##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630839.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2045767 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07978621221283 33.0 31.0 34.0 30.0 34.0 2 32.25098997099865 33.0 31.0 34.0 30.0 34.0 3 32.370830109196206 34.0 31.0 34.0 30.0 34.0 4 35.950349673252134 37.0 35.0 37.0 35.0 37.0 5 35.911679580323664 37.0 35.0 37.0 35.0 37.0 6 35.98263047551359 37.0 35.0 37.0 35.0 37.0 7 35.91943852843457 37.0 35.0 37.0 35.0 37.0 8 35.919806116727855 37.0 35.0 37.0 35.0 37.0 9 37.660211549018044 39.0 37.0 39.0 35.0 39.0 10 37.571176971766576 39.0 37.0 39.0 35.0 39.0 11 37.661543567767005 39.0 37.0 39.0 35.0 39.0 12 37.57558803128607 39.0 37.0 39.0 35.0 39.0 13 37.63871741014495 39.0 37.0 39.0 35.0 39.0 14 38.94932756271853 40.0 38.0 41.0 36.0 41.0 15 38.96151467884661 40.0 38.0 41.0 36.0 41.0 16 38.93639647134791 40.0 38.0 41.0 36.0 41.0 17 38.897046926653914 40.0 38.0 41.0 35.0 41.0 18 38.88943266755207 40.0 38.0 41.0 35.0 41.0 19 38.95174621547811 40.0 38.0 41.0 35.0 41.0 20 38.92025435936742 40.0 38.0 41.0 35.0 41.0 21 38.880506431084285 40.0 38.0 41.0 35.0 41.0 22 38.81588128071281 40.0 38.0 41.0 35.0 41.0 23 38.78034497574748 40.0 38.0 41.0 35.0 41.0 24 38.73059444208456 40.0 38.0 41.0 35.0 41.0 25 38.68097930996052 40.0 38.0 41.0 34.0 41.0 26 38.55565858673055 40.0 38.0 41.0 34.0 41.0 27 38.43426646338513 40.0 38.0 41.0 34.0 41.0 28 38.350920217209485 40.0 38.0 41.0 34.0 41.0 29 38.27027760248357 40.0 38.0 41.0 34.0 41.0 30 38.18005325142111 40.0 38.0 41.0 34.0 41.0 31 38.10524903373649 40.0 37.0 41.0 33.0 41.0 32 38.02252260399156 40.0 37.0 41.0 33.0 41.0 33 37.94299888501477 40.0 37.0 41.0 33.0 41.0 34 37.855035299718885 40.0 37.0 41.0 33.0 41.0 35 37.800400534371704 40.0 37.0 41.0 33.0 41.0 36 37.746391451225875 40.0 37.0 41.0 33.0 41.0 37 37.59879106467159 40.0 37.0 41.0 33.0 41.0 38 37.47911272398078 40.0 36.0 41.0 32.0 41.0 39 37.397704137372436 40.0 36.0 41.0 32.0 41.0 40 37.22016094697001 40.0 36.0 41.0 31.0 41.0 41 37.146080174330706 40.0 36.0 41.0 31.0 41.0 42 37.01385592787448 39.0 36.0 41.0 31.0 41.0 43 36.22176425761096 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 9.0 10 12.0 11 4.0 12 5.0 13 5.0 14 5.0 15 4.0 16 4.0 17 19.0 18 41.0 19 91.0 20 185.0 21 369.0 22 741.0 23 1383.0 24 2412.0 25 3890.0 26 6273.0 27 9301.0 28 13959.0 29 19999.0 30 27480.0 31 35882.0 32 47171.0 33 60309.0 34 79193.0 35 108176.0 36 155717.0 37 249935.0 38 447165.0 39 776026.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.659451931720476 18.50088499814495 11.20411073206284 24.635552338071737 2 18.66722847714329 20.706316995043913 35.02911133086026 25.597343196952536 3 20.507320726162853 22.32140805868899 28.66861182138533 28.50265939376283 4 13.253659874267207 15.299542909823064 34.203748520725966 37.24304869518376 5 14.952338169498287 36.656031698624524 33.5199463086461 14.871683823231091 6 36.10274288323157 34.17050915377949 15.71219987417922 14.014548088809722 7 30.92752009393054 29.66916564789636 20.350118073074793 19.053196185098304 8 27.83938737891461 33.07981798513712 19.825229363852287 19.255565272095993 9 26.664620164466434 12.600261906658968 19.57842706427467 41.15669086459992 10 16.676630329846947 26.6428190502633 33.160814501358175 23.519736118531583 11 36.44862782516288 21.560519844146476 20.760086559222042 21.230765771468597 12 21.937835540411005 24.921997470875226 28.976906949813934 24.163260038899836 13 30.683112984029954 19.39546390180309 25.260843488041406 24.660579626125557 14 23.24854198938589 20.42373349457685 25.346337095084632 30.981387420952633 15 25.110630878296504 27.576845261459393 23.250888297640934 24.061635562603172 16 26.478675235254062 25.494154515152506 23.76761380939276 24.25955644020067 17 23.939432007652876 26.005258663376623 25.01848939786398 25.036819931106525 18 23.211098820149118 24.354093110310217 27.525715294068192 24.909092775472473 19 25.575542082749404 25.337587320550192 26.302946523235537 22.783924073464867 20 25.4155043071865 24.70672368847479 26.3851650750061 23.49260692933262 21 24.70418185453182 25.015507631123192 25.91722322239043 24.363087291954557 22 25.824250757784245 23.91596892510242 25.993331596413473 24.266448720699866 23 23.150388094049813 24.846866725291786 26.700841298153698 25.301903882504707 24 24.14400075863967 25.648913097141563 25.86335589536834 24.34373024885043 25 24.21854492715935 25.215188239911974 26.29209484755595 24.27417198537272 26 25.314906340751413 25.33802725334801 25.147194181937632 24.19987222396294 27 25.109164435637098 24.870085400732343 24.958267485984475 25.062482677646088 28 24.093115198358365 25.327371103356345 26.34762414292537 24.23188955535992 29 24.39378482495807 25.888187657734242 26.720491629789706 22.997535887517984 30 24.412701935264376 25.13033009135449 25.57348906302624 24.883478910354896 31 23.45990525802792 24.82418574549301 26.371429395429686 25.344479601049386 32 23.004868100815003 25.590988612095124 26.13679856992512 25.267344717164757 33 23.789023872220053 24.46730248361617 26.591493557184176 25.1521800869796 34 24.923268387846708 24.892375329155275 26.684270496102442 23.500085786895575 35 24.799109576017212 24.800136085878794 25.77610255713383 24.62465178097017 36 23.362973398241344 25.02406187996971 25.372342011578052 26.240622710210886 37 23.47672046718908 24.419007638699814 27.682624658624373 24.42164723548674 38 23.14139391240547 23.69688239178753 26.862687686329874 26.299036009477128 39 22.90099507910725 24.71708654993457 28.075777935610457 24.30614043534772 40 23.943195877145346 23.96152641038789 27.48445937391697 24.610818338549795 41 22.153695899875206 24.73761674716622 28.239432936399893 24.86925441655868 42 22.169044666376962 25.513022744036835 27.768607079887396 24.549325509698807 43 22.795851140428017 23.58597044531464 27.473509935393427 26.14466847886392 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 208.0 1 235.5 2 263.0 3 892.5 4 1522.0 5 1522.0 6 2187.5 7 2853.0 8 2824.5 9 2796.0 10 3813.5 11 4831.0 12 4831.0 13 7890.5 14 10950.0 15 15515.5 16 20081.0 17 19040.0 18 17999.0 19 17999.0 20 20326.5 21 22654.0 22 21424.0 23 20194.0 24 23031.5 25 25869.0 26 25869.0 27 28614.0 28 31359.0 29 35719.5 30 40080.0 31 45772.5 32 51465.0 33 51465.0 34 65568.5 35 79672.0 36 85407.0 37 91142.0 38 93503.0 39 95864.0 40 95864.0 41 99047.5 42 102231.0 43 110267.5 44 118304.0 45 117101.5 46 115899.0 47 115899.0 48 117359.5 49 118820.0 50 125489.5 51 132159.0 52 144291.5 53 156424.0 54 156424.0 55 155640.5 56 154857.0 57 141068.5 58 127280.0 59 125660.0 60 124040.0 61 124040.0 62 116264.0 63 108488.0 64 88416.0 65 68344.0 66 61654.0 67 54964.0 68 54964.0 69 49697.5 70 44431.0 71 45327.0 72 46223.0 73 40282.0 74 34341.0 75 34341.0 76 20952.5 77 7564.0 78 6241.0 79 4918.0 80 3964.5 81 3011.0 82 3011.0 83 2287.0 84 1563.0 85 1305.5 86 1048.0 87 871.0 88 694.0 89 694.0 90 505.5 91 317.0 92 174.5 93 32.0 94 21.5 95 11.0 96 11.0 97 6.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2045767.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.862822418012236 #Duplication Level Percentage of deduplicated Percentage of total 1 86.68569974374857 44.95765051991161 2 8.461700728578093 8.776953644812206 3 1.9491643218750057 3.0326748926678597 4 0.7743861641254411 1.606474084520137 5 0.43468383095045343 1.127196516628231 6 0.25950290468668524 0.8075131837634346 7 0.18770136103705282 0.6814305648558711 8 0.12805727938742195 0.5313129552162914 9 0.10359925689217436 0.48356548765531826 >10 0.7906267677393111 8.296804265460297 >50 0.10775731066273715 3.930830456762934 >100 0.0934510607444083 9.802306090180121 >500 0.013349468039068765 5.046626423923936 >1k 0.009941093220583123 9.53702306978048 >5k 3.787083131650713E-4 1.3816378438612513 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8767 0.42854342649969424 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7704 0.3765824749348288 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6420 0.31381872911235736 No Hit GATATGGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAG 5247 0.256480821129679 No Hit GCCCAGGGCCAGGACGATGGACAGCGCAGCCAGCGCGCACTGG 4877 0.23839469499703533 No Hit GCCTGGGACAGATCTTCAGGTTCCAGGGCATCATTCTCCGTCT 4716 0.23052478605823634 No Hit GTCCCAGGCTGCTGAGCAGGATGAAATGAGGCTTGAGCTGCAG 4599 0.22480565968656255 No Hit GTCTGAACCCAACCAGACGGAGAATGATGCCCTGGAACCTGAA 4021 0.19655219778205438 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3997 0.19537904365453154 No Hit GTCCATATCAGACCTCTGATCCCTCGCCCCCACACCCCATCTC 3939 0.1925439211796847 No Hit GCCCTGGGCTGTGTCACCGGCGCTCCCTCGGACCCCAGACTCC 3562 0.1741156250931802 No Hit GGATGAAATGAGGCTTGAGCTGCAGAGATCTGCTAACTCAAAC 3435 0.16790768450170523 No Hit AGCTAACAGGATGTGAAAGTCTTCCAGAAGAAATTCTTGCAGC 3186 0.15573621042865587 No Hit GGTTCAGACAGCAGCTCTGCCAAGAAGTACTTGGCCAGTTCCT 3017 0.1474752501140159 No Hit AGCAGGAACTGGCCAAGTACTTCTTGGCAGAGCTGCTGTCTGA 2975 0.14542223039085098 No Hit GCCAAGAAGTACTTGGCCAGTTCCTGCTTCCCCGCGGCAGCAG 2961 0.1447378904831293 No Hit CTTCTTGGCAGAGCTGCTGTCTGAACCCAACCAGACGGAGAAT 2911 0.14229381938412342 No Hit ACGATGGACAGCGCAGCCAGCGCGCACTGGAGGCGGCAGGACA 2727 0.1332996377397817 No Hit GGCCAGGACGATGGACAGCGCAGCCAGCGCGCACTGGAGGCGG 2632 0.12865590265167048 No Hit ATTTCATCCTGCTCAGCAGCCTGGGACAGATCTTCAGGTTCCA 2624 0.12826485127582957 No Hit GTTCCTGCTTCCCCGCGGCAGCAGCCAGGGACTTCTGCAGAAA 2574 0.12582078017682366 No Hit GTCCATCGTCCTGGCCCTGGGCTGTGTCACCGGCGCTCCCTCG 2559 0.1250875588471219 No Hit GGACAATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTC 2526 0.123474471921778 No Hit GTCCTGGCCCTGGGCTGTGTCACCGGCGCTCCCTCGGACCCCA 2479 0.12117704508871245 No Hit GGATGTGAAAGTCTTCCAGAAGAAATTCTTGCAGCCAGCTTTG 2384 0.11653331000060123 No Hit GTATTTACAGTTTTCAGTTTCTAATGCAAGGGTCTCGCTGAAG 2383 0.11648442857862112 No Hit CCCTCGGACCCCAGACTCCGTCAGTTTCTGCAGAAGTCCCTGG 2303 0.11257391482021167 No Hit CTTTAGGAGCGAGGTTCGGAGCCATCGCTGCTGCCTGCTGATC 2298 0.11232950771031108 No Hit AGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAAGAAAT 2283 0.11159628638060934 No Hit CTGCTGATCCGCGCCTAGAGTTTGACCAGCCACTCTCCAGCTC 2277 0.11130299784872862 No Hit GATCAGCAGGCAGCAGCGATGGCTCCGAACCTCGCTCCTAAAG 2170 0.106072685696856 No Hit ATACTAGTTAAGAAAGCTAACAGGATGTGAAAGTCTTCCAGAA 2153 0.105241701523194 No Hit ATGTGAAAGTCTTCCAGAAGAAATTCTTGCAGCCAGCTTTGCG 2141 0.10465512445943256 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.3993279782106174E-4 0.0 3 0.0 4.888142198011797E-5 0.0 7.332213297017695E-4 0.0 4 0.0 4.888142198011797E-5 0.0 0.0015153240813836572 0.0 5 4.888142198011797E-5 4.888142198011797E-5 0.0 0.001710849769304129 0.0 6 4.888142198011797E-5 4.888142198011797E-5 0.0 0.001759731191284247 0.0 7 4.888142198011797E-5 4.888142198011797E-5 0.0 0.0020530197231649547 0.0 8 4.888142198011797E-5 4.888142198011797E-5 0.0 0.0021996639891053086 0.0 9 4.888142198011797E-5 4.888142198011797E-5 0.0 0.0037149880704889656 0.0 10 4.888142198011797E-5 4.888142198011797E-5 0.0 0.006110177747514746 0.0 11 4.888142198011797E-5 4.888142198011797E-5 0.0 0.007087806187117106 0.0 12 4.888142198011797E-5 9.776284396023594E-5 0.0 0.007723264672858639 0.0 13 4.888142198011797E-5 9.776284396023594E-5 0.0 0.008260960314639937 0.0 14 4.888142198011797E-5 9.776284396023594E-5 0.0 0.008945300222361589 0.0 15 9.776284396023594E-5 9.776284396023594E-5 0.0 0.010216217193844655 0.0 16 9.776284396023594E-5 9.776284396023594E-5 0.0 0.012464762604930082 0.0 17 9.776284396023594E-5 9.776284396023594E-5 0.0 0.014957715125916099 0.0 18 9.776284396023594E-5 9.776284396023594E-5 0.0 0.016570802051259992 0.0 19 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.018965991728285773 0.0 20 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.021116774295410964 0.0 21 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.0250272880538204 0.0 22 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.031235228645295383 0.0 23 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.042086904324881574 0.0 24 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.05924428343990298 0.0 25 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.06276374582247148 0.0 26 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.06921609352384704 0.0 27 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.08192526323867771 0.0 28 1.9552568792047188E-4 9.776284396023594E-5 0.0 0.12450098178336047 0.0 29 1.9552568792047188E-4 1.466442659403539E-4 0.0 0.18975768012681796 0.0 30 2.4440710990058986E-4 1.466442659403539E-4 0.0 0.2769132555173683 0.0 31 2.932885318807078E-4 1.466442659403539E-4 0.0 0.6409332050033069 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACG 155 2.1827873E-11 17.903227 22 CGATCGC 155 2.1827873E-11 17.903227 19 GTAAACG 190 0.0 17.526316 27 CGAATTA 85 2.7247974E-5 17.411764 15 TATACAG 270 0.0 17.12963 5 CTTATAC 1720 0.0 16.456394 37 GGTATCA 3955 0.0 16.324903 1 CGCACCG 70 0.00259342 15.857143 5 GTATTAG 375 0.0 15.786668 1 CGCAAGA 270 0.0 15.759258 2 TTATGCG 85 5.3666916E-4 15.235294 20 TCTTATA 2625 0.0 14.870476 37 GGCCGAT 200 6.184564E-11 14.8 16 GTTACCG 75 0.004105862 14.799999 16 TGTCGTG 75 0.004105862 14.799999 11 TACCGTT 75 0.004105862 14.799999 18 GCCTAAA 215 1.2732926E-11 14.627907 1 CGCACGC 205 9.276846E-11 14.439024 23 CGGACCA 295 0.0 14.423729 9 AGGACCG 385 0.0 14.415584 5 >>END_MODULE