FastQCFastQC Report
Fri 10 Feb 2017
ERR1630705.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630705.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1752
Sequences flagged as poor quality0
Sequence length43
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT120.684931506849315No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT80.45662100456621No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT70.3995433789954338No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.28538812785388123No Hit
GTATTAATCTCTATCTTTCAAAGAGAAAAAAACTTATCTGCGG40.228310502283105No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT40.228310502283105No Hit
GGATCACTGAGTGGGTCTGCCTGGGAAGCTGAGAATGATCTGG30.17123287671232876No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT30.17123287671232876No Hit
CCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCGGTTC30.17123287671232876No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC30.17123287671232876No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT20.1141552511415525No Hit
ACACAACACTAAAAGAAAATTTATTTATTGGCATGCAAAGCAA20.1141552511415525No Hit
ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACT20.1141552511415525No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA20.1141552511415525No Hit
GAACATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA20.1141552511415525No Hit
ACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAG20.1141552511415525No Hit
GCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG20.1141552511415525No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1141552511415525No Hit
CCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGG20.1141552511415525No Hit
GACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTC20.1141552511415525No Hit
GTACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC20.1141552511415525No Hit
GTCGTAAACCCTATTGTTGATATGGACTCTAGAATAGGATTGC20.1141552511415525No Hit
CTTTATAAACTGGTTGATTCAGACCAAAATCACTGACAGGAAA20.1141552511415525No Hit
AGATGATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATT20.1141552511415525No Hit
TTTAGGTAGTGGGTGTTGAGCTTGAACGCTTTCTTAATTGGTG20.1141552511415525No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGTCTGGT20.1141552511415525No Hit
GAGCCAAGGGTGCAGAGGGGAGAGCTGGGCTGGCGCTGCTCAT20.1141552511415525No Hit
AGTGTACCCAGGGGACAATGCCACACCAGAGCAGATGGCCCAG20.1141552511415525No Hit
GGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCG20.1141552511415525No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG20.1141552511415525No Hit
GAGCAAGCCCTCTTTGGGAACTTTTGATGTGCTCTGTGTCCTA20.1141552511415525No Hit
ATGCTAACTAGTTACGCGACCCCCGAGCGGTCGGCGTCCCCCA20.1141552511415525No Hit
GCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTG20.1141552511415525No Hit
GTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGT20.1141552511415525No Hit
CTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGAC20.1141552511415525No Hit
GCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGC20.1141552511415525No Hit
GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTC20.1141552511415525No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC20.1141552511415525No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTAC20.1141552511415525No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGG20.1141552511415525No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1141552511415525No Hit
GCCAAGCAATGAATTCCTTGGCAGCTTGGCCTTCCAAATAAGA20.1141552511415525No Hit
CCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCC20.1141552511415525No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1141552511415525No Hit
TTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCC20.1141552511415525No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)