8.0 18 14.0 19 29.0 20 77.0 21 159.0 22 322.0 23 750.0 24 1217.0 25 2186.0 26 3553.0 27 5755.0 28 8505.0 29 12722.0 30 17534.0 31 23882.0 32 31498.0 33 41481.0 34 55658.0 35 75945.0 36 106300.0 37 159650.0 38 283964.0 39 348441.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.04126479827888 21.117692833250544 14.569661048844704 24.27138131962587 2 14.719190843758318 21.739885970816257 40.39839009644841 23.14253308897701 3 15.174392090179012 28.020561194475196 32.7109989166719 24.0940477986739 4 12.401309487682441 18.21364450901841 39.869186859687815 29.515859143611333 5 12.663919070813037 38.43017450228787 36.0014173118883 12.904489115010792 6 28.739897838260305 40.00608630344376 17.97036190618277 13.283653952113166 7 25.955032559180403 32.25537383296403 24.133464666380718 17.65612894147485 8 24.85670061320779 35.91342869107178 21.282226468129977 17.94764422759045 9 25.22230265712072 15.594753911594323 20.308672219500245 38.87427121178471 10 14.872619941713896 28.602065952472582 34.15594499609222 22.3693691097213 11 32.426434562065886 23.799904721377843 25.168814391479856 18.60484632507642 12 21.95553438252841 25.937231393119255 30.229431600290923 21.877802624061413 13 27.635208332980138 21.503893369319947 27.010641706606265 23.85025659109365 14 21.83770761669512 21.196611336121617 27.6144403059088 29.35124074127446 15 23.366743013889995 29.128471863137857 23.960708588130185 23.544076534841967 16 23.31435672519577 27.814152435623356 24.789140949632873 24.082349889548002 17 21.922983678873745 28.667930266898818 26.296221575352334 23.112864478875103 18 23.140583437456026 27.072267648160803 27.05667043599294 22.730478478390232 19 24.21636723975119 26.700308044940314 27.034122292315494 22.049202422993 20 23.59112247371785 26.887728893326933 26.670215597551238 22.850933035403976 21 23.736583430674628 26.681404901932527 26.518227546372035 23.063784121020802 22 22.750314063429794 27.957155136314547 26.867384703542776 22.425146096712886 23 23.258579738204187 26.316565765136502 26.9982656578209 23.426588838838413 24 22.91323711661798 27.34208246517329 26.72785746860637 23.016822949602357 25 23.17084541975997 27.020559499126044 27.309277459146326 22.499317621967656 26 23.266802181575287 27.157374175424557 27.35623863056477 22.219585012435385 27 23.256630086683202 27.60503111813362 26.40548682798479 22.732851967198382 28 22.68275439985488 26.376581124999788 27.682593341685752 23.25807113345958 29 23.19737763393682 26.63732582406684 27.685729737610814 22.479566804385527 30 23.796937860367652 26.544081620889415 27.278506872097775 22.380473646645157 31 22.916288745085605 26.572733021502117 26.776853059003237 23.734125174409044 32 22.473294012535412 27.079388114585257 27.56154541246997 22.88577246040936 33 23.09633482467547 27.213151162416143 27.185093134005484 22.505420878902907 34 23.014958065538806 26.899681104825135 27.015642986594873 23.069717843041186 35 23.0553073752774 26.51288719655369 28.52119779808053 21.91060763008838 36 23.832285890117642 27.38344898440109 25.69683088383637 23.087434241644896 37 22.90408223121511 26.658178618595606 27.394807823697253 23.042931326492035 38 23.493470362753857 26.37276658941526 27.101258118603234 23.03250492922765 39 22.901793509864387 26.667163969083614 27.102360095549876 23.32868242550212 40 22.739548596335673 25.928246042631248 28.65826677675134 22.67393858428174 41 22.525002161570164 26.167459807510056 27.201453253290246 24.10608477762953 42 22.614686131535358 26.521872547041703 27.598334488996336 23.265106832426603 43 23.229334965389448 25.397262689264537 28.287409150477494 23.085993194868518 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 19.5 2 24.0 3 85.5 4 147.0 5 147.0 6 183.5 7 220.0 8 235.5 9 251.0 10 380.5 11 510.0 12 510.0 13 771.5 14 1033.0 15 2553.0 16 4073.0 17 4885.5 18 5698.0 19 5698.0 20 5894.0 21 6090.0 22 8099.5 23 10109.0 24 13720.0 25 17331.0 26 17331.0 27 22109.5 28 26888.0 29 32286.0 30 37684.0 31 44285.5 32 50887.0 33 50887.0 34 58620.5 35 66354.0 36 71811.0 37 77268.0 38 82142.0 39 87016.0 40 87016.0 41 90483.0 42 93950.0 43 94843.5 44 95737.0 45 94110.5 46 92484.0 47 92484.0 48 88250.0 49 84016.0 50 87257.5 51 90499.0 52 80387.0 53 70275.0 54 70275.0 55 72466.0 56 74657.0 57 64838.5 58 55020.0 59 46182.5 60 37345.0 61 37345.0 62 34602.0 63 31859.0 64 25559.5 65 19260.0 66 15676.5 67 12093.0 68 12093.0 69 10152.5 70 8212.0 71 7229.0 72 6246.0 73 7024.0 74 7802.0 75 7802.0 76 6720.0 77 5638.0 78 3924.5 79 2211.0 80 1342.5 81 474.0 82 474.0 83 335.0 84 196.0 85 138.0 86 80.0 87 55.5 88 31.0 89 31.0 90 20.0 91 9.0 92 7.0 93 5.0 94 2.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1179698.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.51021109812272 #Duplication Level Percentage of deduplicated Percentage of total 1 79.20173692355912 39.21294714423393 2 12.071256613236725 11.953009262819203 3 3.506452621703681 5.208156285183453 4 1.4802736625250184 2.9315464605841965 5 0.8114677471479096 2.0087969730305537 6 0.519168829316584 1.542249500101759 7 0.33701478954484615 1.1679971361488313 8 0.25065101498303727 0.9927827731015115 9 0.1891255418512788 0.8427280950993291 >10 1.3377108164986795 13.282204269947867 >50 0.17032018549132089 5.819648201252838 >100 0.11827889972085058 10.864566124630702 >500 0.004820682204937885 1.6635507654159654 >1k 0.00154950499444432 1.9391328326730781 >5k 1.7216722160492447E-4 0.5706841757767928 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGT 6695 0.5675181275207722 No Hit ATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATG 4957 0.42019228650044327 No Hit TCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGTCTT 3902 0.33076261890755093 RNA PCR Primer, Index 29 (95% over 23bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2741 0.23234760082665226 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 2694 0.22836353032725326 No Hit ACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCC 2552 0.21632655137162224 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2402 0.20361143275651905 No Hit CATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGTC 1287 0.10909571771758535 RNA PCR Primer, Index 29 (95% over 21bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.476745743402125E-5 0.0 5 0.0 0.0 0.0 8.476745743402125E-5 0.0 6 0.0 0.0 0.0 8.476745743402125E-5 0.0 7 0.0 0.0 0.0 8.476745743402125E-5 0.0 8 0.0 0.0 0.0 8.476745743402125E-5 0.0 9 0.0 0.0 0.0 2.543023723020637E-4 0.0 10 0.0 0.0 0.0 2.543023723020637E-4 8.476745743402125E-5 11 8.476745743402125E-5 0.0 0.0 3.39069829736085E-4 8.476745743402125E-5 12 8.476745743402125E-5 0.0 0.0 3.39069829736085E-4 8.476745743402125E-5 13 8.476745743402125E-5 0.0 0.0 3.39069829736085E-4 8.476745743402125E-5 14 8.476745743402125E-5 0.0 0.0 3.39069829736085E-4 8.476745743402125E-5 15 1.695349148680425E-4 0.0 0.0 4.2383728717010626E-4 8.476745743402125E-5 16 1.695349148680425E-4 0.0 0.0 5.933722020381488E-4 8.476745743402125E-5 17 2.543023723020637E-4 0.0 0.0 5.933722020381488E-4 8.476745743402125E-5 18 2.543023723020637E-4 0.0 0.0 6.7813965947217E-4 8.476745743402125E-5 19 2.543023723020637E-4 0.0 0.0 8.476745743402125E-4 8.476745743402125E-5 20 2.543023723020637E-4 0.0 0.0 8.476745743402125E-4 8.476745743402125E-5 21 2.543023723020637E-4 0.0 0.0 9.324420317742338E-4 8.476745743402125E-5 22 2.543023723020637E-4 0.0 0.0 0.0011019769466422762 8.476745743402125E-5 23 2.543023723020637E-4 0.0 0.0 0.0015258142338123826 8.476745743402125E-5 24 2.543023723020637E-4 0.0 0.0 0.0019496515209824886 8.476745743402125E-5 25 2.543023723020637E-4 0.0 0.0 0.0019496515209824886 8.476745743402125E-5 26 2.543023723020637E-4 0.0 0.0 0.0019496515209824886 8.476745743402125E-5 27 2.543023723020637E-4 0.0 0.0 0.002373488808152595 8.476745743402125E-5 28 3.39069829736085E-4 0.0 0.0 0.0067813965947217 1.695349148680425E-4 29 3.39069829736085E-4 0.0 0.0 0.015427677252991868 1.695349148680425E-4 30 3.39069829736085E-4 0.0 0.0 0.030770587048549715 1.695349148680425E-4 31 3.39069829736085E-4 0.0 0.0 0.07315431576556033 1.695349148680425E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 1160 0.0 25.995691 3 GTATCAA 1600 0.0 25.553125 1 CTTATAC 1155 0.0 25.147184 1 GATTACG 120 0.0 24.666668 1 TTATACA 1175 0.0 24.561703 2 GGTATCA 500 0.0 23.31 1 CCGTCTT 595 0.0 21.764706 37 GCCGTCT 595 0.0 21.764706 36 CGGATCG 80 6.9604357E-7 20.8125 37 AAGTCGC 75 9.266114E-6 19.733332 29 GCTAGTC 80 1.6167294E-5 18.5 7 TGCCGTC 710 0.0 18.239437 35 CGTCTTC 270 0.0 17.814816 37 ATGCCGT 730 0.0 17.739725 34 GTACTAG 85 2.7232136E-5 17.411764 1 TTACGGG 195 0.0 17.076923 3 TGCGTTA 65 0.0015799673 17.076923 37 ATACACA 1810 0.0 16.76243 4 TATGCCG 775 0.0 16.709679 33 TTGACGC 100 5.8780533E-6 16.650002 32 >>END_MODULE