##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630873.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1055853 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49164419668268 31.0 31.0 34.0 28.0 34.0 2 31.476952757628194 31.0 31.0 34.0 28.0 34.0 3 30.947910362522055 31.0 31.0 34.0 27.0 34.0 4 35.10743825134749 37.0 35.0 37.0 32.0 37.0 5 35.30210928983485 37.0 35.0 37.0 33.0 37.0 6 35.48719092525191 37.0 35.0 37.0 33.0 37.0 7 35.50209735635548 37.0 35.0 37.0 33.0 37.0 8 35.51998715730315 37.0 35.0 37.0 33.0 37.0 9 37.28783552255854 39.0 37.0 39.0 34.0 39.0 10 37.116654496411904 39.0 37.0 39.0 33.0 39.0 11 37.18394606067322 39.0 37.0 39.0 33.0 39.0 12 37.113932526592244 39.0 37.0 39.0 33.0 39.0 13 37.181769621339335 39.0 37.0 39.0 33.0 39.0 14 38.33784721926253 40.0 38.0 41.0 34.0 41.0 15 38.35115967847797 40.0 38.0 41.0 34.0 41.0 16 38.349243692066985 40.0 38.0 41.0 34.0 41.0 17 38.307053159862214 40.0 38.0 41.0 33.0 41.0 18 38.349457737014525 40.0 38.0 41.0 34.0 41.0 19 38.373858861034634 40.0 38.0 41.0 34.0 41.0 20 38.369487987437644 40.0 38.0 41.0 34.0 41.0 21 38.33351517682859 40.0 38.0 41.0 34.0 41.0 22 38.2696909512972 40.0 38.0 41.0 34.0 41.0 23 38.272916779134974 40.0 38.0 41.0 34.0 41.0 24 38.22982081786006 40.0 38.0 41.0 34.0 41.0 25 38.20462602275127 40.0 38.0 41.0 34.0 41.0 26 38.11251850399629 40.0 37.0 41.0 33.0 41.0 27 38.01448591802078 40.0 37.0 41.0 33.0 41.0 28 38.010547869826574 40.0 37.0 41.0 33.0 41.0 29 37.95078292148623 40.0 37.0 41.0 33.0 41.0 30 37.87471362017251 40.0 37.0 41.0 33.0 41.0 31 37.86003544053955 40.0 37.0 41.0 33.0 41.0 32 37.77785828140849 40.0 37.0 41.0 33.0 41.0 33 37.756454733755554 40.0 37.0 41.0 33.0 41.0 34 37.69338913655594 40.0 37.0 41.0 33.0 41.0 35 37.66665814275282 40.0 37.0 41.0 33.0 41.0 36 37.635818622478695 40.0 37.0 41.0 33.0 41.0 37 37.56858956691888 40.0 37.0 41.0 32.0 41.0 38 37.52775528411625 40.0 37.0 41.0 32.0 41.0 39 37.45990208864302 40.0 37.0 41.0 32.0 41.0 40 37.3906064575277 39.0 37.0 41.0 32.0 41.0 41 37.33332102101334 39.0 36.0 41.0 31.0 41.0 42 37.27237503705535 39.0 36.0 41.0 31.0 41.0 43 36.64534646394905 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 17.0 12 9.0 13 7.0 14 5.0 15 10.0 16 10.0 17 7.0 18 16.0 19 40.0 20 79.0 21 163.0 22 335.0 23 671.0 24 1233.0 25 2203.0 26 3502.0 27 5541.0 28 8493.0 29 12277.0 30 16598.0 31 22383.0 32 29623.0 33 38679.0 34 51630.0 35 69983.0 36 97085.0 37 144047.0 38 254715.0 39 296482.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.353584258414756 21.56635440728965 14.645694050213429 24.43436728408216 2 14.161535744085588 21.93875473195606 40.66513046797235 23.234579055986014 3 14.997258141048045 28.12721089015232 33.313065360424226 23.56246560837541 4 12.123941495643807 18.99289010875567 38.486607510704616 30.396560884895905 5 12.939869470466059 37.92118789263278 35.79371370825295 13.345228928648211 6 28.45329794961988 39.845224666691294 17.835247899092014 13.866229484596815 7 25.239119460758268 32.644316964577456 23.216678836921428 18.89988473774285 8 24.69036882975187 35.592549341622366 21.7057677536551 18.011314074970663 9 24.607876285808725 15.345128535885202 19.92985766010988 40.11713751819619 10 14.640769122216824 28.8524065376525 33.685939235859536 22.820885104271145 11 32.54477659295375 23.155117236963857 25.14677706082191 19.153329109260476 12 21.219052273375176 25.823196979124933 30.177780429662082 22.779970317837805 13 28.683254202999848 21.265176118266464 26.60559755950876 23.44597211922493 14 21.641554269391666 21.55205317406874 27.176794496961225 29.62959805957837 15 23.649883080315156 28.615536443046523 23.36168008235995 24.37290039427837 16 24.199486102705585 27.542849241324312 24.20867298762233 24.04899166834777 17 21.54589701407298 29.41574253234115 25.703104504130785 23.335255949455085 18 23.741562509175047 26.42204928148142 26.551896902314997 23.284491307028535 19 23.931361657351925 27.167986452659605 26.64168212809927 22.2589697618892 20 23.19868390770306 26.828924102124063 26.141044255213558 23.83134773495932 21 24.499812000344747 26.00210445961701 26.375262465513664 23.12282107452458 22 22.173730623486414 28.87381103240697 26.32525550431736 22.627202839789252 23 23.77414280207567 25.961947354413915 26.62889625733885 23.63501358617156 24 23.208154923081146 27.123472680382594 26.535038494942004 23.133333901594256 25 22.83026140949545 27.74780201410613 26.864629830099457 22.557306746298963 26 24.18783675379054 26.289265645880626 26.813675767365343 22.709221832963493 27 22.180360334251077 28.87589465579015 26.41362007779492 22.530124932163854 28 23.31849225223587 26.102591932778523 26.983206942633114 23.595708872352496 29 22.435414778382974 26.201374623171976 27.434121984783864 23.929088613661182 30 23.235715577831385 27.20672290555598 27.3472727737668 22.210288742845833 31 24.253755020822027 25.583675000213095 25.942058222119936 24.22051175684494 32 22.241921934208644 26.327907388623228 27.75698889902288 23.673181778145253 33 23.221414344610473 25.9080572769126 27.635381061568232 23.2351473169087 34 22.132436996437953 27.07147680595689 26.698981771136705 24.09710442646846 35 22.06093083033339 26.269755354201767 29.877738662484266 21.791575152980574 36 23.26876942150091 26.107138020160004 25.91762300244447 24.706469555894618 37 22.670864220682237 26.815664680594743 27.393017778042967 23.120453320680056 38 22.554465441685537 25.8303002406585 27.756894188869097 23.858340128786867 39 23.51908835794377 26.03013866513615 26.912079617143675 23.53869335977641 40 22.239175339749 25.762961321320297 29.728854300740725 22.269009038189974 41 22.930275331888055 26.075978379566095 26.55937900446369 24.43436728408216 42 22.89939982175549 25.834751617886205 28.29087003588568 22.97497852447263 43 23.29585652548224 25.203319022629096 28.343055330618938 23.157769121269723 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 9.5 2 16.0 3 74.5 4 133.0 5 133.0 6 173.5 7 214.0 8 207.5 9 201.0 10 332.5 11 464.0 12 464.0 13 753.0 14 1042.0 15 2542.0 16 4042.0 17 4734.0 18 5426.0 19 5426.0 20 5786.5 21 6147.0 22 7574.5 23 9002.0 24 11749.0 25 14496.0 26 14496.0 27 18912.0 28 23328.0 29 28028.0 30 32728.0 31 38054.5 32 43381.0 33 43381.0 34 49636.0 35 55891.0 36 59872.5 37 63854.0 38 67824.0 39 71794.0 40 71794.0 41 74926.5 42 78059.0 43 78999.0 44 79939.0 45 80876.5 46 81814.0 47 81814.0 48 80692.5 49 79571.0 50 78158.5 51 76746.0 52 83951.0 53 91156.0 54 91156.0 55 75781.0 56 60406.0 57 59712.5 58 59019.0 59 50541.0 60 42063.0 61 42063.0 62 34493.0 63 26923.0 64 22650.0 65 18377.0 66 15168.0 67 11959.0 68 11959.0 69 9727.5 70 7496.0 71 6025.5 72 4555.0 73 3586.0 74 2617.0 75 2617.0 76 1981.5 77 1346.0 78 1084.0 79 822.0 80 635.5 81 449.0 82 449.0 83 329.0 84 209.0 85 155.5 86 102.0 87 70.5 88 39.0 89 39.0 90 28.0 91 17.0 92 12.0 93 7.0 94 3.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1055853.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.06659354254122 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96984444360676 45.065400149810145 2 12.693005784138487 14.486932038331116 3 3.6366642956741093 6.22596129635719 4 1.5569613491728096 3.5540192189876536 5 0.7971147911493328 2.2744312896633314 6 0.48229039899090254 1.6513602101210323 7 0.31402111069789673 1.2544080561581952 8 0.2224401132354033 1.0155119623649285 9 0.18015784059306278 0.9252894836363623 >10 1.0138116078413613 11.059243834741661 >50 0.0909108830313272 3.539691833787422 >100 0.03894905657983986 3.702013374174059 >500 0.0021638360327708734 0.8377829747123783 >1k 9.98693553586557E-4 1.1573183405777345 >5k 4.993467767932785E-4 2.022932427715365 >10k+ 1.664489255977595E-4 1.2277035088613935 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGT 12925 1.2241287376178311 No Hit ATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATG 9578 0.907133852913237 No Hit TCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTT 6352 0.6015988968161288 TruSeq Adapter, Index 7 (95% over 21bp) ACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCC 5367 0.5083093953419653 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2548 0.2413214718336738 No Hit CATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTC 2456 0.23260813768583316 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2335 0.2211482090783471 No Hit CTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGTCTTC 2050 0.19415581525079723 RNA PCR Primer, Index 7 (95% over 22bp) GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1452 0.13751914328983295 No Hit CACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCG 1343 0.1271957365277174 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 9.47101537808767E-5 0.0 5 0.0 0.0 0.0 9.47101537808767E-5 0.0 6 0.0 0.0 0.0 9.47101537808767E-5 0.0 7 0.0 0.0 0.0 9.47101537808767E-5 0.0 8 0.0 0.0 0.0 9.47101537808767E-5 0.0 9 0.0 0.0 0.0 2.8413046134263006E-4 0.0 10 0.0 0.0 0.0 2.8413046134263006E-4 0.0 11 0.0 0.0 0.0 2.8413046134263006E-4 0.0 12 0.0 0.0 0.0 3.788406151235068E-4 0.0 13 0.0 0.0 0.0 3.788406151235068E-4 0.0 14 0.0 0.0 0.0 3.788406151235068E-4 0.0 15 0.0 0.0 0.0 3.788406151235068E-4 0.0 16 0.0 0.0 0.0 4.7355076890438346E-4 0.0 17 0.0 0.0 0.0 5.682609226852601E-4 0.0 18 0.0 0.0 0.0 7.576812302470136E-4 0.0 19 0.0 0.0 0.0 7.576812302470136E-4 0.0 20 0.0 0.0 0.0 7.576812302470136E-4 0.0 21 0.0 0.0 0.0 0.0010418116915896435 0.0 22 0.0 0.0 0.0 0.0016100726142749039 0.0 23 0.0 0.0 0.0 0.0017994929218366571 0.0 24 0.0 0.0 0.0 0.0022730436907410405 0.0 25 0.0 0.0 0.0 0.0023677538445219175 0.0 26 0.0 0.0 0.0 0.002746594459645424 9.47101537808767E-5 27 0.0 0.0 0.0 0.0037884061512350677 9.47101537808767E-5 28 0.0 0.0 0.0 0.00947101537808767 9.47101537808767E-5 29 0.0 0.0 0.0 0.020741523678011995 9.47101537808767E-5 30 0.0 0.0 0.0 0.034853336591362624 9.47101537808767E-5 31 0.0 0.0 0.0 0.07851471748434678 9.47101537808767E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1650 0.0 31.506062 1 TTATACA 1770 0.0 29.474579 2 TATACAC 1885 0.0 28.363396 3 CGTCTTC 300 0.0 27.133333 37 CCGTCTT 1015 0.0 26.97537 37 GCCGTCT 1040 0.0 26.326923 36 GGTATCA 640 0.0 25.4375 1 TTACGGG 115 0.0 24.130436 3 GATTACG 110 3.6379788E-12 23.545454 1 GTATCAA 1735 0.0 22.285303 1 TCGTGCG 45 0.0038256044 20.555557 37 TGCCGTC 1360 0.0 20.404411 35 ATGCCGT 1415 0.0 19.480566 34 TATATCG 50 0.0070345127 18.499998 5 ATACGCC 50 0.0070345127 18.499998 6 TATGCCG 1515 0.0 18.194717 33 TACACAT 3035 0.0 17.616146 5 ATACACA 2975 0.0 17.536135 4 GTACTGG 735 0.0 17.367348 1 TTAACGG 120 1.0409349E-7 16.958332 35 >>END_MODULE