##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630854.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 661557 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.259761441568905 31.0 31.0 34.0 28.0 34.0 2 31.267612616902248 31.0 31.0 34.0 28.0 34.0 3 30.712139694689952 31.0 31.0 34.0 26.0 34.0 4 34.908157573723805 37.0 35.0 37.0 32.0 37.0 5 35.0817299189639 37.0 35.0 37.0 32.0 37.0 6 35.27958437443788 37.0 35.0 37.0 32.0 37.0 7 35.27367558653298 37.0 35.0 37.0 32.0 37.0 8 35.3134574949702 37.0 35.0 37.0 32.0 37.0 9 37.05135309580278 39.0 37.0 39.0 33.0 39.0 10 36.87444921601615 39.0 37.0 39.0 33.0 39.0 11 36.9334630273733 39.0 37.0 39.0 33.0 39.0 12 36.86208444623819 39.0 37.0 39.0 33.0 39.0 13 36.94201255522956 39.0 37.0 39.0 33.0 39.0 14 38.000288712839556 40.0 37.0 41.0 33.0 41.0 15 38.02137684281173 40.0 37.0 41.0 33.0 41.0 16 38.01653523430332 40.0 37.0 41.0 33.0 41.0 17 37.97539743363006 40.0 37.0 41.0 33.0 41.0 18 38.05218295626832 40.0 37.0 41.0 33.0 41.0 19 38.051799013539274 40.0 37.0 41.0 33.0 41.0 20 38.007755945443854 40.0 37.0 41.0 33.0 41.0 21 37.98744628202861 40.0 37.0 41.0 33.0 41.0 22 37.90977194708846 40.0 37.0 41.0 33.0 41.0 23 37.909729622693135 40.0 37.0 41.0 33.0 41.0 24 37.868513219571405 40.0 37.0 41.0 33.0 41.0 25 37.791903040856646 39.0 37.0 41.0 33.0 41.0 26 37.667331764307534 39.0 37.0 41.0 32.0 41.0 27 37.577342541912486 39.0 37.0 41.0 32.0 41.0 28 37.58099453259508 39.0 37.0 41.0 32.0 41.0 29 37.56486289163292 39.0 37.0 41.0 32.0 41.0 30 37.419622194308275 39.0 37.0 41.0 32.0 41.0 31 37.41739714038246 39.0 36.0 40.0 32.0 41.0 32 37.331407573345906 39.0 36.0 40.0 32.0 41.0 33 37.27423185001444 39.0 36.0 40.0 31.0 41.0 34 37.23080550882237 39.0 36.0 40.0 31.0 41.0 35 37.22270643345925 39.0 36.0 40.0 31.0 41.0 36 37.16842993120774 39.0 36.0 40.0 31.0 41.0 37 37.125166841254796 39.0 36.0 40.0 31.0 41.0 38 37.081760150674846 39.0 36.0 40.0 31.0 41.0 39 36.9866904892549 39.0 36.0 40.0 31.0 41.0 40 36.89130944121217 39.0 36.0 40.0 31.0 41.0 41 36.855877875980454 39.0 36.0 40.0 30.0 41.0 42 36.8174110469695 39.0 36.0 40.0 30.0 41.0 43 36.089339240609654 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 12.0 10 20.0 11 14.0 12 14.0 13 10.0 14 9.0 15 11.0 16 7.0 17 12.0 18 28.0 19 48.0 20 79.0 21 159.0 22 318.0 23 583.0 24 1146.0 25 1920.0 26 2950.0 27 4486.0 28 6604.0 29 9238.0 30 12772.0 31 16684.0 32 21120.0 33 27753.0 34 36588.0 35 48186.0 36 67146.0 37 98737.0 38 166563.0 39 138336.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.04291542527704 23.03716837702571 15.902333434609565 24.017582763087685 2 13.53609741866536 22.562228198023753 41.05043102861885 22.851243354692038 3 14.76728384704568 28.528909829387338 35.71876648572987 20.985039837837103 4 11.807145869516912 19.495825756510776 36.623601594420435 32.07342677955188 5 12.159798777731927 39.09685786712256 35.1809443479549 13.562399007190612 6 27.160622591855276 39.81924460023853 17.88205702607636 15.138075781829835 7 23.07072557617862 34.812570950046634 22.372221894712023 19.744481579062725 8 24.364642804777215 35.6108392776435 22.473498126389714 17.551019791189574 9 22.908834764049054 15.428753682600291 19.232205237039288 42.43020631631137 10 13.803799219114907 29.161810698095554 33.57352427681968 23.460865805969856 11 30.103830811252845 23.066644295200565 25.65281600829558 21.176708885251006 12 19.283901462761335 27.369221397400374 28.789507177763973 24.55736996207432 13 28.313508888878815 20.750441760876235 27.592784899865013 23.343264450379937 14 21.225230781323454 23.44816848737146 26.30143736669705 29.025163364608037 15 23.964223793263468 29.102103068972134 23.20072193325745 23.732951204506943 16 24.660762413518412 28.248813027448882 22.991367334938637 24.09905722409407 17 20.58991137573935 31.557371473659867 24.619647286628364 23.233069863972418 18 23.312730422321888 26.0623045330939 25.84901981235177 24.775945232232445 19 24.959754034799722 27.703432961936763 26.577301729102707 20.759511274160804 20 22.260818039866557 26.23734613948609 27.9492167719486 23.55261904869875 21 24.348166522310247 27.83781291710314 25.132074787206545 22.681945773380072 22 21.688531751610217 31.78788826964268 25.784323950921838 20.739256027825267 23 22.805139995495473 28.321369133725437 25.83072962722789 23.042761243551197 24 27.091996608002034 27.740013332184528 25.42532238340763 19.742667676405812 25 23.351275853781306 28.43020329314027 26.502780561614493 21.715740291463923 26 25.03291477529525 29.163322283642984 25.247711081584807 20.556051859476963 27 22.29528219034792 29.200809605219202 28.037191050808925 20.46671715362395 28 19.97620764348348 29.30027193423998 27.75059443101653 22.972925991260013 29 25.702396014251228 26.676915216678232 25.907064697373016 21.713624071697527 30 20.937122575983626 28.732973878290153 29.66955228347671 20.66035126224951 31 23.81835578793664 28.645453075094057 25.532644957275036 22.00354617969427 32 25.628328322427247 26.748715530181073 27.22350455062829 20.39945159676339 33 20.51962264778394 29.703714116848584 28.939758781178345 20.83690445418913 34 22.342745976537167 29.361339990356083 26.329250540769728 21.966663492337016 35 23.05364465949268 26.24807839687283 30.450286218723406 20.24799072491108 36 22.520659595469475 28.41705249887765 25.104261613133865 23.958026292519012 37 22.4095580577335 26.693391499145196 27.873335177467702 23.023715265653603 38 22.18236674995503 25.232292909001035 28.47116726147558 24.114173079568353 39 24.388677014981326 25.880763108847766 26.85135218885145 22.87920768731946 40 20.74741858978138 24.877070305355396 32.23592222590042 22.139588878962808 41 21.91058366852743 26.785295900428835 26.72347205153902 24.580648379504712 42 22.7593389534084 24.89853482012888 30.3397893152064 22.00233691125632 43 22.33594384157374 24.846989752961573 29.910952495401 22.906113910063684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 14.5 2 23.0 3 71.0 4 119.0 5 119.0 6 170.5 7 222.0 8 219.0 9 216.0 10 369.5 11 523.0 12 523.0 13 735.5 14 948.0 15 2553.0 16 4158.0 17 4522.0 18 4886.0 19 4886.0 20 5330.0 21 5774.0 22 7232.5 23 8691.0 24 10718.0 25 12745.0 26 12745.0 27 14789.5 28 16834.0 29 21354.0 30 25874.0 31 27465.0 32 29056.0 33 29056.0 34 31307.5 35 33559.0 36 35338.0 37 37117.0 38 40168.5 39 43220.0 40 43220.0 41 45946.5 42 48673.0 43 45054.0 44 41435.0 45 42666.0 46 43897.0 47 43897.0 48 45754.5 49 47612.0 50 59437.0 51 71262.0 52 59578.5 53 47895.0 54 47895.0 55 49885.0 56 51875.0 57 43083.5 58 34292.0 59 25490.0 60 16688.0 61 16688.0 62 14378.0 63 12068.0 64 10161.5 65 8255.0 66 6895.5 67 5536.0 68 5536.0 69 4475.5 70 3415.0 71 2805.0 72 2195.0 73 1734.5 74 1274.0 75 1274.0 76 928.5 77 583.0 78 475.5 79 368.0 80 258.0 81 148.0 82 148.0 83 102.5 84 57.0 85 46.0 86 35.0 87 25.5 88 16.0 89 16.0 90 10.5 91 5.0 92 3.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 661557.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.845021644492704 #Duplication Level Percentage of deduplicated Percentage of total 1 82.38335325153841 37.76866612962667 2 10.325992684983744 9.46790716287906 3 2.8103576431904767 3.8652272094249875 4 1.1899740551741553 2.1821754526337562 5 0.6674992127103182 1.530075792719319 6 0.41573629314546207 1.1435663614592924 7 0.2867296418124467 0.9201588644506481 8 0.20487352975484843 0.7513945124795718 9 0.17890359226394684 0.7381655153656326 >10 1.2152642298552843 10.96707398165795 >50 0.1616516940078603 5.198278200565863 >100 0.1457515259081707 13.015589483892454 >500 0.008612590167300992 2.7797044537508158 >1k 0.003975041615677381 3.23985002274475 >5k 3.312534679731151E-4 0.9965264764812529 >10k+ 9.937604039193452E-4 5.43564037986795 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGT 12267 1.8542619910302514 No Hit ATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATG 11944 1.8054377778483184 No Hit TCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTT 11582 1.750718381031415 TruSeq Adapter, Index 3 (95% over 21bp) ACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCC 6562 0.9919024362224268 No Hit CTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTCTTC 4441 0.671295141612892 RNA PCR Primer, Index 3 (95% over 22bp) CATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGTC 3226 0.4876374976003579 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2112 0.31924686761684934 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2071 0.31304936687239343 No Hit CACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCG 1616 0.24427222446440747 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT 1387 0.2096569154283002 No Hit GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATC 1251 0.18909935198327582 No Hit GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAAC 1087 0.1643093490054523 No Hit GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG 1050 0.15871648247996772 No Hit TTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTA 1046 0.1581118482609964 No Hit GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC 1024 0.15478636005665422 No Hit ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGT 1023 0.1546352015019114 No Hit GTTATTTCCTGTCAGTGATTTTGGTCTGAATCAACCAGTTTAT 974 0.1472284323195129 No Hit ATTGAAAGCTGAGTATTTTTAAGACAAAGGTTTCAGGAAGAAA 959 0.1449610539983705 No Hit TATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTAT 951 0.1437517855604279 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 917 0.1386123946991718 No Hit CTCTTCACCTGCTCTGTTCTACAGCACACTACCAGAAGACAGC 871 0.13165910118100177 No Hit ACTTTATTCCATTTGTAATTTTTGGCTACACAACACTAAAAGA 830 0.1254616004365459 No Hit ACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGTATGCCGT 828 0.12515928332706025 No Hit CTACCAGAAGACAGCAGAAATGAAAAGCATTTACTTTGTGGCT 827 0.12500812477231743 No Hit TCCCAGAAGAGGTCGCCATTGTTGAAGAACTTGGCCGCAGACA 820 0.12395001488911764 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 752 0.11367123316660545 No Hit ATTCAAGATCATCTTCACAACATCACCTGCTAGCCACGTGGGA 742 0.11215964761917718 No Hit GGAATAACATTGCCAAACGTCACGATGAATTTGAGAGACATGC 686 0.1036947685535789 No Hit CTATATCACTATTCAAGATCATCTTCACAACATCACCTGCTAG 678 0.10248550011563629 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.511585547428264E-4 0.0 12 0.0 0.0 0.0 1.511585547428264E-4 0.0 13 0.0 1.511585547428264E-4 0.0 1.511585547428264E-4 0.0 14 0.0 1.511585547428264E-4 0.0 1.511585547428264E-4 0.0 15 0.0 3.023171094856528E-4 0.0 1.511585547428264E-4 0.0 16 0.0 3.023171094856528E-4 0.0 3.023171094856528E-4 0.0 17 0.0 3.023171094856528E-4 0.0 3.023171094856528E-4 0.0 18 0.0 3.023171094856528E-4 0.0 3.023171094856528E-4 0.0 19 0.0 3.023171094856528E-4 0.0 6.046342189713056E-4 0.0 20 0.0 3.023171094856528E-4 0.0 6.046342189713056E-4 0.0 21 0.0 3.023171094856528E-4 0.0 0.001209268437942611 0.0 22 0.0 3.023171094856528E-4 0.0 0.001511585547428264 0.0 23 0.0 3.023171094856528E-4 0.0 0.0021162197663995696 0.0 24 0.0 3.023171094856528E-4 0.0 0.003023171094856528 0.0 25 0.0 3.023171094856528E-4 0.0 0.0033254882043421805 0.0 26 0.0 3.023171094856528E-4 0.0 0.0036278053138278335 0.0 27 0.0 3.023171094856528E-4 0.0 0.004081280978056313 0.0 28 0.0 3.023171094856528E-4 0.0 0.008616037620341105 0.0 29 0.0 3.023171094856528E-4 0.0 0.017534392350167863 0.0 30 0.0 3.023171094856528E-4 0.0 0.029475918174851148 0.0 31 0.0 3.023171094856528E-4 0.0 0.06333543443724426 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATTACG 65 0.0 37.0 1 CTTATAC 1455 0.0 32.804123 1 CGTCTTC 545 0.0 30.550459 37 GGTACGA 25 0.0054946775 29.6 31 TTATACA 1650 0.0 28.927273 2 TTACGGG 90 0.0 28.777779 3 TATACAC 1665 0.0 28.777779 3 GGTATCA 335 0.0 28.16418 1 CCGTCTT 1600 0.0 25.090626 37 GCCGTCT 1600 0.0 25.090626 36 ATTACGG 100 2.0008883E-11 24.050001 2 GTATCAA 965 0.0 23.196892 1 CGGTTTG 40 0.0019303259 23.125 23 TGCCGTC 1905 0.0 20.976377 35 CCTACGA 45 0.0038241162 20.555557 2 CTCGAAA 45 0.0038241162 20.555557 28 ATGCCGT 2005 0.0 20.022444 34 CTTAATA 60 9.2311675E-4 18.5 2 GTTTAGG 70 1.2182051E-4 18.5 1 TATGCCG 2190 0.0 18.5 33 >>END_MODULE