##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630799.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1815654 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.996660156615743 33.0 31.0 34.0 30.0 34.0 2 32.167981895228934 33.0 31.0 34.0 30.0 34.0 3 32.2834482781411 34.0 31.0 34.0 30.0 34.0 4 35.862741469465 37.0 35.0 37.0 35.0 37.0 5 35.83761608764666 37.0 35.0 37.0 35.0 37.0 6 35.86677692996573 37.0 35.0 37.0 35.0 37.0 7 35.84405729285425 37.0 35.0 37.0 35.0 37.0 8 35.83441118186615 37.0 35.0 37.0 35.0 37.0 9 37.56094332951102 39.0 37.0 39.0 35.0 39.0 10 37.47176995176394 39.0 37.0 39.0 35.0 39.0 11 37.572166833548685 39.0 37.0 39.0 35.0 39.0 12 37.5009082126881 39.0 37.0 39.0 35.0 39.0 13 37.54939707675582 39.0 37.0 39.0 35.0 39.0 14 38.828409487710765 40.0 38.0 41.0 35.0 41.0 15 38.80805979553373 40.0 38.0 41.0 35.0 41.0 16 38.78870919239018 40.0 38.0 41.0 35.0 41.0 17 38.77807831227756 40.0 38.0 41.0 35.0 41.0 18 38.763898297803436 40.0 38.0 41.0 35.0 41.0 19 38.77416126640869 40.0 38.0 41.0 35.0 41.0 20 38.76538977139918 40.0 38.0 41.0 35.0 41.0 21 38.69345866558276 40.0 38.0 41.0 34.0 41.0 22 38.637796628652815 40.0 38.0 41.0 34.0 41.0 23 38.628263975405005 40.0 38.0 41.0 34.0 41.0 24 38.57422063895434 40.0 38.0 41.0 34.0 41.0 25 38.52560785259747 40.0 38.0 41.0 34.0 41.0 26 38.35269935791731 40.0 38.0 41.0 34.0 41.0 27 38.24322090001729 40.0 38.0 41.0 34.0 41.0 28 38.14639683552043 40.0 38.0 41.0 33.0 41.0 29 38.0588008508229 40.0 38.0 41.0 33.0 41.0 30 37.993498210562144 40.0 37.0 41.0 33.0 41.0 31 37.95731180059637 40.0 37.0 41.0 33.0 41.0 32 37.88103350087627 40.0 37.0 41.0 33.0 41.0 33 37.837762040564996 40.0 37.0 41.0 33.0 41.0 34 37.776399027568026 40.0 37.0 41.0 33.0 41.0 35 37.72174764575189 40.0 37.0 41.0 33.0 41.0 36 37.691578902147654 40.0 37.0 41.0 33.0 41.0 37 37.51714368486507 40.0 37.0 41.0 32.0 41.0 38 37.41645710030656 40.0 36.0 41.0 32.0 41.0 39 37.361464794503796 40.0 36.0 41.0 32.0 41.0 40 37.261813649516924 40.0 36.0 41.0 31.0 41.0 41 37.158285664559436 39.0 36.0 41.0 31.0 41.0 42 37.08131670461442 39.0 36.0 41.0 31.0 41.0 43 36.236279048761496 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 4.0 10 5.0 11 4.0 12 4.0 13 1.0 14 7.0 15 1.0 16 12.0 17 26.0 18 52.0 19 87.0 20 213.0 21 451.0 22 837.0 23 1434.0 24 2484.0 25 3871.0 26 6104.0 27 8934.0 28 12985.0 29 18547.0 30 25001.0 31 33617.0 32 43856.0 33 57088.0 34 75903.0 35 103030.0 36 144878.0 37 221521.0 38 408898.0 39 645796.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.86760913698315 18.91505760458766 11.885359214916498 25.331974043512695 2 19.47309344181215 20.42134679845389 33.25121416305089 26.854345596683064 3 21.063649792306244 22.464081812944535 28.689111471679073 27.783156923070145 4 14.83542569234006 14.78789460987611 34.02724307604863 36.3494366217352 5 15.022080198099419 36.145708378358435 33.985329804026534 14.846881619515612 6 36.14416623431557 33.85198942089186 14.998837884310557 15.00500646048201 7 29.86312370088133 29.775662103021833 20.90161451465973 19.4595996814371 8 28.46819933753898 31.50737971001083 19.800688897774577 20.223732054675615 9 26.773217804713894 13.691154812535869 19.813081126690438 39.7225462560598 10 17.89878468034108 25.933134837364385 32.390422404268655 23.77765807802588 11 36.38584223646135 21.34900151680882 20.90161451465973 21.363541732070097 12 22.980094225001018 24.97149787349352 27.817029015440163 24.231378886065297 13 30.852188798085976 19.25284222654757 24.60749680280494 25.287472172561515 14 23.33484243143242 20.672495971148688 24.458129136939085 31.534532460479802 15 26.303965403099934 27.428794252649457 21.75921183221032 24.50802851204029 16 25.94569229599913 25.817308804430798 23.556801020458742 24.68019787911133 17 24.653595894371946 25.57337466279368 24.678600658495505 25.094428784338866 18 24.1988286314463 24.283316094365997 26.56029177365291 24.957563500534793 19 25.18271653079276 24.589156304009467 26.257535852095167 23.970591313102606 20 25.82496444807216 24.093246841083158 25.32343717470399 24.758351536140697 21 25.840110505635987 24.31961155594623 25.508990149004163 24.331287789413622 22 25.740532061725418 24.39446061859804 25.66579315221953 24.199214167457015 23 24.982678417804273 24.245423412169938 25.536638588629774 25.235259581396015 24 24.66835641592506 24.903313076169802 25.893865240844345 24.534465267060796 25 25.15369117684316 24.80891183011741 25.241923846724102 24.795473146315324 26 24.86718284430844 25.41299168233595 25.44559701352791 24.2742284598277 27 25.384682323834827 24.095560057147452 25.45193081941824 25.067826799599484 28 24.495195670540753 24.810288744441397 25.74537880014584 24.94913678487201 29 24.422384441088447 25.203921011382125 26.039267393457123 24.33442715407231 30 24.57973821003341 25.26356893989714 25.54187086306091 24.614821987008536 31 24.248287393963828 25.721145108043714 25.57750540576564 24.453062092226823 32 24.17834014630541 24.731584321682433 25.47208884512137 25.617986686890788 33 23.605929323538515 25.21780030776789 26.07820653053941 25.098063838154182 34 25.40869570964512 24.186436402530436 25.607081525444826 24.797786362379618 35 24.44402953426148 24.333766235196794 26.3082062992178 24.91399793132392 36 23.698513042683242 25.377852828787862 26.11758628020537 24.806047848323523 37 24.650842065723978 24.12375926250266 26.49579710671747 24.729601565055898 38 24.311405146575282 24.4139026488527 26.353148782752662 24.921543421819354 39 24.26960202769911 24.135380419397087 26.515734826128767 25.079282726775038 40 23.53201656262702 24.061247352193753 27.183373043542435 25.223363041636787 41 22.66703898429987 24.382013313109216 27.703406045424956 25.247541657165957 42 23.576022744421568 24.128826307214922 27.821875753860592 24.473275194502918 43 23.54198542233267 23.70126687133121 27.50039379749666 25.256353908839458 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 199.0 1 203.0 2 207.0 3 530.5 4 854.0 5 854.0 6 1122.5 7 1391.0 8 1274.5 9 1158.0 10 1733.0 11 2308.0 12 2308.0 13 4156.5 14 6005.0 15 8293.0 16 10581.0 17 10788.5 18 10996.0 19 10996.0 20 13825.5 21 16655.0 22 16985.5 23 17316.0 24 20449.5 25 23583.0 26 23583.0 27 26840.0 28 30097.0 29 34525.0 30 38953.0 31 44908.0 32 50863.0 33 50863.0 34 57171.0 35 63479.0 36 69515.0 37 75551.0 38 81620.5 39 87690.0 40 87690.0 41 91257.0 42 94824.0 43 96471.0 44 98118.0 45 101460.0 46 104802.0 47 104802.0 48 110859.0 49 116916.0 50 117918.0 51 118920.0 52 122281.0 53 125642.0 54 125642.0 55 123087.0 56 120532.0 57 118148.0 58 115764.0 59 115640.0 60 115516.0 61 115516.0 62 107959.5 63 100403.0 64 92848.5 65 85294.0 66 74421.0 67 63548.0 68 63548.0 69 55719.5 70 47891.0 71 40558.5 72 33226.0 73 24948.0 74 16670.0 75 16670.0 76 12178.5 77 7687.0 78 6163.0 79 4639.0 80 3899.5 81 3160.0 82 3160.0 83 2393.0 84 1626.0 85 1385.0 86 1144.0 87 1005.5 88 867.0 89 867.0 90 681.5 91 496.0 92 276.5 93 57.0 94 36.5 95 16.0 96 16.0 97 12.5 98 9.0 99 5.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1815654.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.02324188454623 #Duplication Level Percentage of deduplicated Percentage of total 1 87.07055971358218 50.52116147284005 2 8.269127586665036 9.596031802704786 3 1.9345881906213829 3.3675323559423336 4 0.7491763293424233 1.7387855748644758 5 0.4276340399986105 1.2406356670452545 6 0.24801855301589765 0.8634504296097948 7 0.17333622707783175 0.7040270881764163 8 0.1377632656890121 0.6394777030302845 9 0.10277027684532104 0.5366758168744059 >10 0.6765540269981324 7.831484136942728 >50 0.09754173087938309 3.969389288606014 >100 0.09957732079423327 11.972991407937526 >500 0.010396060681984795 4.110759221976644 >1k 0.002956677808637877 2.9075980334493727 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4650 0.2561060642611423 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4015 0.22113244043193253 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3509 0.1932636945144835 No Hit ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC 2499 0.1376363558255042 No Hit GGCCTAGGTATGGGAAAAGACACAAAGAGGACACGCTGGCCTT 2281 0.12562966292035815 No Hit GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA 2218 0.12215983882391689 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2216 0.12204968567799811 No Hit GTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAAGGGTGCA 2166 0.11929585703002886 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 5.5076572959385434E-5 0.0 2 0.0 0.0 0.0 6.058423025532397E-4 0.0 3 0.0 0.0 0.0 0.0011566080321470942 0.0 4 0.0 0.0 0.0 0.0018726034806191047 0.0 5 0.0 0.0 0.0 0.002037833199497261 0.0 6 0.0 0.0 0.0 0.002037833199497261 0.0 7 0.0 0.0 0.0 0.0022030629183754174 0.0 8 0.0 0.0 0.0 0.002368292637253574 0.0 9 0.0 0.0 0.0 0.0038553601071569803 0.0 10 0.0 0.0 0.0 0.005177197858182231 0.0 11 0.0 0.0 0.0 0.005893193306654242 0.0 12 0.0 0.0 0.0 0.006443959036248096 0.0 13 0.0 0.0 0.0 0.006774418474004409 0.0 14 0.0 0.0 0.0 0.007049801338801336 0.0 15 0.0 0.0 0.0 0.008041179652070274 0.0 16 0.0 0.0 0.0 0.009473170549014295 0.0 17 0.0 0.0 0.0 0.010684855154120773 0.0 18 0.0 0.0 0.0 0.011125467737795857 0.0 19 0.0 0.0 0.0 0.012722688353618035 0.0 20 0.0 0.0 0.0 0.0139894495316839 0.0 21 0.0 0.0 0.0 0.01591712958526239 0.0 22 0.0 0.0 0.0 0.01955218340058183 0.0 23 0.0 0.0 0.0 0.02318723721590127 0.0 24 0.0 0.0 0.0 0.028860124230717966 0.0 25 0.0 0.0 0.0 0.031008110576134 0.0 26 0.0 0.0 0.0 0.03585484899655992 0.0 27 0.0 0.0 0.0 0.04642955100476192 0.0 28 0.0 0.0 0.0 0.07468383293292664 0.0 29 0.0 0.0 0.0 0.12067277135401348 0.0 30 0.0 0.0 0.0 0.17800748380473372 0.0 31 0.0 0.0 0.0 0.36345030495898445 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1865 0.0 21.327078 1 AAGACGG 415 0.0 19.614458 5 CGCAAGA 415 0.0 18.72289 2 ACGGACC 410 0.0 18.5 8 GACGGAC 415 0.0 18.27711 7 CAAGACG 465 0.0 17.903225 4 CGAATTA 145 1.546141E-10 17.862068 15 CGAACGA 220 0.0 17.659092 16 GCTTTAT 810 0.0 16.901234 1 CGGACCA 465 0.0 16.709677 9 ATAACGA 245 0.0 16.612244 12 GCGCAAG 495 0.0 16.070705 1 TAACGAA 245 0.0 15.857142 13 ACGAACG 245 0.0 15.857142 15 GCGAAAG 490 0.0 15.479591 18 GAGCGAA 515 0.0 15.446601 16 CGCAATA 290 0.0 15.310345 36 AGCGAAA 505 0.0 15.019801 17 CGAAAGC 495 0.0 14.949493 19 GCGTTAT 260 0.0 14.942307 1 >>END_MODULE