ERR1630731.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1630731.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	938564
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6398	0.681679672350527	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	5207	0.5547836908298209	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	4992	0.5318763557945969	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4042	0.43065789866221166	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1186	0.1263632527989567	No Hit
ACCTAGGCCTGGTCAGCATGTTGATGTATCTACGGAGATCAGC	1151	0.12263415174671093	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1126	0.11997050813796395	No Hit
GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCA	1028	0.10952902519167579	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1010	0.10761120179337796	No Hit
GGCCTAGGTATGGGAAAAGACACAAAGAGGACACGCTGGCCTT	992	0.10569337839508015	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATTA	35	2.3878452E-5	31.714285	15
CCGAATT	55	5.1421276E-4	20.181818	14
TAGACAG	70	1.21889505E-4	18.5	5
AACATCG	145	1.546141E-10	17.862068	21
TACGACG	90	4.4445587E-5	16.444445	5
AGTCGGT	170	8.54925E-11	16.323528	11
TAGAACA	80	3.3817376E-4	16.1875	4
CCCCGAA	80	3.3817376E-4	16.1875	12
ATGGTCG	80	3.3817376E-4	16.1875	36
AGTCGCC	80	3.3817376E-4	16.1875	17
CCCGAAT	80	3.3817376E-4	16.1875	13
TTAGACA	105	9.339368E-6	15.857142	4
CAGTCCG	70	0.0025920188	15.857142	9
GCATCGC	70	0.0025920188	15.857142	14
TCGGGAT	130	2.587276E-7	15.653845	4
TAACGAA	95	7.0574686E-5	15.578948	13
TACAGAG	180	2.0190782E-10	15.416666	5
CGAACGA	85	5.36285E-4	15.235293	16
TACGCTA	85	5.36285E-4	15.235293	26
TCGTATT	85	5.36285E-4	15.235293	26