##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630765.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3186394 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.081969147569325 33.0 31.0 34.0 30.0 34.0 2 32.25855998975645 34.0 31.0 34.0 30.0 34.0 3 32.36684289513475 34.0 31.0 34.0 30.0 34.0 4 35.93365823561054 37.0 35.0 37.0 35.0 37.0 5 35.9102691004314 37.0 35.0 37.0 35.0 37.0 6 35.94463867305801 37.0 35.0 37.0 35.0 37.0 7 35.92417918185887 37.0 35.0 37.0 35.0 37.0 8 35.919707669547456 37.0 35.0 37.0 35.0 37.0 9 37.656291720358496 39.0 37.0 39.0 35.0 39.0 10 37.574272986956416 39.0 37.0 39.0 35.0 39.0 11 37.67059535010422 39.0 37.0 39.0 35.0 39.0 12 37.61404616001662 39.0 37.0 39.0 35.0 39.0 13 37.65376786423776 39.0 37.0 39.0 35.0 39.0 14 38.96199434219371 40.0 38.0 41.0 36.0 41.0 15 38.93982570893618 40.0 38.0 41.0 36.0 41.0 16 38.919844187504744 40.0 38.0 41.0 36.0 41.0 17 38.915009254976 40.0 38.0 41.0 36.0 41.0 18 38.89823857313314 40.0 38.0 41.0 35.0 41.0 19 38.93735018331066 40.0 38.0 41.0 35.0 41.0 20 38.918786565628736 40.0 38.0 41.0 35.0 41.0 21 38.854561614163224 40.0 38.0 41.0 35.0 41.0 22 38.803909685996146 40.0 38.0 41.0 35.0 41.0 23 38.78366266067536 40.0 38.0 41.0 35.0 41.0 24 38.73668479164849 40.0 38.0 41.0 35.0 41.0 25 38.69505779887861 40.0 38.0 41.0 35.0 41.0 26 38.52799967612292 40.0 38.0 41.0 34.0 41.0 27 38.42779455396916 40.0 38.0 41.0 34.0 41.0 28 38.34196210512573 40.0 38.0 41.0 34.0 41.0 29 38.23995902578275 40.0 38.0 41.0 34.0 41.0 30 38.17035683597195 40.0 38.0 41.0 34.0 41.0 31 38.12817153183191 40.0 38.0 41.0 33.0 41.0 32 38.02262651762462 40.0 37.0 41.0 33.0 41.0 33 37.99655409845738 40.0 37.0 41.0 33.0 41.0 34 37.933779689517365 40.0 37.0 41.0 33.0 41.0 35 37.8797788346325 40.0 37.0 41.0 33.0 41.0 36 37.830761042105905 40.0 37.0 41.0 33.0 41.0 37 37.65848605037544 40.0 37.0 41.0 33.0 41.0 38 37.554393461699966 40.0 37.0 41.0 33.0 41.0 39 37.49410399341701 40.0 37.0 41.0 32.0 41.0 40 37.39828250994698 40.0 37.0 41.0 32.0 41.0 41 37.28084442790188 40.0 36.0 41.0 32.0 41.0 42 37.19777811532409 40.0 36.0 41.0 31.0 41.0 43 36.378727803278565 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 7.0 10 7.0 11 7.0 12 5.0 13 8.0 14 13.0 15 6.0 16 9.0 17 34.0 18 88.0 19 199.0 20 380.0 21 739.0 22 1297.0 23 2195.0 24 3815.0 25 6098.0 26 9272.0 27 13966.0 28 20607.0 29 28960.0 30 39967.0 31 53292.0 32 70337.0 33 92773.0 34 126201.0 35 170810.0 36 245682.0 37 382176.0 38 706263.0 39 1211178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.07822573103012 19.577522428174294 12.43185870924939 24.912393131546192 2 18.09173630128603 21.420577618461493 35.64901264564269 24.83867343460978 3 20.07975159380792 24.012065049080558 29.83761581273377 26.07056754437775 4 14.271869706006225 15.914792709250644 34.9777208970391 34.83561668770403 5 13.868059003374974 37.523357124071914 34.59644350322025 14.012140369332856 6 33.88360008209907 35.17082319386742 16.22533183278653 14.72024489124697 7 28.08786358498039 31.10544395953545 22.06848870541433 18.73820375006983 8 26.450338533150642 33.99488575486898 20.73280956466777 18.821966147312605 9 26.341563535457325 14.284987983281413 20.618856299628984 38.75459218163228 10 16.759572105646697 27.22406582487916 33.424523144344356 22.591838925129785 11 34.325447512140684 22.431124336789487 22.177608920930684 21.065819230139148 12 20.987266483680298 26.233290672779326 29.766563708066236 23.012879135474144 13 29.04226533190811 20.559039465929196 26.362245221400745 24.036449980761954 14 22.509677083248334 21.79560970802732 25.99756966652586 29.697143542198486 15 25.07144439764825 28.155589045171435 23.447476991232094 23.325489565948214 16 24.455136433222005 27.25999986191287 24.933545569066474 23.35131813579865 17 22.85150549492624 27.238816040954134 26.402541556380033 23.507136907739596 18 22.49015658452784 25.88044667420288 28.085635360849913 23.54376138041937 19 23.34626540220701 26.225068211903483 27.963271334304547 22.465395051584956 20 23.945186941727858 25.37143868586245 27.86861888391706 22.814755488492636 21 24.081328297756023 26.065828645170686 26.80129952541964 23.05154353165365 22 23.865410241169172 25.859859138574826 27.02597356133611 23.248757058919896 23 23.225031179446106 26.019977441584434 27.37702870392048 23.377962675048973 24 23.496435155225626 26.40928899564837 27.147301934412383 22.946973914713624 25 23.614782101648444 25.93834911815676 27.161204797649003 23.28566398254579 26 23.24561871507416 26.681006805812462 27.171686866093776 22.901687613019607 27 23.743736650269867 25.957524399054225 26.734609718697687 23.564129231978217 28 22.855742259117985 26.232537470256347 27.590028100730795 23.321692169894874 29 22.635901272723963 26.635751887556907 27.694691867986194 23.033654971732936 30 22.529166198530376 27.17322465457818 27.605280451821084 22.69232869507035 31 23.215114012893572 26.71584242250017 26.99364861972499 23.075394944881268 32 22.38718752294914 26.5100298330966 27.307326087106613 23.795456556847647 33 22.377113439204315 26.264831028429004 27.767030693630478 23.591024838736203 34 23.23934202738268 25.955892460254443 27.52117283675528 23.283592675607597 35 23.064944259874956 26.03544947674393 27.915034989395537 22.984571273985576 36 22.487928360397362 26.38480991365161 27.657188659029615 23.470073066921415 37 23.17208731876849 25.4134611099569 27.711450624122442 23.703000947152173 38 22.53914613195983 25.40348117652745 28.499551530664448 23.557821160848285 39 22.66345593168955 25.339176511128255 28.38804617382533 23.60932138335686 40 21.993576437816543 25.281399600928196 29.179599258597648 23.545424702657613 41 21.414708915469962 25.49772564221499 29.52528783320581 23.56227760910923 42 22.091178931419027 25.195032378293458 29.27123889889323 23.442549791394285 43 21.345539817109874 24.958840620463132 29.287777970960278 24.407841591466717 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 880.0 1 765.5 2 651.0 3 1552.0 4 2453.0 5 2453.0 6 3248.5 7 4044.0 8 3958.5 9 3873.0 10 5816.5 11 7760.0 12 7760.0 13 12933.0 14 18106.0 15 24392.0 16 30678.0 17 31332.5 18 31987.0 19 31987.0 20 37142.0 21 42297.0 22 43037.0 23 43777.0 24 48981.5 25 54186.0 26 54186.0 27 60378.5 28 66571.0 29 79162.5 30 91754.0 31 101568.0 32 111382.0 33 111382.0 34 121874.5 35 132367.0 36 142876.0 37 153385.0 38 166718.5 39 180052.0 40 180052.0 41 187167.5 42 194283.0 43 190650.5 44 187018.0 45 193371.0 46 199724.0 47 199724.0 48 205055.0 49 210386.0 50 214251.0 51 218116.0 52 226774.0 53 235432.0 54 235432.0 55 218616.5 56 201801.0 57 191544.5 58 181288.0 59 164988.0 60 148688.0 61 148688.0 62 137549.5 63 126411.0 64 111493.5 65 96576.0 66 83578.5 67 70581.0 68 70581.0 69 60267.0 70 49953.0 71 43326.5 72 36700.0 73 29341.0 74 21982.0 75 21982.0 76 17132.0 77 12282.0 78 10138.0 79 7994.0 80 6281.5 81 4569.0 82 4569.0 83 3572.0 84 2575.0 85 2163.5 86 1752.0 87 1536.0 88 1320.0 89 1320.0 90 988.0 91 656.0 92 365.5 93 75.0 94 47.0 95 19.0 96 19.0 97 13.0 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3186394.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.764322125707906 #Duplication Level Percentage of deduplicated Percentage of total 1 83.70202393176953 45.83884601173139 2 10.266536402991031 11.244798133774147 3 2.65304008756603 4.35875825903647 4 1.0682465134713952 2.3400718469364747 5 0.5320784080928784 1.4569456668466134 6 0.3321696467930243 1.0914627322413482 7 0.22825673162844454 0.8750227624782978 8 0.15627647070668038 0.684669998595952 9 0.1264652177374177 0.6233203729682758 >10 0.7254037804532975 7.532426079959962 >50 0.08914654285148668 3.4620114002098155 >100 0.10461665943690053 12.322907196986993 >500 0.011890870605692326 4.380249014532158 >1k 0.003618960618921297 2.610129854781 >5k 1.148876386959142E-4 0.48710679367758225 >10k+ 1.148876386959142E-4 0.6912738752435542 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11454 0.35946590409095674 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10520 0.33015377257175355 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9279 0.2912069254461313 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6205 0.1947342356281113 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.138343845739102E-5 0.0 2 0.0 0.0 0.0 7.218190845199935E-4 0.0 3 0.0 0.0 0.0 0.0010356534690939036 0.0 4 0.0 0.0 0.0 0.0017260891151565062 0.0 5 0.0 0.0 0.0 0.0019457731843582431 0.0 6 0.0 0.0 0.0 0.001977156622815634 0.0 7 0.0 0.0 0.0 0.0022909910073895443 0.0 8 0.0 0.0 0.0 0.0026048253919634546 0.0 9 6.276687691478204E-5 0.0 0.0 0.0047388992070660435 0.0 10 6.276687691478204E-5 0.0 0.0 0.007940009929719927 0.0 11 6.276687691478204E-5 0.0 0.0 0.008818746206526876 0.0 12 6.276687691478204E-5 0.0 0.0 0.009571948729504261 0.0 13 6.276687691478204E-5 0.0 0.0 0.010262384375566863 0.0 14 6.276687691478204E-5 0.0 0.0 0.011329421283118158 0.0 15 6.276687691478204E-5 0.0 0.0 0.012616142259871189 0.0 16 6.276687691478204E-5 3.138343845739102E-5 0.0 0.014436381690399869 0.0 17 6.276687691478204E-5 3.138343845739102E-5 0.0 0.016790139574704196 0.0 18 6.276687691478204E-5 3.138343845739102E-5 0.0 0.018076860551457227 0.0 19 6.276687691478204E-5 3.138343845739102E-5 0.0 0.020179550928102426 0.0 20 6.276687691478204E-5 3.138343845739102E-5 0.0 0.021403505027940674 0.0 21 6.276687691478204E-5 3.138343845739102E-5 0.0 0.024730149504424124 0.0 22 6.276687691478204E-5 3.138343845739102E-5 0.0 0.030253634672924943 0.0 23 6.276687691478204E-5 6.276687691478204E-5 0.0 0.03756597583349705 0.0 24 6.276687691478204E-5 6.276687691478204E-5 0.0 0.05096670405480302 0.0 25 6.276687691478204E-5 6.276687691478204E-5 0.0 0.05507793449272124 0.0 26 6.276687691478204E-5 6.276687691478204E-5 0.0 0.06276687691478204 0.0 27 6.276687691478204E-5 6.276687691478204E-5 0.0 0.08078097058932449 0.0 28 6.276687691478204E-5 6.276687691478204E-5 0.0 0.1205437871148389 0.0 29 6.276687691478204E-5 9.415031537217306E-5 0.0 0.17847761450718272 0.0 30 6.276687691478204E-5 9.415031537217306E-5 0.0 0.2629618308344793 0.0 31 6.276687691478204E-5 9.415031537217306E-5 0.0 0.5644939075330923 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5415 0.0 19.371191 1 CTTATAC 2395 0.0 16.530272 37 AAGACGG 555 0.0 16.333334 5 TATACTG 470 0.0 16.138298 5 CGGACCA 545 0.0 15.614678 9 GACGGAC 530 0.0 15.009434 7 TCTAGCG 420 0.0 14.97619 28 ACGGACC 585 0.0 14.863248 8 TCTATAC 325 0.0 14.800001 3 TTAACGG 140 6.0039747E-7 14.535714 35 CAAGACG 625 0.0 14.504 4 CTAGCGG 450 0.0 14.388887 29 TAATACT 610 0.0 14.254098 4 CGAACGA 340 0.0 14.147059 16 GTATTAG 655 0.0 14.122138 1 GCGCAAG 605 0.0 14.066116 1 GCGAAAG 585 0.0 13.914531 18 GTACCGA 80 0.006301854 13.875 6 TCTTATA 3655 0.0 13.818057 37 CGTTTAG 215 1.9826984E-10 13.767442 26 >>END_MODULE