##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630784.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1019625 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.866655878386663 31.0 31.0 33.0 28.0 34.0 2 31.0412632095133 31.0 31.0 34.0 28.0 34.0 3 31.102369008213802 31.0 31.0 34.0 27.0 34.0 4 34.9323555228638 35.0 35.0 37.0 32.0 37.0 5 34.40146328306976 35.0 35.0 37.0 30.0 37.0 6 34.568457030771114 35.0 35.0 37.0 31.0 37.0 7 34.51986171386539 35.0 35.0 37.0 30.0 37.0 8 34.532009317150916 35.0 35.0 37.0 30.0 37.0 9 36.00305308324139 37.0 35.0 39.0 32.0 39.0 10 35.68752139266887 37.0 35.0 39.0 30.0 39.0 11 35.958872134363126 37.0 35.0 39.0 31.0 39.0 12 35.82881745739855 37.0 35.0 39.0 30.0 39.0 13 35.961514282211596 37.0 35.0 39.0 31.0 39.0 14 36.86616746352826 38.0 36.0 40.0 31.0 41.0 15 36.83170675493441 38.0 36.0 40.0 31.0 41.0 16 36.75593576069633 38.0 36.0 40.0 31.0 41.0 17 36.74878999632218 38.0 36.0 40.0 31.0 41.0 18 36.73315385558416 38.0 36.0 40.0 31.0 41.0 19 36.81247909770749 38.0 36.0 40.0 31.0 41.0 20 36.78057324996935 38.0 36.0 40.0 31.0 41.0 21 36.73015863675371 38.0 36.0 40.0 31.0 41.0 22 36.63717543214417 38.0 35.0 40.0 31.0 41.0 23 36.541344121613335 38.0 35.0 40.0 31.0 41.0 24 36.436739977933065 38.0 35.0 40.0 30.0 41.0 25 36.350465121981124 38.0 35.0 40.0 30.0 41.0 26 36.10402353806546 38.0 35.0 40.0 30.0 41.0 27 35.90542699521883 38.0 34.0 40.0 29.0 41.0 28 35.77362167463528 38.0 34.0 40.0 29.0 41.0 29 35.61177099423808 38.0 34.0 40.0 28.0 41.0 30 35.46301434350864 38.0 34.0 40.0 27.0 41.0 31 35.340970454824074 38.0 34.0 40.0 27.0 41.0 32 35.1659904376609 38.0 34.0 40.0 27.0 41.0 33 35.017545666298886 37.0 33.0 40.0 27.0 41.0 34 34.92208311879367 37.0 33.0 40.0 26.0 41.0 35 34.797804094642636 37.0 33.0 40.0 26.0 40.0 36 34.71155866127253 37.0 33.0 40.0 25.0 40.0 37 34.48078264067672 37.0 33.0 40.0 25.0 40.0 38 34.233127865636874 37.0 33.0 39.0 24.0 40.0 39 34.08971141350987 37.0 33.0 39.0 24.0 40.0 40 33.79595831800907 37.0 33.0 39.0 23.0 40.0 41 33.637118548485965 37.0 32.0 39.0 22.0 40.0 42 33.41561260267255 37.0 32.0 39.0 21.0 40.0 43 32.59031604756651 36.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 3.0 12 1.0 13 3.0 14 12.0 15 12.0 16 38.0 17 102.0 18 177.0 19 356.0 20 676.0 21 1164.0 22 1975.0 23 3136.0 24 4906.0 25 7434.0 26 10473.0 27 14804.0 28 20005.0 29 26410.0 30 34189.0 31 42773.0 32 54224.0 33 69099.0 34 90463.0 35 119286.0 36 156588.0 37 175746.0 38 137280.0 39 48286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.81632953291651 21.905406399411547 13.195145273997793 22.083118793674146 2 18.426774549466714 23.6993012136815 34.511609660414365 23.362314576437416 3 21.867941645212703 26.2285644231948 29.694152261860978 22.20934166973152 4 15.339659188427119 16.894054186588207 34.388034816721834 33.378251808262846 5 13.021159740100527 39.80787054063994 33.60058845163663 13.5703812676229 6 32.64690449920314 35.17518695598872 16.5421601078828 15.63574843692534 7 26.209930121368153 32.94132646806424 22.935490989334316 17.9132524212333 8 27.0404315312002 33.48505578031139 21.270859384577665 18.20365330391075 9 26.564276081892853 14.026921662375875 22.281721221037145 37.12708103469413 10 17.19014343508643 28.60639941154836 33.05901679539046 21.144440357974744 11 32.29785460340812 23.347603285521636 22.553782027706266 21.800760083363983 12 20.39053573617752 28.30393527031997 30.442662743655756 20.862866249846757 13 28.841583915655267 21.472207919578278 27.76108863552777 21.92511952923869 14 21.98033590780924 23.099767071227166 28.410739242368514 26.50915777859507 15 24.824420742920193 28.26313595684688 25.83714600956234 21.075297290670587 16 22.62341547137428 27.657128846389607 27.675763148216255 22.04369253401986 17 21.11335049650607 28.117690327326223 28.746941277430427 22.022017898737282 18 20.650140983204608 25.749466715704305 31.127326222876057 22.47306607821503 19 21.420718401373055 26.918229741326467 31.377418168444283 20.2836336888562 20 22.411278656368765 25.550668137795757 31.43616525683462 20.601887949000858 21 22.79818560745372 26.47404683094275 30.0595807282089 20.668186833394632 22 22.415593968370725 26.413436312369743 30.32703199705774 20.843937722201787 23 21.6428588942013 26.620571288463896 30.538089984062765 21.198479833272035 24 21.656393281843815 27.25070491602305 30.34831433124923 20.744587470883904 25 21.590878999632217 26.726786808875815 30.56349147971068 21.11884271178129 26 21.331175677332354 27.370454824077477 30.276425156307468 21.0219443422827 27 21.489665318131664 27.06387152139267 30.155694495525314 21.29076866495035 28 21.05685913938948 27.127326222876057 30.86369988966532 20.952114748069143 29 20.62689714355768 27.623881328919946 30.914502880961138 20.834718646561235 30 20.725855093784478 28.119946058599975 30.536422704425647 20.617776143189896 31 21.000760083363982 28.024518818192963 30.252494789751132 20.722226308691923 32 20.361701605982592 27.89211719995096 30.37116586980508 21.37501532426137 33 20.375137918352333 27.762167463528257 30.827313963466963 21.035380654652446 34 21.006252298639204 27.465293612847862 30.287017285766826 21.241436802746108 35 20.788132891994607 27.553070981978667 30.60664459973029 21.052151526296434 36 20.655829349025375 28.00166727963712 29.92070614196396 21.421797229373542 37 21.132082873605494 27.411156062277797 29.84028441829104 21.61647664582567 38 20.65288709084222 27.383989211719996 30.470810346941278 21.492313350496506 39 20.889640799313472 27.19715581708962 30.48944464876793 21.423758734828983 40 20.444379060929265 27.07220791957828 30.873605492215273 21.609807527277187 41 20.059727841118058 27.401250459727837 30.812504597278412 21.72651710187569 42 20.41662375873483 27.07711168321687 30.680397204854724 21.825867353193576 43 19.999803849454455 26.880372686036537 30.374402353806545 22.745421110702463 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 608.0 1 489.5 2 371.0 3 823.0 4 1275.0 5 1275.0 6 1932.0 7 2589.0 8 2826.0 9 3063.0 10 4504.5 11 5946.0 12 5946.0 13 9878.0 14 13810.0 15 18890.5 16 23971.0 17 23029.5 18 22088.0 19 22088.0 20 23600.0 21 25112.0 22 22659.0 23 20206.0 24 21383.5 25 22561.0 26 22561.0 27 24806.5 28 27052.0 29 31635.5 30 36219.0 31 38362.0 32 40505.0 33 40505.0 34 42827.0 35 45149.0 36 47847.5 37 50546.0 38 53006.5 39 55467.0 40 55467.0 41 57903.0 42 60339.0 43 59707.0 44 59075.0 45 60154.0 46 61233.0 47 61233.0 48 62162.0 49 63091.0 50 61905.5 51 60720.0 52 60990.5 53 61261.0 54 61261.0 55 58298.0 56 55335.0 57 52418.0 58 49501.0 59 45333.0 60 41165.0 61 41165.0 62 37478.5 63 33792.0 64 29821.0 65 25850.0 66 21883.0 67 17916.0 68 17916.0 69 15246.0 70 12576.0 71 10755.5 72 8935.0 73 6999.0 74 5063.0 75 5063.0 76 3934.0 77 2805.0 78 2310.0 79 1815.0 80 1446.0 81 1077.0 82 1077.0 83 839.0 84 601.0 85 503.5 86 406.0 87 368.0 88 330.0 89 330.0 90 246.0 91 162.0 92 94.5 93 27.0 94 17.0 95 7.0 96 7.0 97 5.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1019625.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.4980654660084 #Duplication Level Percentage of deduplicated Percentage of total 1 89.36637130293383 58.53324438059174 2 6.723792424411192 8.807907927878711 3 1.4858983251839775 2.9197039733619716 4 0.6247156803457266 1.6367067411570548 5 0.35811118884961585 1.1727795045691116 6 0.21214180431366508 0.8336926672208145 7 0.15621846482922247 0.716240506546862 8 0.11812073304819036 0.618934360486662 9 0.09454917639349733 0.5573509330660616 >10 0.6987159715906239 9.30750168122251 >50 0.10037472851684087 4.531948965772858 >100 0.05828620091778929 6.411164009139127 >500 0.0016524436291624738 0.7231856166936599 >1k 4.5066644431703836E-4 0.4156103462468054 >5k 6.008885924227178E-4 2.8140283860460777 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8613 0.8447223243839647 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8008 0.785386784356994 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6932 0.6798577908544808 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5047 0.49498590167953904 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1629 0.15976461934534755 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1362 0.13357852151526295 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1233 0.120926811327694 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.001471129091577786 0.0 3 0.0 0.0 0.0 0.0025499570920681624 0.0 4 0.0 0.0 0.0 0.0038249356381022436 0.0 5 0.0 2.942258183155572E-4 0.0 0.00451146254750521 0.0 6 0.0 2.942258183155572E-4 0.0 0.004707613093048915 0.0 7 0.0 2.942258183155572E-4 0.0 0.005197989456908177 0.0 8 0.0 2.942258183155572E-4 0.0 0.005786441093539292 0.0 9 0.0 2.942258183155572E-4 0.0 0.008630624003923011 0.0 10 0.0 2.942258183155572E-4 0.0 0.013142086551428222 0.0 11 0.0 3.923010910874096E-4 0.0 0.01559396837072453 0.0 12 0.0 3.923010910874096E-4 0.0 0.017261248007846022 0.0 13 0.0 3.923010910874096E-4 0.0 0.018928527644967514 0.0 14 0.0 3.923010910874096E-4 0.0 0.02128233419149197 0.0 15 0.0 3.923010910874096E-4 0.0 0.02442074292019125 0.0 16 0.0 3.923010910874096E-4 0.0 0.030893710923133505 0.0 17 0.0 3.923010910874096E-4 0.0 0.03903395856319725 0.0 18 0.0 6.865269094029668E-4 0.0 0.04236851783744024 0.0 19 0.0 6.865269094029668E-4 0.0 0.048449184749295084 0.0 20 0.0 6.865269094029668E-4 0.0 0.054137550570062525 0.0 21 0.0 6.865269094029668E-4 0.0 0.06355277675616035 0.0 22 0.0 6.865269094029668E-4 0.0 0.07914674512688488 0.0 23 0.0 6.865269094029668E-4 0.0 0.10366556331984798 0.0 24 0.0 6.865269094029668E-4 0.0 0.13691308078950595 0.0 25 0.0 6.865269094029668E-4 0.0 0.14740713497609415 0.0 26 0.0 6.865269094029668E-4 0.0 0.16535490989334314 0.0 27 0.0 6.865269094029668E-4 0.0 0.18379306117445138 0.0 28 0.0 7.846021821748192E-4 0.0 0.221257815373299 0.0 29 0.0 7.846021821748192E-4 0.0 0.26450901066568594 0.0 30 0.0 8.826774549466716E-4 0.0 0.3441461321564301 0.0 31 0.0 8.826774549466716E-4 0.0 0.6063994115483634 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 50 0.0070343493 18.5 30 GTCATAA 50 0.0070343493 18.5 1 ATTACGT 50 0.0070343493 18.5 17 TACGATG 50 0.0070343493 18.5 21 AATTACG 60 9.2358416E-4 18.5 16 TACGACG 145 1.546141E-10 17.862068 5 GACCATG 85 2.7226268E-5 17.411764 7 TCTATAC 75 2.0669778E-4 17.266666 3 GTGTAAG 110 7.8054654E-7 16.818182 1 GACGGTA 135 2.2182576E-8 16.444445 8 ACGGTAT 135 2.2182576E-8 16.444445 9 GTTCCGG 80 3.3820962E-4 16.1875 1 GGTATCA 4245 0.0 15.95053 1 TATAGTG 120 1.9348809E-6 15.416666 5 CGACGGT 145 5.3425538E-8 15.310345 7 ACCCACG 195 4.1836756E-11 15.179487 14 CCCACGG 220 1.8189894E-12 15.136364 15 AGTCGGT 160 1.0955773E-8 15.031251 11 AGTACTC 75 0.004103983 14.8 5 CGGTGAT 165 1.6438207E-8 14.575757 14 >>END_MODULE