FastQCFastQC Report
Fri 10 Feb 2017
ERR1630690.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1630690.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3840
Sequences flagged as poor quality0
Sequence length43
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT330.8593750000000001No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT280.7291666666666666No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT270.703125No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT230.5989583333333334No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT80.20833333333333334No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.15625No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.15625No Hit
ATCTAGCACTTTCATATTTTAAAGCTGATATTTTAGCAATATT50.13020833333333331No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.13020833333333331No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC40.10416666666666667No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.10416666666666667No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.10416666666666667No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG40.10416666666666667No Hit
ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAG40.10416666666666667No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)