##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630801.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1708062 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.971939543178173 33.0 31.0 34.0 30.0 34.0 2 32.138310553129806 33.0 31.0 34.0 30.0 34.0 3 32.25410143191524 34.0 31.0 34.0 30.0 34.0 4 35.837013527611994 37.0 35.0 37.0 35.0 37.0 5 35.81476140795826 37.0 35.0 37.0 35.0 37.0 6 35.84367370739469 37.0 35.0 37.0 35.0 37.0 7 35.8135477517795 37.0 35.0 37.0 35.0 37.0 8 35.80848470371684 37.0 35.0 37.0 35.0 37.0 9 37.54155879587509 39.0 37.0 39.0 35.0 39.0 10 37.441352831454594 39.0 37.0 39.0 34.0 39.0 11 37.55233182402044 39.0 37.0 39.0 35.0 39.0 12 37.47658515908673 39.0 37.0 39.0 35.0 39.0 13 37.52928113850668 39.0 37.0 39.0 35.0 39.0 14 38.79027225007055 40.0 38.0 41.0 35.0 41.0 15 38.762427242102454 40.0 38.0 41.0 35.0 41.0 16 38.74552328896726 40.0 38.0 41.0 35.0 41.0 17 38.72868607814002 40.0 38.0 41.0 35.0 41.0 18 38.71851607260158 40.0 38.0 41.0 35.0 41.0 19 38.744953052055486 40.0 38.0 41.0 34.0 41.0 20 38.728368173989 40.0 38.0 41.0 34.0 41.0 21 38.653622643674524 40.0 38.0 41.0 34.0 41.0 22 38.59616454203653 40.0 38.0 41.0 34.0 41.0 23 38.567865218007306 40.0 38.0 41.0 34.0 41.0 24 38.518486448384195 40.0 38.0 41.0 34.0 41.0 25 38.47123816348587 40.0 38.0 41.0 34.0 41.0 26 38.277891551946006 40.0 38.0 41.0 34.0 41.0 27 38.16383772954377 40.0 38.0 41.0 33.0 41.0 28 38.07329593422253 40.0 38.0 41.0 33.0 41.0 29 37.96105820514712 40.0 37.0 41.0 33.0 41.0 30 37.88525533616461 40.0 37.0 41.0 33.0 41.0 31 37.829425395565266 40.0 37.0 41.0 33.0 41.0 32 37.73202670629052 40.0 37.0 41.0 33.0 41.0 33 37.68880052363439 40.0 37.0 41.0 33.0 41.0 34 37.600593538173676 40.0 37.0 41.0 32.0 41.0 35 37.550342434876484 40.0 37.0 41.0 32.0 41.0 36 37.49363723330886 40.0 37.0 41.0 32.0 41.0 37 37.30250365619047 40.0 36.0 41.0 31.0 41.0 38 37.1970742279847 40.0 36.0 41.0 31.0 41.0 39 37.13017911527802 39.0 36.0 41.0 31.0 41.0 40 37.02383988403231 39.0 36.0 41.0 31.0 41.0 41 36.89217019054343 39.0 35.0 41.0 31.0 41.0 42 36.79838085502751 39.0 35.0 41.0 30.0 41.0 43 35.95137939957683 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 5.0 11 5.0 12 2.0 13 3.0 14 2.0 15 3.0 16 5.0 17 20.0 18 34.0 19 123.0 20 235.0 21 521.0 22 912.0 23 1585.0 24 2655.0 25 4204.0 26 6407.0 27 9418.0 28 13689.0 29 19065.0 30 25825.0 31 33695.0 32 43297.0 33 56093.0 34 73884.0 35 98586.0 36 138145.0 37 211249.0 38 373773.0 39 594618.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.440284954527414 19.107854398727913 12.125496615462437 25.32636403128224 2 18.992343369268795 20.84432532308546 34.39008654252597 25.773244765119767 3 20.688944546509436 23.048929137232722 29.076052274449054 27.186074041808787 4 14.703915900008313 15.37414918193836 33.96217467515817 35.959760242895165 5 14.794252199276139 36.53175353119501 33.87400457360447 14.799989695924387 6 35.35837692074409 34.035708305670404 15.5690484303263 15.036866343259202 7 29.207253600864608 30.230694201966905 21.272471373989937 19.28958082317855 8 27.531143483081994 32.81725136441183 20.000913315792985 19.65069183671319 9 26.69259078417528 13.614201358030328 20.230647365259575 39.46256049253481 10 17.26898672296439 26.5390249300084 32.68341547320882 23.508572873818398 11 35.57517232981004 21.45337815606225 21.459232744478832 21.512216769648877 12 21.76261751622599 25.353529321535166 28.86247688901222 24.021376273226615 13 30.085734592772397 19.84360052503949 25.105060589135526 24.965604293052593 14 22.978030071507945 21.17592921100054 25.46224902843105 30.38379168906047 15 25.97323750543013 27.405269832125533 22.508082259309088 24.113410403135248 16 25.366526507819977 26.33042594472566 24.186300028921668 24.116747518532698 17 23.576193370029895 26.275978272451468 25.86849891865752 24.27932943886112 18 23.508455782050067 24.959339883446855 27.18619113357712 24.346013200925963 19 23.920033347735618 25.371854183279062 27.090351521197707 23.61776094778761 20 24.59342810741062 24.74892597575498 26.815127319734295 23.842518597100103 21 25.14733071750323 24.942303031154605 26.236576892407886 23.67378935893428 22 24.711515155773036 25.01326064276355 26.426207011220903 23.84901719024251 23 24.084664374009844 25.090833939283236 26.620637892535516 24.203863794171408 24 24.14473245116395 25.49532745298473 26.54095694418587 23.818983151665453 25 24.39911431786434 25.153478035340637 26.37767247324746 24.069735173547567 26 24.01060383054011 25.821252390135722 26.392777311362238 23.775366467961938 27 24.388400421062 25.278239314497952 26.233532506431267 24.099827758008786 28 23.529649392118085 25.517691980736064 26.846156638342165 24.106501988803686 29 23.275150433649365 25.672487298470433 27.10241197333586 23.949950294544344 30 23.422978791168003 26.098935518734095 26.956515629994698 23.521570060103205 31 23.872142814487997 25.899762420802052 26.17346442927716 24.05463033543279 32 23.41636310625727 25.567631619929486 26.57011279450043 24.44589247931281 33 23.242072009095686 25.481744807858263 27.030693265232763 24.245489917813288 34 23.984023999128837 25.22209381158295 26.723854286319813 24.070027902968395 35 23.72864685239763 25.33701938220041 27.290754082697234 23.643579682704726 36 23.202963358472935 25.608145371772217 26.867291702526018 24.321599567228823 37 23.624903545655837 24.959515521099352 27.172257213145656 24.243323720099152 38 22.952094244822494 24.796172504276775 27.88335552222343 24.368377728677295 39 23.254835011843834 24.640440452395758 27.727916199763243 24.376808335997172 40 22.62148563693824 24.836920439656172 28.403711340689036 24.137882582716554 41 22.205165854635254 24.75571729831821 28.712482333779455 24.326634513267084 42 22.561359013899963 24.943356857069592 28.52507695856474 23.97020717046571 43 22.086903168620342 24.409242755825023 28.619101648535008 24.884752427019627 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 293.0 1 285.5 2 278.0 3 707.5 4 1137.0 5 1137.0 6 1586.5 7 2036.0 8 1984.0 9 1932.0 10 2729.5 11 3527.0 12 3527.0 13 6004.0 14 8481.0 15 11756.5 16 15032.0 17 14953.0 18 14874.0 19 14874.0 20 17637.0 21 20400.0 22 19989.5 23 19579.0 24 22229.0 25 24879.0 26 24879.0 27 28187.0 28 31495.0 29 36106.5 30 40718.0 31 46121.0 32 51524.0 33 51524.0 34 57743.5 35 63963.0 36 70157.0 37 76351.0 38 81581.0 39 86811.0 40 86811.0 41 90664.0 42 94517.0 43 96808.0 44 99099.0 45 100999.5 46 102900.0 47 102900.0 48 105652.5 49 108405.0 50 110888.0 51 113371.0 52 115728.5 53 118086.0 54 118086.0 55 116286.5 56 114487.0 57 111007.0 58 107527.0 59 101533.0 60 95539.0 61 95539.0 62 88890.5 63 82242.0 64 72963.0 65 63684.0 66 55550.0 67 47416.0 68 47416.0 69 41056.5 70 34697.0 71 29840.5 72 24984.0 73 20080.5 74 15177.0 75 15177.0 76 12059.0 77 8941.0 78 7281.5 79 5622.0 80 4558.0 81 3494.0 82 3494.0 83 2678.5 84 1863.0 85 1561.5 86 1260.0 87 1085.0 88 910.0 89 910.0 90 685.0 91 460.0 92 255.0 93 50.0 94 31.0 95 12.0 96 12.0 97 9.5 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1708062.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.22380856035966 #Duplication Level Percentage of deduplicated Percentage of total 1 85.24137869231835 54.74525986556574 2 9.457014033128761 12.147309176325924 3 2.3915819200316957 4.60789498165599 4 0.9754566953810689 2.505901762522993 5 0.46007936063349986 1.477402438994928 6 0.3025502372005027 1.1658557108313892 7 0.19368770529639898 0.8707553473815901 8 0.13609802574097515 0.6992586840505031 9 0.10162171198241983 0.5873880038341444 >10 0.5962283272643057 7.48535930292267 >50 0.0773131709032161 3.4916312779017025 >100 0.06333971700504018 7.611148210834343 >500 0.0031028426465698573 1.2871495318423427 >1k 3.650403113611597E-4 0.6138884475441326 >5k 1.8252015568057984E-4 0.7037972577916694 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6248 0.3657946842679013 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5760 0.3372242927949922 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4980 0.29155850314567033 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3116 0.18242897506062428 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 5.854588416579726E-5 0.0 1.7563765249739178E-4 5.854588416579726E-5 2 0.0 5.854588416579726E-5 0.0 0.0017563765249739179 5.854588416579726E-5 3 0.0 5.854588416579726E-5 0.0 0.002927294208289863 5.854588416579726E-5 4 0.0 5.854588416579726E-5 0.0 0.004625124849097983 5.854588416579726E-5 5 0.0 1.1709176833159452E-4 0.0 0.005620404879916537 5.854588416579726E-5 6 0.0 1.1709176833159452E-4 0.0 0.005620404879916537 5.854588416579726E-5 7 0.0 1.1709176833159452E-4 0.0 0.006322955489906104 5.854588416579726E-5 8 0.0 1.1709176833159452E-4 0.0 0.006615684910735091 5.854588416579726E-5 9 0.0 1.1709176833159452E-4 0.0 0.011474993296496263 5.854588416579726E-5 10 0.0 1.1709176833159452E-4 0.0 0.0170953981764128 5.854588416579726E-5 11 0.0 1.7563765249739178E-4 0.0 0.018559045280557733 5.854588416579726E-5 12 0.0 1.7563765249739178E-4 0.0 0.020022692384702664 5.854588416579726E-5 13 0.0 1.7563765249739178E-4 0.0 0.021427793604681798 5.854588416579726E-5 14 0.0 1.7563765249739178E-4 0.0 0.02289144070882673 5.854588416579726E-5 15 0.0 1.7563765249739178E-4 0.0 0.024179450160474267 5.854588416579726E-5 16 0.0 1.7563765249739178E-4 0.0 0.026989652600432536 5.854588416579726E-5 17 0.0 1.7563765249739178E-4 0.0 0.030209676229551386 5.854588416579726E-5 18 0.0 1.7563765249739178E-4 0.0 0.031556231565364724 5.854588416579726E-5 19 0.0 1.7563765249739178E-4 0.0 0.0341907963528256 5.854588416579726E-5 20 0.0 1.7563765249739178E-4 0.0 0.03694245290861807 5.854588416579726E-5 21 0.0 1.7563765249739178E-4 0.0 0.04098211891605808 5.854588416579726E-5 22 0.0 1.7563765249739178E-4 0.0 0.04712943675346679 5.854588416579726E-5 23 0.0 1.7563765249739178E-4 0.0 0.054623309926688846 5.854588416579726E-5 24 0.0 1.7563765249739178E-4 0.0 0.0662739408756825 5.854588416579726E-5 25 0.0 1.7563765249739178E-4 0.0 0.07130888691394106 5.854588416579726E-5 26 0.0 1.7563765249739178E-4 0.0 0.07938821892882109 5.854588416579726E-5 27 0.0 1.7563765249739178E-4 0.0 0.09642507122106808 5.854588416579726E-5 28 0.0 1.7563765249739178E-4 0.0 0.1344798959288363 5.854588416579726E-5 29 0.0 1.7563765249739178E-4 0.0 0.1882250175930382 5.854588416579726E-5 30 0.0 1.7563765249739178E-4 0.0 0.2649201258502326 5.854588416579726E-5 31 0.0 1.7563765249739178E-4 0.0 0.5178968913306425 5.854588416579726E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGTCG 50 9.094469E-6 25.899998 5 GTGCCGA 60 9.239324E-4 18.5 9 ATTCGCG 75 2.068008E-4 17.266666 30 GGTATCA 2740 0.0 17.082117 1 AAGACGG 255 0.0 16.686274 5 TCTAGCG 250 0.0 16.279999 28 GTCTAGA 160 6.2937033E-10 16.1875 1 CGGTCCA 280 0.0 15.857143 10 AGTCGGT 235 0.0 15.744679 11 CGCGCTT 95 7.062886E-5 15.578948 12 GGACCGT 120 1.9367435E-6 15.416666 6 GACGGAC 280 0.0 15.196429 7 CTAGCGG 280 0.0 15.196429 29 CGAAATA 110 1.4526106E-5 15.136364 24 TATAGAC 75 0.0041054925 14.8 3 CGGACCA 330 0.0 14.575757 9 CTTGCGC 320 0.0 14.453126 3 TATACTG 295 0.0 14.423729 5 CAAGACG 310 0.0 14.322581 4 GCCGTCT 275 0.0 14.127274 36 >>END_MODULE