##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630712.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1434554 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94500032762796 33.0 31.0 34.0 30.0 34.0 2 32.10439342123057 33.0 31.0 34.0 30.0 34.0 3 32.21647355205869 34.0 31.0 34.0 30.0 34.0 4 35.804061053121735 37.0 35.0 37.0 35.0 37.0 5 35.78251846915487 37.0 35.0 37.0 35.0 37.0 6 35.82495674613852 37.0 35.0 37.0 35.0 37.0 7 35.79881133787923 37.0 35.0 37.0 35.0 37.0 8 35.80188964653823 37.0 35.0 37.0 35.0 37.0 9 37.514212779721085 39.0 37.0 39.0 35.0 39.0 10 37.42375748839012 39.0 37.0 39.0 34.0 39.0 11 37.53681841185483 39.0 37.0 39.0 35.0 39.0 12 37.467595503550235 39.0 37.0 39.0 35.0 39.0 13 37.52390499068003 39.0 37.0 39.0 35.0 39.0 14 38.769397317912045 40.0 38.0 41.0 35.0 41.0 15 38.74341572363257 40.0 38.0 41.0 35.0 41.0 16 38.71169088092885 40.0 38.0 41.0 35.0 41.0 17 38.72633585072434 40.0 38.0 41.0 35.0 41.0 18 38.72573914958935 40.0 38.0 41.0 35.0 41.0 19 38.75797704373624 40.0 38.0 41.0 35.0 41.0 20 38.748497442410674 40.0 38.0 41.0 35.0 41.0 21 38.673966961160055 40.0 38.0 41.0 34.0 41.0 22 38.60716571143366 40.0 38.0 41.0 34.0 41.0 23 38.582138420721705 40.0 38.0 41.0 34.0 41.0 24 38.52951300543584 40.0 38.0 41.0 34.0 41.0 25 38.487647031760396 40.0 38.0 41.0 34.0 41.0 26 38.28139128955759 40.0 38.0 41.0 34.0 41.0 27 38.16360137018195 40.0 38.0 41.0 33.0 41.0 28 38.065877617712545 40.0 37.0 41.0 33.0 41.0 29 37.955055020584794 40.0 37.0 41.0 33.0 41.0 30 37.86616188724858 40.0 37.0 41.0 33.0 41.0 31 37.803070501354426 40.0 37.0 41.0 33.0 41.0 32 37.693529138673064 40.0 37.0 41.0 33.0 41.0 33 37.63828060846786 40.0 37.0 41.0 33.0 41.0 34 37.54275684289333 40.0 36.0 41.0 33.0 41.0 35 37.47057412965981 40.0 36.0 41.0 32.0 41.0 36 37.40647058249463 40.0 36.0 41.0 32.0 41.0 37 37.195828111036604 40.0 36.0 41.0 31.0 41.0 38 37.07720866555041 40.0 36.0 41.0 31.0 41.0 39 36.983065119890924 39.0 36.0 41.0 31.0 41.0 40 36.850358369221375 39.0 35.0 41.0 31.0 41.0 41 36.70780395858225 39.0 35.0 41.0 30.0 41.0 42 36.59224748597822 39.0 35.0 41.0 30.0 41.0 43 35.7729489444106 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 4.0 11 5.0 12 4.0 13 1.0 14 0.0 15 3.0 16 3.0 17 21.0 18 50.0 19 98.0 20 197.0 21 427.0 22 771.0 23 1298.0 24 2250.0 25 3615.0 26 5567.0 27 8403.0 28 12073.0 29 16568.0 30 22253.0 31 29206.0 32 37356.0 33 47939.0 34 62402.0 35 83607.0 36 116331.0 37 180216.0 38 314449.0 39 489430.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.86485276957159 19.943968648095506 12.461921963202501 23.729256619130407 2 18.533216595541194 21.52188066813797 34.837238612140084 25.107664124180758 3 20.747633062261862 24.381863631484073 29.29879251669857 25.571710789555503 4 14.174788819382192 15.763505591284819 34.80433640002398 35.25736918930901 5 13.9481678626249 37.96978015466828 33.99049460668612 14.091557376020699 6 34.090107448029144 34.738113727332674 16.162305497039497 15.009473327598682 7 28.26585823886727 31.2607960383506 22.023987943291086 18.449357779491045 8 27.680589228429188 32.81354344277037 20.408782102311935 19.09708522648851 9 26.729492232429035 13.814049523405881 21.114436960895162 38.34202128326992 10 17.49324180198166 27.3353948335162 32.80587555435348 22.36548781014866 11 34.191044742825994 22.51940324309855 22.005027346478418 21.284524667597037 12 21.76181586751004 26.638314068344588 29.382511916595682 22.21735814754969 13 29.64572961352448 20.55217161570774 26.185560111365625 23.616538659402156 14 22.406894407599854 21.916776921607692 26.7342323816322 28.942096289160258 15 25.35931028040771 28.172728248640343 23.784953372267616 22.68300809868433 16 24.011783453254463 27.023451191101906 25.783623342167672 23.181142013475966 17 22.570708387415184 27.26903274467186 26.83035981914937 23.32989904876359 18 22.36005058018032 25.579448386048902 28.778003477038855 23.28249755673192 19 23.048069295404705 26.187511937508102 28.861583460782935 21.902835306304258 20 23.7942245464444 25.349899690077894 28.339330551516362 22.516545211961347 21 24.172112029243934 25.74646893738402 27.8398721832709 22.241546850101145 22 23.919071711486637 25.741310539721752 27.96506788869572 22.37454986009589 23 23.221363573626366 25.78996677713073 27.882812358405467 23.10585729083743 24 22.76596070973975 26.464462125510785 28.054015394331618 22.715561770417843 25 23.06486894184534 26.221947727307583 27.83485320176166 22.878330129085416 26 22.80186036914609 26.84395289407021 27.86949811579069 22.484688620993005 27 23.082714209433732 26.122474302117592 27.85520796010467 22.939603528344 28 22.452553197718593 26.449962845595216 28.26815860539234 22.829325351293853 29 22.280234832568173 26.918052579407952 28.547897116455704 22.253815471568167 30 22.406824699523337 26.9738887486982 28.073463947679905 22.545822604098557 31 22.28692680791382 27.227556439144152 27.900239377534756 22.58527737540727 32 21.96543315901667 26.66340897589076 28.058825251611303 23.312332613481264 33 21.763837401729038 26.783864532112418 28.444241206674686 23.00805685948385 34 22.96713821856828 26.042867678734993 28.101695718669355 22.88829838402737 35 22.304214410890076 26.14896337119411 28.410851038022965 23.135971179892845 36 21.86526265306151 26.7244732509198 28.229470622925312 23.18079347309338 37 22.310418429700103 25.65013237563731 28.67678734993594 23.362661844726652 38 21.959159432130125 25.597642194019883 28.991170775028337 23.452027598821655 39 21.934901021502153 25.49928409805417 29.250484819672177 23.3153300607715 40 21.2466034739717 25.454949761389255 29.751197933294947 23.5472488313441 41 20.71424289361014 25.652781282544957 30.09541641513669 23.537559408708212 42 21.054209182784337 25.681431301993513 30.092349259769936 23.172010255452218 43 20.849546270129952 25.312954409523797 29.827110028622133 24.010389291724117 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 850.0 1 687.5 2 525.0 3 1195.0 4 1865.0 5 1865.0 6 2468.0 7 3071.0 8 2884.0 9 2697.0 10 4142.5 11 5588.0 12 5588.0 13 9038.0 14 12488.0 15 16338.5 16 20189.0 17 19626.5 18 19064.0 19 19064.0 20 21910.0 21 24756.0 22 23230.0 23 21704.0 24 24062.0 25 26420.0 26 26420.0 27 29450.0 28 32480.0 29 36219.5 30 39959.0 31 44116.5 32 48274.0 33 48274.0 34 53308.5 35 58343.0 36 63127.5 37 67912.0 38 72004.0 39 76096.0 40 76096.0 41 78727.0 42 81358.0 43 83259.5 44 85161.0 45 86097.0 46 87033.0 47 87033.0 48 90023.5 49 93014.0 50 92026.5 51 91039.0 52 89838.0 53 88637.0 54 88637.0 55 85955.0 56 83273.0 57 80081.5 58 76890.0 59 74673.5 60 72457.0 61 72457.0 62 66881.0 63 61305.0 64 55207.0 65 49109.0 66 42575.5 67 36042.0 68 36042.0 69 31327.0 70 26612.0 71 22619.5 72 18627.0 73 14106.0 74 9585.0 75 9585.0 76 7176.5 77 4768.0 78 3819.0 79 2870.0 80 2358.5 81 1847.0 82 1847.0 83 1425.5 84 1004.0 85 858.5 86 713.0 87 633.5 88 554.0 89 554.0 90 436.0 91 318.0 92 182.0 93 46.0 94 25.5 95 5.0 96 5.0 97 5.0 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1434554.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.45409099028188 #Duplication Level Percentage of deduplicated Percentage of total 1 88.33597058791169 56.93614685988124 2 7.42052900104007 9.565669028581244 3 1.7100720915357832 3.3066342656336705 4 0.6920587553482418 1.7842407195134722 5 0.3842099676570839 1.2381952107371472 6 0.2510525966162874 0.9708820143391635 7 0.16764724076025783 0.7563885357161948 8 0.13194900836797716 0.6803722713141653 9 0.10067951761243321 0.5840286110144511 >10 0.6457894908026525 8.25067343576118 >50 0.0830072895212255 3.767576651373652 >100 0.07345904898960062 8.827592342686527 >500 0.0026002936994090533 1.1382105573728885 >1k 6.500734248522633E-4 0.7223541324906533 >5k 3.2503671242613166E-4 1.4710353635842623 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7668 0.5345215307335939 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7386 0.5148638531557543 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6011 0.41901524794465733 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4575 0.31891445006601354 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.091242295514843E-4 0.0 3 0.0 0.0 0.0 6.970807651716143E-4 0.0 4 0.0 0.0 0.0 0.0018821180659633586 0.0 5 0.0 0.0 0.0 0.0020912422955148427 0.0 6 0.0 0.0 0.0 0.0020912422955148427 0.0 7 0.0 0.0 0.0 0.0023700746015834885 0.0 8 0.0 0.0 0.0 0.00243978267810065 0.0 9 0.0 0.0 0.0 0.004043068437995363 0.0 10 0.0 0.0 0.0 0.005785770350924399 0.0 11 0.0 6.970807651716143E-5 0.0 0.007667888416887757 0.0 12 0.0 6.970807651716143E-5 0.0 0.00968942263588544 0.0 13 0.0 6.970807651716143E-5 0.0 0.010525919554091377 0.0 14 0.0 6.970807651716143E-5 0.0 0.012338329543537573 0.0 15 6.970807651716143E-5 6.970807651716143E-5 0.0 0.014847820298155385 0.0 16 6.970807651716143E-5 6.970807651716143E-5 0.0 0.01993650988390817 0.0 17 6.970807651716143E-5 6.970807651716143E-5 0.0 0.027325565994727283 0.0 18 6.970807651716143E-5 6.970807651716143E-5 0.0 0.03004418097889658 0.0 19 6.970807651716143E-5 6.970807651716143E-5 0.0 0.03464491402902923 0.0 20 6.970807651716143E-5 6.970807651716143E-5 0.0 0.03861827439050743 0.0 21 6.970807651716143E-5 6.970807651716143E-5 0.0 0.04837740510291003 0.0 22 1.3941615303432285E-4 6.970807651716143E-5 0.0 0.06447997077837432 0.0 23 1.3941615303432285E-4 6.970807651716143E-5 0.0 0.09041137524275837 0.0 24 1.3941615303432285E-4 6.970807651716143E-5 0.0 0.13021468693405755 0.0 25 1.3941615303432285E-4 6.970807651716143E-5 0.0 0.14032235802904597 0.0 26 1.3941615303432285E-4 6.970807651716143E-5 0.0 0.15712200446968186 0.0 27 1.3941615303432285E-4 6.970807651716143E-5 0.0 0.18535377545913226 0.0 28 2.091242295514843E-4 6.970807651716143E-5 0.0 0.24606951010557984 0.0 29 2.091242295514843E-4 6.970807651716143E-5 0.0 0.3357838045831666 0.0 30 2.091242295514843E-4 6.970807651716143E-5 0.0 0.46732294497105026 0.0 31 2.091242295514843E-4 6.970807651716143E-5 0.0 0.8678655526386598 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCTTA 90 2.152974E-6 18.5 25 CAGTCGG 290 0.0 18.5 10 AGTCGGT 290 0.0 18.5 11 GCTACGA 85 2.7238788E-5 17.411764 2 GGTATCA 3805 0.0 17.211563 1 CGAACTA 130 1.3938916E-8 17.076923 24 GCAGTCG 315 0.0 17.031746 9 CGCTTAT 100 5.879836E-6 16.65 26 GTCGGTG 315 0.0 16.444445 12 CTAGGAC 170 8.54925E-11 16.323528 3 TCGTTCT 210 0.0 15.857142 30 CGTCAAT 215 0.0 15.488372 24 GACGGAC 240 0.0 15.416666 7 GACACGC 380 0.0 15.092106 30 TCTAGCG 135 3.973837E-7 15.074073 28 CTTATAC 1475 0.0 15.050847 37 CTAGGTA 415 0.0 14.710843 4 TCGGTGA 355 0.0 14.591549 13 CGGACCA 255 0.0 14.509804 9 TAGACAG 195 6.730261E-10 14.23077 5 >>END_MODULE