FastQCFastQC Report
Fri 10 Feb 2017
ERR1630720.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630720.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1786
Sequences flagged as poor quality0
Sequence length43
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT150.8398656215005599No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT140.7838745800671892No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.6718924972004479No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT80.4479283314669653No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA50.2799552071668533No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC40.22396416573348266No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.22396416573348266No Hit
GTACATGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAA40.22396416573348266No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG40.22396416573348266No Hit
GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.16797312430011196No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGG30.16797312430011196No Hit
GAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTA30.16797312430011196No Hit
TCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCAC30.16797312430011196No Hit
CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGT30.16797312430011196No Hit
GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTG30.16797312430011196No Hit
GTATTAATCTCTATCTTTCAAAGAGAAAAAAACTTATCTGCGG20.11198208286674133No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT20.11198208286674133No Hit
GCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACC20.11198208286674133No Hit
GAGTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAA20.11198208286674133No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT20.11198208286674133No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG20.11198208286674133No Hit
GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA20.11198208286674133No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC20.11198208286674133No Hit
CCCATAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.11198208286674133No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.11198208286674133No Hit
GCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCC20.11198208286674133No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.11198208286674133No Hit
ATGTAAATTATTCCGATCTGACATATCTGCATTATAATAATAG20.11198208286674133No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGA20.11198208286674133No Hit
CCCGGGGAGGTAGTGACGAAAAAAAAAAAAAAAAAAAAAAAAA20.11198208286674133No Hit
GCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGAT20.11198208286674133No Hit
GTCCTGCCATCAATGTGGCCGTGCATGTGTTCAGAAAGGCTGC20.11198208286674133No Hit
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAAT20.11198208286674133No Hit
GGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACAGGT20.11198208286674133No Hit
GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGC20.11198208286674133No Hit
TTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCAT20.11198208286674133No Hit
CACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGA20.11198208286674133No Hit
GAGCAGTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTA20.11198208286674133No Hit
GGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.11198208286674133No Hit
CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.11198208286674133No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA20.11198208286674133No Hit
GGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC20.11198208286674133No Hit
CAGCAGAAATGAAAAGCATTTACTTTGTGGCTGGATTATTTGT20.11198208286674133No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT20.11198208286674133No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG20.11198208286674133No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGC20.11198208286674133No Hit
CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCTT20.11198208286674133No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC20.11198208286674133No Hit
CTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGC20.11198208286674133No Hit
ATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTT20.11198208286674133No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC20.11198208286674133No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC20.11198208286674133No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.11198208286674133No Hit
GTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAAC20.11198208286674133No Hit
GGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACTAGT20.11198208286674133No Hit
GAATAACATTGCCAAACGTCACGATGAATTTGAGAGACATGCT20.11198208286674133No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCT20.11198208286674133No Hit
CTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACAC20.11198208286674133No Hit
GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCAT20.11198208286674133No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)