##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630716.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1963620 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78481732718143 31.0 31.0 34.0 30.0 34.0 2 31.953287295912652 33.0 31.0 34.0 30.0 34.0 3 32.05355109440727 33.0 31.0 34.0 30.0 34.0 4 35.6852853403408 37.0 35.0 37.0 33.0 37.0 5 35.651664782391705 37.0 35.0 37.0 33.0 37.0 6 35.68674438027724 37.0 35.0 37.0 33.0 37.0 7 35.66624601501309 37.0 35.0 37.0 33.0 37.0 8 35.65815840132001 37.0 35.0 37.0 33.0 37.0 9 37.35058310671108 39.0 37.0 39.0 34.0 39.0 10 37.22273046719834 39.0 37.0 39.0 34.0 39.0 11 37.353012293620964 39.0 37.0 39.0 34.0 39.0 12 37.26766380460578 39.0 37.0 39.0 34.0 39.0 13 37.32835884743484 39.0 37.0 39.0 34.0 39.0 14 38.53051914321508 40.0 38.0 41.0 34.0 41.0 15 38.50636783084303 40.0 38.0 41.0 34.0 41.0 16 38.482808282661615 40.0 38.0 41.0 34.0 41.0 17 38.46537721147676 40.0 38.0 41.0 34.0 41.0 18 38.454561473197465 40.0 38.0 41.0 34.0 41.0 19 38.48722512502419 40.0 38.0 41.0 34.0 41.0 20 38.470031370631794 40.0 38.0 41.0 34.0 41.0 21 38.38762998950917 40.0 38.0 41.0 34.0 41.0 22 38.325415304386794 40.0 38.0 41.0 34.0 41.0 23 38.2827069392245 40.0 38.0 41.0 34.0 41.0 24 38.231962905246434 40.0 38.0 41.0 34.0 41.0 25 38.188679072325606 40.0 38.0 41.0 33.0 41.0 26 37.98460343651012 40.0 37.0 41.0 33.0 41.0 27 37.85063250527088 40.0 37.0 41.0 33.0 41.0 28 37.741692893737074 40.0 37.0 41.0 33.0 41.0 29 37.63336236135301 40.0 37.0 41.0 32.0 41.0 30 37.5602942524521 40.0 37.0 41.0 32.0 41.0 31 37.513079414550674 40.0 37.0 41.0 32.0 41.0 32 37.41010022305741 40.0 36.0 41.0 32.0 41.0 33 37.36392479196586 40.0 36.0 41.0 32.0 41.0 34 37.289950703292895 39.0 36.0 41.0 31.0 41.0 35 37.23332569438079 39.0 36.0 41.0 31.0 41.0 36 37.18634002505576 39.0 36.0 41.0 31.0 41.0 37 36.99599973518298 39.0 36.0 41.0 31.0 41.0 38 36.87365070634848 39.0 35.0 41.0 30.0 41.0 39 36.80810085454416 39.0 35.0 41.0 30.0 41.0 40 36.69297012660291 39.0 35.0 41.0 30.0 41.0 41 36.560365040079034 39.0 35.0 41.0 30.0 41.0 42 36.463369185483955 39.0 35.0 41.0 30.0 41.0 43 35.614741650624865 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 1.0 10 5.0 11 5.0 12 3.0 13 3.0 14 4.0 15 7.0 16 12.0 17 51.0 18 95.0 19 212.0 20 415.0 21 786.0 22 1377.0 23 2258.0 24 3901.0 25 5930.0 26 8988.0 27 12932.0 28 18587.0 29 24765.0 30 33792.0 31 43378.0 32 55247.0 33 71093.0 34 92339.0 35 122579.0 36 172199.0 37 263229.0 38 479640.0 39 549785.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.22460557541683 19.918161355048326 12.366649351707562 24.490583717827278 2 19.1803913180758 21.32877033234536 34.43609252299324 25.054745826585588 3 20.766186940446726 23.676271376335546 29.338161151342927 26.219380531874805 4 14.697446552795348 15.599403143174342 34.42203685030709 35.28111345372322 5 14.318198022020553 37.31567207504507 34.04935781872256 14.316772084211813 6 34.77261384585612 34.793340870433184 15.616565323229544 14.817479960481153 7 28.684572371436428 30.825770770311973 21.638962732096843 18.850694126154753 8 27.199610922683615 33.0530347012151 20.294405231154705 19.452949144946576 9 26.591041036453085 13.725313451686173 20.545777696295616 39.13786781556513 10 17.20139334494454 26.636518267281854 33.01713162424502 23.144956763528583 11 35.382100406392276 21.734653344333424 21.58915676149153 21.29408948778277 12 21.576374247563173 26.12501400474634 28.927236430673958 23.37137531701653 13 29.59926054939347 20.07292653364704 25.871502632892312 24.456310284067182 14 22.884977745184916 21.767042503131968 25.47152707754046 29.876452674142655 15 25.726719018954785 27.96696916918752 22.90361678939917 23.40269502245852 16 25.246585388211567 26.56756398895917 24.435532333139815 23.75031828968945 17 23.33812041026268 26.57326774019413 25.920442855542312 24.168168994000876 18 23.251596541082286 24.805257636406232 27.731740357095568 24.21140546541592 19 23.57798352023304 25.649260040129963 27.334005561157454 23.438750878479542 20 24.391328261068843 24.715983744308982 27.32178323708253 23.570904757539644 21 25.037532720180078 25.40679968629368 26.411780283354215 23.14388731017203 22 24.740683024210387 25.099764720261557 26.722685652010064 23.43686660351799 23 23.748281235676963 25.170756052596733 27.13788818610525 23.943074525621046 24 23.744359906702925 25.891058351412187 26.781862071072815 23.58271967081207 25 24.11912691865025 25.351035332701848 26.754769252706733 23.77506849594117 26 23.778989824915207 26.283700512319086 26.717185606176347 23.220124056589363 27 24.426467442784244 25.277599535551687 26.46224829651358 23.833684725150487 28 23.43681567716768 25.488230920442856 27.44130738126521 23.63364602112425 29 22.895264867947972 25.912803902995492 27.461474215988837 23.730457013067703 30 22.929894786160254 26.567360283557917 27.336704657724 23.16604027255783 31 23.70305863659975 26.390696774324972 26.377659628645056 23.528584960430226 32 23.028029863211824 25.841761644309997 26.645939642089612 24.484268850388567 33 22.86878316578564 25.639431254519714 27.44303887717583 24.048746702518816 34 23.789684358480763 25.3504242164981 27.130656644360922 23.72923478066021 35 23.665016652916552 25.320886933317038 27.73780059278272 23.276295820983695 36 22.87993603650401 26.119870443364807 27.04092441511087 23.95926910502032 37 23.792536234098247 25.218270337438 27.108809240077004 23.880384188386756 38 22.952353306647925 25.106690703904018 27.890019453865822 24.05093653558224 39 23.26030494698567 24.997199050732828 27.666045365192858 24.07645063708864 40 22.684022366853057 25.095588759535957 28.43615363461362 23.78423523899736 41 22.14262433668429 25.209765636935867 28.853546001772234 23.79406402460761 42 22.896945437508275 25.12023711308705 28.56331673134313 23.41950071806154 43 22.095313757244273 24.429319318401728 28.662979598904066 24.812387325449933 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 377.0 1 361.5 2 346.0 3 846.0 4 1346.0 5 1346.0 6 1881.0 7 2416.0 8 2270.5 9 2125.0 10 3192.0 11 4259.0 12 4259.0 13 7378.5 14 10498.0 15 13808.5 16 17119.0 17 17252.0 18 17385.0 19 17385.0 20 20800.5 21 24216.0 22 23820.5 23 23425.0 24 26592.0 25 29759.0 26 29759.0 27 33925.5 28 38092.0 29 44936.5 30 51781.0 31 57467.0 32 63153.0 33 63153.0 34 69516.0 35 75879.0 36 83193.0 37 90507.0 38 97383.5 39 104260.0 40 104260.0 41 109174.5 42 114089.0 43 114423.0 44 114757.0 45 117406.5 46 120056.0 47 120056.0 48 124098.5 49 128141.0 50 127881.0 51 127621.0 52 133502.0 53 139383.0 54 139383.0 55 135369.5 56 131356.0 57 125567.5 58 119779.0 59 111996.5 60 104214.0 61 104214.0 62 96782.5 63 89351.0 64 79531.5 65 69712.0 66 60460.0 67 51208.0 68 51208.0 69 43352.5 70 35497.0 71 30664.5 72 25832.0 73 19991.5 74 14151.0 75 14151.0 76 10889.0 77 7627.0 78 6384.0 79 5141.0 80 4209.0 81 3277.0 82 3277.0 83 2539.0 84 1801.0 85 1656.5 86 1512.0 87 1429.0 88 1346.0 89 1346.0 90 1024.5 91 703.0 92 394.0 93 85.0 94 56.0 95 27.0 96 27.0 97 18.0 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1963620.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.85881944293049 #Duplication Level Percentage of deduplicated Percentage of total 1 86.60224372880184 50.10703583257404 2 8.506703423615686 9.843756348830771 3 2.017908398973885 3.502613931258089 4 0.8098831911182311 1.8743554129909639 5 0.44229847760187513 1.2795433877724967 6 0.28038768045563656 0.973374010650286 7 0.1762063595160738 0.7136564357955627 8 0.12584693942558806 0.5825084276536409 9 0.10789181811910846 0.5618243901530693 >10 0.7114985768174386 8.271572768769717 >50 0.11010677815035741 4.468439570776593 >100 0.09807899567870038 11.570992867434809 >500 0.007767867676248664 2.9785591571128727 >1k 0.0029129503785932493 2.3049614766745727 >5k 2.648136707812044E-4 0.9668059815525838 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7414 0.3775679612144916 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6102 0.31075258960491337 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5414 0.2757152605901345 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3817 0.19438587914158545 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 2229 0.11351483484584594 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 2065 0.10516291339464866 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 2044 0.1040934600380929 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 5.092635031217853E-5 0.0 5.601898534339638E-4 0.0 3 0.0 5.092635031217853E-5 0.0 0.0012731587578044632 0.0 4 5.092635031217853E-5 5.092635031217853E-5 0.0 0.0017824222609262484 0.0 5 5.092635031217853E-5 5.092635031217853E-5 0.0 0.001935201311862784 0.0 6 5.092635031217853E-5 5.092635031217853E-5 0.0 0.001935201311862784 0.0 7 5.092635031217853E-5 5.092635031217853E-5 0.0 0.002138906713111498 0.0 8 5.092635031217853E-5 5.092635031217853E-5 0.0 0.0023426121143602123 0.0 9 5.092635031217853E-5 5.092635031217853E-5 0.0 0.00346299182122814 0.0 10 5.092635031217853E-5 5.092635031217853E-5 0.0 0.005245414082154389 0.0 11 5.092635031217853E-5 5.092635031217853E-5 0.0 0.005805603935588352 0.0 12 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.006365793789022316 0.0 13 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.006773204591519744 0.0 14 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.007180615394017173 0.0 15 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.00799543699901203 0.0 16 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.009879711960562634 0.0 17 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.012375103125859382 0.0 18 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.013393630132102952 0.0 19 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.015074199692404843 0.0 20 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.01670384290239456 0.0 21 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.019861276621749625 0.0 22 1.0185270062435706E-4 5.092635031217853E-5 0.0 0.025412248805777086 0.0 23 1.0185270062435706E-4 1.5277905093653558E-4 0.0 0.0332039804035404 0.0 24 1.0185270062435706E-4 1.5277905093653558E-4 0.0 0.044713335574092745 0.0 25 1.0185270062435706E-4 1.5277905093653558E-4 0.0 0.04858373819781832 0.0 26 1.0185270062435706E-4 1.5277905093653558E-4 0.0 0.0559680589930842 0.0 27 1.0185270062435706E-4 1.5277905093653558E-4 0.0 0.06788482496613397 0.0 28 1.0185270062435706E-4 2.0370540124871412E-4 0.0 0.09355170552347196 0.0 29 1.0185270062435706E-4 2.5463175156089263E-4 0.0 0.13505668102789745 0.0 30 1.0185270062435706E-4 2.5463175156089263E-4 0.0 0.19840906081624754 0.0 31 1.0185270062435706E-4 2.5463175156089263E-4 0.0 0.4196331265723511 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3165 0.0 21.451817 1 ACCGAGT 60 9.239992E-4 18.5 8 CGAATAC 50 0.007036615 18.499998 23 ACCGTTA 50 0.007036615 18.499998 8 GCTACGT 50 0.007036615 18.499998 13 CGAATTA 75 2.0682064E-4 17.266666 15 TAATACT 360 0.0 16.444445 4 GCGCAAG 585 0.0 16.444445 1 CAAGACG 540 0.0 16.444443 4 AAGACGG 530 0.0 16.40566 5 ATACCGT 380 0.0 16.06579 6 TACCGTC 335 0.0 16.014925 7 CGCAAGA 595 0.0 15.857143 2 ATTACGT 140 3.4768163E-8 15.857142 17 CTTAACG 120 1.9371018E-6 15.416667 30 GACGGAC 565 0.0 15.3893795 7 TTAGACT 145 5.351285E-8 15.310346 4 TCTTATA 1720 0.0 14.843023 37 CTTATAC 1110 0.0 14.833333 37 TCTAGCG 350 0.0 14.8 28 >>END_MODULE