##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630699.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 630729 Sequences flagged as poor quality 0 Sequence length 43 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96629455756751 33.0 31.0 34.0 30.0 34.0 2 32.00981404057844 33.0 31.0 34.0 30.0 34.0 3 32.01963600849176 33.0 31.0 34.0 30.0 34.0 4 35.702182712385195 37.0 35.0 37.0 33.0 37.0 5 35.73371447959425 37.0 35.0 37.0 35.0 37.0 6 35.8954416238987 37.0 35.0 37.0 35.0 37.0 7 35.816317309018615 37.0 35.0 37.0 35.0 37.0 8 35.8760862430616 37.0 35.0 37.0 35.0 37.0 9 37.469337861427015 39.0 37.0 39.0 35.0 39.0 10 37.40839726728912 39.0 37.0 39.0 34.0 39.0 11 37.57336193515757 39.0 37.0 39.0 35.0 39.0 12 37.52825539970415 39.0 37.0 39.0 35.0 39.0 13 37.5885253413114 39.0 37.0 39.0 35.0 39.0 14 38.59454060301651 40.0 38.0 41.0 34.0 41.0 15 38.57483324851085 40.0 38.0 41.0 34.0 41.0 16 38.46791886848393 40.0 38.0 41.0 34.0 41.0 17 38.671763942992946 40.0 38.0 41.0 35.0 41.0 18 38.80491938693163 40.0 38.0 41.0 35.0 41.0 19 38.95190961569866 40.0 38.0 41.0 35.0 41.0 20 38.960693102743015 40.0 39.0 41.0 35.0 41.0 21 38.9187590867076 40.0 38.0 41.0 35.0 41.0 22 38.770839774292924 40.0 38.0 41.0 35.0 41.0 23 38.68493441715856 40.0 38.0 41.0 35.0 41.0 24 38.581806132269165 40.0 38.0 41.0 35.0 41.0 25 38.50303854745857 40.0 38.0 41.0 34.0 41.0 26 38.22696752487994 40.0 37.0 41.0 34.0 41.0 27 37.991812648538435 40.0 36.0 41.0 34.0 41.0 28 37.86221974889374 40.0 36.0 41.0 33.0 41.0 29 37.65588549123316 39.0 36.0 41.0 33.0 41.0 30 37.3874310520049 39.0 35.0 41.0 33.0 41.0 31 37.0448163949969 39.0 35.0 41.0 33.0 41.0 32 36.708446892405455 38.0 35.0 41.0 32.0 41.0 33 36.406307621815394 38.0 35.0 41.0 31.0 41.0 34 36.154023360270415 38.0 35.0 41.0 31.0 41.0 35 35.886226889837 38.0 35.0 41.0 30.0 41.0 36 35.60290711224631 38.0 35.0 41.0 30.0 41.0 37 35.203656403938936 38.0 35.0 40.0 26.0 41.0 38 34.81937726028136 38.0 35.0 40.0 24.0 41.0 39 34.48049796346767 37.0 35.0 40.0 21.0 41.0 40 34.00805734316957 37.0 34.0 40.0 18.0 41.0 41 33.5980571687682 37.0 33.0 40.0 15.0 41.0 42 33.12731775453483 36.0 33.0 40.0 10.0 41.0 43 32.31575209004184 35.0 33.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 8.0 11 16.0 12 14.0 13 10.0 14 5.0 15 8.0 16 11.0 17 14.0 18 38.0 19 64.0 20 131.0 21 262.0 22 538.0 23 930.0 24 1534.0 25 2498.0 26 3825.0 27 6082.0 28 8616.0 29 11777.0 30 15035.0 31 17840.0 32 21185.0 33 25892.0 34 32641.0 35 40850.0 36 57402.0 37 109156.0 38 123194.0 39 151150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 52.118580246032764 18.818066079092606 14.62085935481007 14.442494320064561 2 17.29538359580739 25.61290189605996 35.675385149565024 21.416329358567626 3 23.58477254098036 29.95406902171931 30.34108151044268 16.120076926857653 4 11.321344032064484 16.745068008605916 31.08387278847175 40.84971517085785 5 10.189479158243874 46.160236805347466 29.184007711711367 14.466276324697294 6 29.079683984722436 32.08398535662702 19.5277210973334 19.30860956131714 7 24.299659600240357 35.90686332799031 20.170627955904994 19.62284911586434 8 35.278384218895916 28.465791171802785 19.703866478313188 16.55195813098811 9 29.318296764537543 9.223137036667096 23.039688994798084 38.41887720399728 10 19.522806149709304 32.76034556838198 27.727756294700264 19.98909198720845 11 29.76016641061375 24.469146019922977 18.43406597762272 27.336621591840554 12 20.775483607064206 34.508481455585525 29.222534559216403 15.493500378133874 13 33.41942419010383 20.22310691279456 28.78272602020836 17.574742876893247 14 23.690998828339904 22.752085285439545 34.098479695717174 19.45843619050337 15 27.592833055083883 24.894685356151374 29.507601521414113 18.004880067350637 16 19.994799668320308 24.91656480041349 32.175149707719164 22.913485823547038 17 16.26578134190754 29.889381969118272 31.925755752470554 21.919080936503633 18 16.54957993052484 22.950268657379 37.34821135543157 23.15194005666459 19 18.698838962533827 25.990877223022885 39.3032506829399 16.007033131503388 20 21.45549039286286 22.179890253975955 40.619346819315425 15.745272533845755 21 23.94911285195385 22.39820905650446 36.11392531499265 17.538752776549043 22 20.896930377388703 24.273816488539453 37.558602823082495 17.270650310989346 23 19.29909675946405 24.914979333437977 36.383454700830306 19.402469206267668 24 17.099895517726313 26.677542970118708 38.55617864407693 17.66638286807805 25 17.303628024080073 26.96292702571152 37.179200575841605 18.554244374366803 26 18.713900898801228 26.470005343023708 37.02905685326027 17.78703690491479 27 16.429718627175856 28.116037157004037 37.64849880059423 17.805745415225875 28 16.267366808883054 27.454263241423817 38.328505586392886 17.949864363300243 29 15.275498669000473 28.476889440631396 38.90101771125158 17.346594179116543 30 15.907465805441007 29.90127297143464 37.841291584816936 16.349969638307417 31 15.8410347391669 30.57049858179979 36.49744977636988 17.091016902663426 32 14.068482660540422 31.437907564104396 38.11050387725949 16.383105898095696 33 14.888327633579557 30.356936180197835 38.25462282533386 16.50011336088875 34 15.224446632388872 30.84177198131052 36.6862788931538 17.24750249314682 35 14.307095440355525 31.454079327254654 36.33715906514525 17.90166616724457 36 14.631799076941126 32.24221496078347 35.37874427844605 17.747241683829344 37 14.189136697377162 32.887341473120784 35.15424215471304 17.769279674789015 38 14.71123097241446 31.638944776599775 35.420442059902115 18.22938219108365 39 14.76592958306975 31.907522882252128 35.62465020634853 17.7018973283296 40 14.076885635510655 31.68333785191421 36.20588239957256 18.033894113002574 41 13.71714317876616 32.76494342261098 35.005842445804774 18.51207095281809 42 13.745840131022991 32.316731908632704 35.63511428838693 18.30231367195737 43 13.373413938474368 32.93807641633729 34.69017597097962 18.998333674208734 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 29.0 1 128.0 2 227.0 3 1190.5 4 2154.0 5 2154.0 6 3346.0 7 4538.0 8 4858.0 9 5178.0 10 7148.5 11 9119.0 12 9119.0 13 15594.5 14 22070.0 15 34339.5 16 46609.0 17 40859.0 18 35109.0 19 35109.0 20 37058.0 21 39007.0 22 27650.5 23 16294.0 24 15231.5 25 14169.0 26 14169.0 27 14751.5 28 15334.0 29 16145.5 30 16957.0 31 17334.5 32 17712.0 33 17712.0 34 17822.5 35 17933.0 36 18538.0 37 19143.0 38 21033.0 39 22923.0 40 22923.0 41 24112.5 42 25302.0 43 26742.5 44 28183.0 45 31199.5 46 34216.0 47 34216.0 48 36219.0 49 38222.0 50 37450.5 51 36679.0 52 34947.5 53 33216.0 54 33216.0 55 34164.5 56 35113.0 57 31652.5 58 28192.0 59 26081.0 60 23970.0 61 23970.0 62 19848.0 63 15726.0 64 12540.5 65 9355.0 66 7745.5 67 6136.0 68 6136.0 69 5173.5 70 4211.0 71 3695.5 72 3180.0 73 2631.0 74 2082.0 75 2082.0 76 1630.0 77 1178.0 78 927.0 79 676.0 80 509.0 81 342.0 82 342.0 83 245.5 84 149.0 85 107.0 86 65.0 87 43.5 88 22.0 89 22.0 90 14.0 91 6.0 92 4.0 93 2.0 94 1.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 630729.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.010050295388744 #Duplication Level Percentage of deduplicated Percentage of total 1 84.1134141710799 46.2708314406797 2 10.001626657457443 11.003799709248696 3 2.6147372637389372 4.315104851625183 4 1.0397472809266282 2.2878620087307007 5 0.5484205183457225 1.5084320148610681 6 0.309279418300999 1.0208085813639918 7 0.2214535174917095 0.8527518394716783 8 0.1575504518823068 0.6933486625685538 9 0.1254032204450544 0.6208593717497548 >10 0.7349914718093141 7.634241101858562 >50 0.07534879838300489 2.905587829459238 >100 0.04994383489578672 5.622826593046513 >500 0.004041697621624265 1.6682989707945806 >1k 0.0028869268725887614 2.556364448632115 >5k 2.886926872588761E-4 1.3654483151729466 >10k+ 8.660780617766285E-4 9.673434260736743 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24014 3.807340395003242 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20531 3.2551222474311468 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16367 2.594933798826437 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8598 1.3631845055483416 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2350 0.3725847392461739 No Hit CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGT 2142 0.3396070261554487 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2021 0.3204228757517095 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 1594 0.252723435897192 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 1509 0.2392469666053091 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1443 0.2287828845669059 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1376 0.2181602558309512 No Hit TCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGTCTT 1352 0.21435513508971366 Illumina PCR Primer Index 10 (95% over 22bp) GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 1172 0.18581672953043224 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 1138 0.1804261418136791 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 976 0.15474157681032583 No Hit ATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATG 951 0.15077790937153673 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 947 0.1501437225813305 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 930 0.1474484287229539 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 904 0.14332621458661327 No Hit GTACATGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAA 872 0.13825272026496324 No Hit ACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCC 758 0.12017839674408502 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 745 0.1181172896759147 No Hit GAACAGTGGTATCAACGCAGAAAAAAAAAAAAAAAAAAAAAAA 677 0.1073361142424084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.002695293858376577 0.0 3 0.0 0.0 0.0 0.00428076083389221 0.0 4 0.0 0.0 0.0 0.00570768111185628 0.0 5 0.0 0.0 0.0 0.0065004145996140975 0.0 6 0.0 0.0 0.0 0.006658961297165661 0.0 7 0.0 0.0 0.0 0.007293148087371914 0.0 8 0.0 0.0 0.0 0.007768788180026604 0.0 9 0.0 0.0 0.0 0.014903389569846956 0.0 10 0.0 0.0 0.0 0.022989271144976686 0.0 11 1.5854669755156336E-4 0.0 0.0 0.028538405559281402 0.0 12 1.5854669755156336E-4 0.0 0.0 0.03377044657848299 0.0 13 1.5854669755156336E-4 0.0 0.0 0.03519736685644707 0.0 14 1.5854669755156336E-4 0.0 0.0 0.038526847505029896 0.0 15 1.5854669755156336E-4 0.0 0.0 0.0493080229385362 0.0 16 1.5854669755156336E-4 0.0 0.0 0.0748340412443379 0.0 17 1.5854669755156336E-4 0.0 0.0 0.10543355387178963 0.0 18 1.5854669755156336E-4 0.0 0.0 0.11764164958326001 0.0 19 1.5854669755156336E-4 0.0 0.0 0.14078946742578827 0.0 20 1.5854669755156336E-4 0.0 0.0 0.15553431029808365 0.0 21 3.170933951031267E-4 0.0 0.0 0.20024447900762452 0.0 22 3.170933951031267E-4 0.0 0.0 0.2823716683393343 0.0 23 3.170933951031267E-4 0.0 0.0 0.41951456172143664 0.0 24 3.170933951031267E-4 0.0 0.0 0.6127829860367924 0.0 25 3.170933951031267E-4 0.0 0.0 0.6559076877708175 0.0 26 3.170933951031267E-4 0.0 0.0 0.7087037380554881 0.0 27 3.170933951031267E-4 0.0 0.0 0.753096813369926 0.0 28 3.170933951031267E-4 0.0 0.0 0.8058928636545966 0.0 29 3.170933951031267E-4 0.0 0.0 0.9113264175263861 0.0 30 3.170933951031267E-4 0.0 0.0 1.0934965730131325 0.0 31 3.170933951031267E-4 0.0 0.0 1.6392143059856135 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCTTT 25 0.005494486 29.6 27 GTACTAG 25 0.005494486 29.6 1 TTAGACC 40 5.9359452E-5 27.75 4 GTTAGAC 35 8.864938E-4 26.428572 3 GTCCTAA 40 0.0019302265 23.125 1 CAGTCGG 540 0.0 21.583334 10 AGTCGGT 540 0.0 21.583334 11 CGCCTTA 460 0.0 20.51087 25 GCAGTCG 570 0.0 20.447369 9 CCGTCTT 210 0.0 20.261906 37 GAAACCG 55 5.139559E-4 20.181818 5 GGAACGC 55 5.139559E-4 20.181818 8 GGCAGTC 600 0.0 20.041666 8 CTCGCCT 455 0.0 19.923077 23 GATTCCT 550 0.0 19.845453 18 CTTATTG 540 0.0 19.527779 28 TCGCCTT 475 0.0 19.473684 24 GCCGTCT 220 0.0 19.340908 36 TCGGTGA 575 0.0 19.304348 13 CGGTGAT 585 0.0 19.290598 14 >>END_MODULE