ERR1630861.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630861.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	269673
Sequences flagged as poor quality	0
Sequence length	43
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCTT	6902	2.559396009240821	TruSeq Adapter, Index 11 (95% over 21bp)
ATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATG	6056	2.245682734274473	No Hit
CTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGT	5114	1.8963707898083975	No Hit
ACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCC	3583	1.3286461751825358	No Hit
CTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCTTC	2640	0.9789634112425049	RNA PCR Primer, Index 11 (95% over 22bp)
CATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTC	1930	0.7156815847341039	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1522	0.5643872393602622	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1456	0.5399131540791996	No Hit
CACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCG	920	0.3411539160390547	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	540	0.2002425159359669	No Hit
TTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTA	530	0.19653432119641195	No Hit
ACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGT	484	0.17947662539445922	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	477	0.17688088907677077	No Hit
TATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTAT	461	0.17094777749348283	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA	312	0.1156956758741142	No Hit
TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT	279	0.10345863323358288	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	665	0.0	31.714285	1
CGTCTTC	295	0.0	31.355932	37
TTATACA	710	0.0	29.96479	2
TTGCACG	25	0.005488978	29.6	10
TTGGGCC	25	0.005488978	29.6	4
TATACAC	750	0.0	28.366665	3
CCGTCTT	1015	0.0	25.699507	37
GCCGTCT	1040	0.0	24.903845	36
CGACCTG	45	1.3195461E-4	24.666666	35
GCCGCTA	45	1.3195461E-4	24.666666	37
CGCCGCT	45	1.3195461E-4	24.666666	36
GGTATCA	245	0.0	23.408163	1
TTAAGGG	40	0.0019273767	23.125002	3
CTCGCCG	40	0.0019273767	23.125002	34
GTATCAA	630	0.0	22.611113	1
TGCCGTC	1220	0.0	21.22951	35
GCTGTGG	45	0.0038183315	20.555555	8
GCATATA	45	0.0038183315	20.555555	1
ATGCCGT	1275	0.0	20.313725	34
TCGCCGC	55	5.129075E-4	20.181818	35