##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630845.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 443984 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46917906951602 31.0 31.0 34.0 28.0 34.0 2 31.472377382968755 31.0 31.0 34.0 28.0 34.0 3 30.954782154311868 31.0 31.0 34.0 27.0 34.0 4 35.08931402933439 37.0 35.0 37.0 32.0 37.0 5 35.28278271289055 37.0 35.0 37.0 33.0 37.0 6 35.48276964935673 37.0 35.0 37.0 33.0 37.0 7 35.4780329921799 37.0 35.0 37.0 33.0 37.0 8 35.50024775667592 37.0 35.0 37.0 33.0 37.0 9 37.27536127428015 39.0 37.0 39.0 34.0 39.0 10 37.10431456989441 39.0 37.0 39.0 33.0 39.0 11 37.15500333345346 39.0 37.0 39.0 33.0 39.0 12 37.0717953800137 39.0 37.0 39.0 33.0 39.0 13 37.15416096075534 39.0 37.0 39.0 33.0 39.0 14 38.277904158708424 40.0 38.0 41.0 33.0 41.0 15 38.2757937222963 40.0 38.0 41.0 33.0 41.0 16 38.28355526325273 40.0 38.0 41.0 33.0 41.0 17 38.27059758910231 40.0 38.0 41.0 33.0 41.0 18 38.316531676817185 40.0 38.0 41.0 33.0 41.0 19 38.351598255793 40.0 38.0 41.0 34.0 41.0 20 38.333180925438754 40.0 38.0 41.0 34.0 41.0 21 38.305389383401206 40.0 38.0 41.0 34.0 41.0 22 38.21602580273163 40.0 38.0 41.0 34.0 41.0 23 38.22384139969008 40.0 38.0 41.0 34.0 41.0 24 38.1691660059822 40.0 38.0 41.0 33.0 41.0 25 38.131675916249236 40.0 37.0 41.0 33.0 41.0 26 38.05565515874446 40.0 37.0 41.0 33.0 41.0 27 37.96607310173339 40.0 37.0 41.0 33.0 41.0 28 37.96560686871599 40.0 37.0 41.0 33.0 41.0 29 37.885779667735775 40.0 37.0 41.0 33.0 41.0 30 37.77910465241991 40.0 37.0 41.0 33.0 41.0 31 37.74086678799236 40.0 37.0 41.0 33.0 41.0 32 37.623049479260516 40.0 37.0 41.0 32.0 41.0 33 37.591052830732636 40.0 37.0 41.0 32.0 41.0 34 37.511966647446755 40.0 36.0 41.0 32.0 41.0 35 37.47529415474432 40.0 36.0 41.0 32.0 41.0 36 37.44459485026488 40.0 36.0 41.0 32.0 41.0 37 37.36537352697395 39.0 36.0 41.0 32.0 41.0 38 37.323335976071206 39.0 36.0 41.0 32.0 41.0 39 37.20798272009802 39.0 36.0 41.0 31.0 41.0 40 37.08697835958053 39.0 36.0 41.0 31.0 41.0 41 37.02442655591192 39.0 36.0 41.0 31.0 41.0 42 36.947088183357955 39.0 36.0 41.0 31.0 41.0 43 36.283602562254494 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 9.0 11 13.0 12 20.0 13 4.0 14 9.0 15 11.0 16 8.0 17 6.0 18 9.0 19 24.0 20 38.0 21 80.0 22 177.0 23 357.0 24 582.0 25 1062.0 26 1649.0 27 2644.0 28 3879.0 29 5522.0 30 7717.0 31 10053.0 32 13078.0 33 17060.0 34 21978.0 35 29906.0 36 41426.0 37 60826.0 38 103455.0 39 122372.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.238990594255654 23.165249198169303 15.335237305848858 23.260522901726187 2 13.693511477891096 22.669961079678547 41.436853580309204 22.19967386212116 3 14.621923312551804 29.33461566182565 33.98140473530577 22.062056290316768 4 10.868860139104111 19.434484125554075 38.04686655374969 31.64978918159213 5 12.289406825471188 38.42007820101625 35.4274027892897 13.863112184222857 6 27.042866409600347 40.423754009153484 17.717530361454468 14.815849219791705 7 24.597733251648705 33.24106274099968 22.429411870698043 19.731792136653574 8 24.77319002486576 34.70372806227252 22.589552776676637 17.93352913618509 9 23.44476377527118 14.758414717647483 19.84823777433421 41.948583732747124 10 14.336552668564634 28.96433204800173 33.70346679159609 22.995648491837546 11 31.423429673141374 23.673150383797616 24.786028325345058 20.117391617715956 12 20.67777217197016 26.474152221701686 29.59768820498036 23.250387401347798 13 29.17492522253054 21.185222890914986 26.698034163393274 22.941817723161193 14 21.526451403654185 22.699691880788496 26.971242206926377 28.802614508630942 15 23.49206277703701 29.161636455367763 23.70107931817363 23.645221449421598 16 24.349526109048973 27.659780532631807 23.471116076255 24.519577282064215 17 21.19625932466035 30.10356229053299 24.952926231575912 23.747252153230747 18 23.254441601499153 24.981981332660634 27.320128653284804 24.44344841255541 19 23.915276226170313 27.67870013333814 27.633878698331472 20.77214494216008 20 22.290668132184944 27.555722728746986 26.070083606616457 24.08352553245162 21 24.397050344156547 25.61105805614617 26.509288623013443 23.482602976683843 22 22.563650942376302 29.8528775811741 26.593075426141482 20.990396050308117 23 22.433240837507658 25.193024973872934 27.61090489747378 24.76282929114563 24 23.128310930123607 27.882536307614693 28.221287253594724 20.76786550866698 25 22.271973764820356 28.60395870121446 26.41874481963314 22.70532271433205 26 23.622472881905654 25.752729828101913 27.9699268442106 22.65487044578183 27 22.301028865905078 30.111895924177446 26.33090381635374 21.256171393563733 28 20.44623229665934 25.165771739522146 28.656438069840355 25.731557893978163 29 23.345435871562938 26.074137806767812 29.34903059569714 21.231395725972106 30 21.953268586255362 27.454818191646545 27.769919636743666 22.821993585354427 31 22.07309272406213 24.64660888680673 28.011144545749396 25.26915384338174 32 25.07049803596526 26.134500342354677 27.515631193916896 21.279370427763165 33 20.73498144077264 25.022973800857688 29.184159789541965 25.057884968827704 34 21.309326462214855 27.854607373238675 29.167492522253053 21.668573642293413 35 22.908032721899886 25.891924033298498 30.4983963386068 20.701646906194817 36 22.487747306209233 25.642590723990054 25.850706331759703 26.018955638041007 37 21.95642185303975 26.874617103319036 28.938880680384877 22.230080363256334 38 21.598751306353382 24.824543226782946 28.728287505856066 24.848417961007605 39 23.834867923168403 25.67502432520091 27.536352661357167 22.95375509027352 40 21.260901293740314 25.343255612814875 31.844165555515513 21.551677537929294 41 22.544731341669973 26.462665321272837 26.514018523190025 24.478584813867165 42 22.07759739089697 26.091706007423692 29.875400915348298 21.955295686331038 43 23.544316912321165 24.427231611949978 28.98663014883419 23.041821326894663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 8.0 2 14.0 3 55.0 4 96.0 5 96.0 6 152.5 7 209.0 8 215.0 9 221.0 10 342.5 11 464.0 12 464.0 13 656.0 14 848.0 15 2230.5 16 3613.0 17 4007.5 18 4402.0 19 4402.0 20 4321.0 21 4240.0 22 4956.0 23 5672.0 24 6952.0 25 8232.0 26 8232.0 27 9717.5 28 11203.0 29 12912.5 30 14622.0 31 16608.5 32 18595.0 33 18595.0 34 22263.0 35 25931.0 36 26675.0 37 27419.0 38 27588.0 39 27757.0 40 27757.0 41 27755.5 42 27754.0 43 28354.0 44 28954.0 45 28916.5 46 28879.0 47 28879.0 48 28865.5 49 28852.0 50 29117.0 51 29382.0 52 36663.0 53 43944.0 54 43944.0 55 35091.0 56 26238.0 57 27902.5 58 29567.0 59 24468.5 60 19370.0 61 19370.0 62 14840.0 63 10310.0 64 7991.5 65 5673.0 66 4777.0 67 3881.0 68 3881.0 69 3238.5 70 2596.0 71 2557.0 72 2518.0 73 2179.0 74 1840.0 75 1840.0 76 1097.0 77 354.0 78 247.5 79 141.0 80 114.0 81 87.0 82 87.0 83 73.5 84 60.0 85 40.5 86 21.0 87 18.0 88 15.0 89 15.0 90 10.0 91 5.0 92 3.0 93 1.0 94 1.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 443984.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.09868465606017 #Duplication Level Percentage of deduplicated Percentage of total 1 85.07083651272218 47.723620309544515 2 9.181558592611484 10.301467202761026 3 2.2342776614126727 3.7602011388500736 4 0.912862745462235 2.04841597167805 5 0.5231933355329661 1.4675228972108072 6 0.33419830441043913 1.1248851175026735 7 0.24480465089346384 0.9613253238966529 8 0.19155549475803307 0.8596809035653188 9 0.14095369867535484 0.7116585383784653 >10 0.9929478083194705 10.952857426721721 >50 0.10271994120469355 4.017447055457345 >100 0.06163196472151729 6.164243490663449 >500 0.004431056287167909 1.620266362198729 >1k 0.002819763091834124 3.467641189391841 >5k 0.0012084698965003388 4.818767072179316 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGT 7815 1.7601985657140797 No Hit ATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATG 7813 1.7597480990305958 No Hit TCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTT 5696 1.2829291145626869 Illumina PCR Primer Index 11 (95% over 22bp) ACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCC 4281 0.9642239359976936 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2380 0.5360553533460665 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2254 0.5076759522865689 No Hit CATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTC 2089 0.4705124508991315 No Hit CTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGTCTTC 1845 0.4155555155140726 Illumina PCR Primer Index 11 (95% over 23bp) GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG 1387 0.3123986449962161 No Hit CACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCG 1109 0.24978377599192766 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 964 0.21712494143933114 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 816 0.18379040686150852 No Hit ATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAA 789 0.1777091066344733 No Hit TTATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTA 689 0.15518577246026885 No Hit GTATTTACAGTTTTCAGTTTCTAATGCAAGGGTCTCGCTGAAG 668 0.1504558722836859 No Hit ACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTATGCCGT 580 0.13063533821038595 No Hit TATACACATCTCCGAGCCCACGAGACTACGCTGCATCTCGTAT 571 0.12860823813470754 No Hit GGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTC 552 0.12432880464160871 No Hit ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA 524 0.11802227107283146 No Hit GTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAG 509 0.11464377094670078 No Hit ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAA 508 0.11441853760495874 No Hit TATTCAGACAGGATACCACGTGTCCCGCCCTACTCATCGAGCT 491 0.11058957079534398 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 4.5046668348408954E-4 0.0 17 0.0 0.0 0.0 6.757000252261342E-4 0.0 18 0.0 0.0 0.0 6.757000252261342E-4 0.0 19 0.0 0.0 0.0 9.009333669681791E-4 0.0 20 0.0 0.0 0.0 0.0013514000504522684 0.0 21 0.0 0.0 0.0 0.0024775667591624925 0.0 22 0.0 0.0 0.0 0.0031532667843886266 0.0 23 0.0 0.0 0.0 0.004504666834840895 0.0 24 0.0 0.0 0.0 0.004955133518324985 0.0 25 0.0 0.0 0.0 0.004955133518324985 0.0 26 0.0 0.0 0.0 0.005180366860067029 0.0 27 0.0 0.0 0.0 0.0058560668852931635 0.0 28 0.0 0.0 0.0 0.010811200403618148 0.0 29 0.0 0.0 0.0 0.020946700782010164 0.0 30 0.0 0.0 0.0 0.035136401311758984 0.0 31 0.0 0.0 0.0 0.06959710259829183 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGGG 45 2.6120688E-9 37.0 3 CGTCTTC 295 0.0 33.864407 37 GATTACG 45 1.0774238E-7 32.88889 1 CTTATAC 955 0.0 32.157066 1 GCCTACC 30 3.5959514E-4 30.833334 1 TATACAC 1075 0.0 29.255816 3 TTATACA 1090 0.0 28.85321 2 GGTATCA 305 0.0 27.90164 1 GTATCAA 970 0.0 25.36598 1 CCGTCTT 920 0.0 24.331522 37 GCCGTCT 965 0.0 23.196892 36 ATTACCC 80 2.7162969E-8 23.125 3 CGCAAGT 40 0.0019293305 23.125 12 ATTACGG 75 3.7300742E-7 22.2 2 CGGAGTT 50 2.6984836E-4 22.2 24 ATTACCG 60 3.7196583E-5 21.583334 5 GCACGGA 60 3.7196583E-5 21.583334 21 TTACCGC 60 3.7196583E-5 21.583334 6 ATAGCGG 70 5.0902927E-6 21.142857 7 TCGGGAT 70 5.0902927E-6 21.142857 22 >>END_MODULE