FastQCFastQC Report
Fri 10 Feb 2017
ERR1630840.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630840.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1494
Sequences flagged as poor quality0
Sequence length43
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT151.0040160642570282No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT151.0040160642570282No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT80.535475234270415No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.33467202141900937No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT30.2008032128514056No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.2008032128514056No Hit
CTGTAGAACAGAGCAGGTGAAGAGAGAGCAAGCCCTCTTTGGG30.2008032128514056No Hit
GTGCTGTAGAACAGAGCAGGTGAAGAGAGAGCAAGCCCTCTTT20.13386880856760375No Hit
GGTCTTGGGTGTGTAGAAGAAGCCTCGTTCCCCGCACACTAGG20.13386880856760375No Hit
GTGCAGGAGGCGGCGGGTGGGGGGCTGCCTGCGGGCTGCGTCT20.13386880856760375No Hit
GGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA20.13386880856760375No Hit
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC20.13386880856760375No Hit
TGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTG20.13386880856760375No Hit
GTACATGGGAAGCAGAGGTATCAACGCAAAAAAAAAAAAAAAA20.13386880856760375No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA20.13386880856760375No Hit
ACACTAAAAGAAAATTTATTTATTGGCATGCAAAGCAATGTGG20.13386880856760375No Hit
GAGTATAGTAGTTCGCTTTGACTGGTGAAGTCTTAGCATGTAC20.13386880856760375No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA20.13386880856760375No Hit
CTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTA20.13386880856760375No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG20.13386880856760375No Hit
GTGCTAGATTCTGTTATTTTCTTCTTATTTTGGATGAAGTACC20.13386880856760375No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.13386880856760375No Hit
GCTGCATACTGGGCCATCTGCTCTGGTGTGGCATTGTCCCCTG20.13386880856760375No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC20.13386880856760375No Hit
GTATAGTAGTTCGCTTTGACTGGTGAAGTCTTAGCATGTACTG20.13386880856760375No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.13386880856760375No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.13386880856760375No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.13386880856760375No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)