##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1630683.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1261857 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.059112878876135 33.0 31.0 34.0 30.0 34.0 2 32.23833524717936 33.0 31.0 34.0 30.0 34.0 3 32.33403626559903 34.0 31.0 34.0 30.0 34.0 4 35.91148759328514 37.0 35.0 37.0 35.0 37.0 5 35.870431435574716 37.0 35.0 37.0 35.0 37.0 6 35.9472206438606 37.0 35.0 37.0 35.0 37.0 7 35.90099115826912 37.0 35.0 37.0 35.0 37.0 8 35.90413652260121 37.0 35.0 37.0 35.0 37.0 9 37.60774636111699 39.0 37.0 39.0 35.0 39.0 10 37.52118346215142 39.0 37.0 39.0 35.0 39.0 11 37.61346491718158 39.0 37.0 39.0 35.0 39.0 12 37.570052708032684 39.0 37.0 39.0 35.0 39.0 13 37.6036024684255 39.0 37.0 39.0 35.0 39.0 14 38.901543518798086 40.0 38.0 41.0 36.0 41.0 15 38.913930025351526 40.0 38.0 41.0 36.0 41.0 16 38.87774842949716 40.0 38.0 41.0 35.0 41.0 17 38.871462455729926 40.0 38.0 41.0 35.0 41.0 18 38.86107300589528 40.0 38.0 41.0 35.0 41.0 19 38.93033838224141 40.0 38.0 41.0 35.0 41.0 20 38.90194689255597 40.0 38.0 41.0 35.0 41.0 21 38.864162896429626 40.0 38.0 41.0 35.0 41.0 22 38.79344489906543 40.0 38.0 41.0 35.0 41.0 23 38.73713423945819 40.0 38.0 41.0 35.0 41.0 24 38.68799951183058 40.0 38.0 41.0 34.0 41.0 25 38.63395059820566 40.0 38.0 41.0 34.0 41.0 26 38.501602796513396 40.0 38.0 41.0 34.0 41.0 27 38.376071139598224 40.0 38.0 41.0 34.0 41.0 28 38.286245588842476 40.0 38.0 41.0 34.0 41.0 29 38.212663558549025 40.0 38.0 41.0 34.0 41.0 30 38.11466671738557 40.0 38.0 41.0 33.0 41.0 31 38.059358548551856 40.0 37.0 41.0 33.0 41.0 32 37.95280447784496 40.0 37.0 41.0 33.0 41.0 33 37.873392943891425 40.0 37.0 41.0 33.0 41.0 34 37.80609371743391 40.0 37.0 41.0 33.0 41.0 35 37.741932722963064 40.0 37.0 41.0 33.0 41.0 36 37.70245756848835 40.0 37.0 41.0 33.0 41.0 37 37.565213807903746 40.0 37.0 41.0 33.0 41.0 38 37.40985705987287 40.0 37.0 41.0 32.0 41.0 39 37.33730208732051 40.0 36.0 41.0 32.0 41.0 40 37.16125361273108 40.0 36.0 41.0 31.0 41.0 41 37.0876898095426 40.0 36.0 41.0 31.0 41.0 42 36.95078523160707 40.0 36.0 41.0 31.0 41.0 43 36.18076453988051 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 4.0 12 4.0 13 2.0 14 2.0 15 3.0 16 7.0 17 8.0 18 31.0 19 76.0 20 153.0 21 300.0 22 572.0 23 985.0 24 1563.0 25 2624.0 26 4194.0 27 6131.0 28 9089.0 29 12675.0 30 17303.0 31 22754.0 32 29538.0 33 38592.0 34 50186.0 35 68266.0 36 95324.0 37 150440.0 38 277656.0 39 473370.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.3709207937191 19.883077084011898 12.532957379481195 24.21304474278781 2 18.117504598381593 21.80183649969846 35.694456661888 24.386202240031952 3 20.390345340240614 24.372809280290873 29.91075850908621 25.3260868703823 4 14.298292120264023 15.968053432361987 34.89492073983026 34.838733707543724 5 13.63292354046457 38.05526299731269 34.39652829124061 13.91528517098213 6 33.60602667338692 35.154538113272736 16.309138040205823 14.930297173134516 7 27.800535242899947 31.553258412007068 22.065020045853057 18.58118629923993 8 26.69296124679738 33.84805092811626 20.81567087237302 18.64331695271334 9 26.530264522842128 14.100409158882504 20.928044936946105 38.44128138132926 10 16.7583173053682 27.662088493387127 33.563074104276474 22.016520096968197 11 33.91549121651661 22.586711489495244 22.271382573461178 21.22641472052697 12 20.941517144969676 26.688761087825323 29.998407109521917 22.37131465768308 13 29.24340872222447 20.790866159953147 26.44800480561585 23.51772031220653 14 22.368144726383417 22.07849225387663 26.695021702142157 28.858341317597798 15 24.94545736957516 28.281730814188926 24.008742670524473 22.764069145711442 16 23.957627528317392 27.4029466096396 25.406127635698816 23.23329822634419 17 22.321705232843343 27.52300775761437 26.967001807653325 23.188285201888963 18 21.942502201121048 26.060480704231935 28.719102085260058 23.27791500938696 19 22.719927852363618 26.541200785825968 28.777983559151316 21.960887802659094 20 23.532222747902495 25.619464012166198 28.699131518072175 22.149181721859133 21 23.718614708322733 26.11952067468818 27.586644128455124 22.57522048853396 22 23.517244822511586 26.063888380379076 27.744189714048424 22.674677083060917 23 22.88365480399126 26.322792519279126 27.905697713766298 22.887854962963317 24 23.05475184589062 26.672911431327005 27.873364414509727 22.39897230827265 25 23.08399446213002 26.283881612575748 27.911799831518152 22.720324093776078 26 22.798145907182825 26.715626255589974 27.876772090656864 22.60945574657033 27 23.081775510220254 26.323822746951514 27.574202148103943 23.020199594724282 28 22.5890096896875 26.48818368483909 28.27927411743169 22.64353250804172 29 22.160197233125466 26.96486210402605 28.290289628698023 22.584651034150465 30 22.207429209490456 27.48457234060595 28.185919640656586 22.122078809247007 31 22.613259664129927 27.17344358354394 27.677858901602953 22.53543785072318 32 21.844234330831465 27.00741843172404 28.074338058908417 23.074009178536077 33 22.025871394302207 26.661024188953263 28.41177724575764 22.90132717098689 34 22.530603705491192 26.353144611473407 28.22776273381215 22.888488949223248 35 22.313938901159165 26.530898509102062 28.54649932599336 22.608663263745417 36 22.00368187520456 26.779500371278203 28.21429052578858 23.002527227728656 37 22.55675563871342 25.909671222650427 28.23006093400441 23.303512204631748 38 21.976658210874923 25.99090071220431 28.98474232817189 23.047698748748868 39 21.97261654846785 25.905629560243355 29.02531744880759 23.0964364424812 40 21.37373727767885 25.698236804962843 29.745842833221197 23.182183084137108 41 20.980824293085508 25.899368945926522 29.969402238129994 23.15040452285798 42 21.39814574868626 25.65789942917462 29.71929465858651 23.224660163552606 43 20.791262401365607 25.504474754270888 29.807735741847136 23.89652710251637 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 391.0 1 352.0 2 313.0 3 737.5 4 1162.0 5 1162.0 6 1636.0 7 2110.0 8 2099.0 9 2088.0 10 3063.5 11 4039.0 12 4039.0 13 6815.0 14 9591.0 15 12836.0 16 16081.0 17 15827.5 18 15574.0 19 15574.0 20 17475.0 21 19376.0 22 18817.0 23 18258.0 24 20446.0 25 22634.0 26 22634.0 27 25608.0 28 28582.0 29 34000.5 30 39419.0 31 43088.0 32 46757.0 33 46757.0 34 50470.0 35 54183.0 36 57668.5 37 61154.0 38 65920.0 39 70686.0 40 70686.0 41 73922.0 42 77158.0 43 76050.5 44 74943.0 45 76703.5 46 78464.0 47 78464.0 48 79928.5 49 81393.0 50 82074.0 51 82755.0 52 85302.0 53 87849.0 54 87849.0 55 83041.5 56 78234.0 57 73807.0 58 69380.0 59 63520.5 60 57661.0 61 57661.0 62 52754.0 63 47847.0 64 42042.0 65 36237.0 66 31317.0 67 26397.0 68 26397.0 69 22520.0 70 18643.0 71 15942.0 72 13241.0 73 10652.0 74 8063.0 75 8063.0 76 6306.0 77 4549.0 78 3770.5 79 2992.0 80 2316.0 81 1640.0 82 1640.0 83 1237.0 84 834.0 85 694.0 86 554.0 87 476.0 88 398.0 89 398.0 90 294.5 91 191.0 92 109.0 93 27.0 94 16.0 95 5.0 96 5.0 97 4.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1261857.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.49063319094866 #Duplication Level Percentage of deduplicated Percentage of total 1 88.63503512040384 58.93399608057624 2 7.386489449390416 9.822647210964607 3 1.7123631371169554 3.415683277192368 4 0.6286847681830422 1.67206593255981 5 0.34900281459538984 1.1602709063935364 6 0.21069506310683636 0.8405548893708262 7 0.14779177383598363 0.687873803593762 8 0.10965596634791334 0.5832875708510492 9 0.08391995368282106 0.502190177195327 >10 0.5711487151929516 7.634452116739013 >50 0.09691276535748619 4.595949618297853 >100 0.06579732340081876 7.7057667372592995 >500 0.0020263590263871058 0.8637235204942714 >1k 2.3839517957495362E-4 0.6552822598134185 >5k 2.3839517957495362E-4 0.9262558986985272 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5872 0.46534591479066173 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5815 0.46082876268864065 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4845 0.38395792867179085 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3423 0.2712668709687389 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 7.92482824915977E-5 0.0 2 0.0 7.92482824915977E-5 0.0 0.0013472208023571608 0.0 3 0.0 7.92482824915977E-5 0.0 0.0020604553447815402 0.0 4 0.0 7.92482824915977E-5 0.0 0.002852938169697517 0.0 5 0.0 1.584965649831954E-4 0.0 0.002932186452189115 0.0 6 0.0 1.584965649831954E-4 0.0 0.002932186452189115 0.0 7 0.0 1.584965649831954E-4 0.0 0.0033284278646471036 0.0 8 0.0 1.584965649831954E-4 0.0 0.0035661727121218964 0.0 9 0.0 1.584965649831954E-4 0.0 0.006181366034344621 0.0 10 0.0 1.584965649831954E-4 0.0 0.0103022767239077 0.0 11 0.0 1.584965649831954E-4 0.0 0.011887242373739655 0.0 12 0.0 1.584965649831954E-4 0.0 0.01347220802357161 0.0 13 0.0 2.377448474747931E-4 0.0 0.01418544256599599 0.0 14 0.0 2.377448474747931E-4 0.0 0.015611911650844747 0.0 15 0.0 2.377448474747931E-4 0.0 0.018147856690575875 0.0 16 0.0 2.377448474747931E-4 0.0 0.02131778799023978 0.0 17 0.0 2.377448474747931E-4 0.0 0.02591418837475245 0.0 18 0.0 2.377448474747931E-4 0.0 0.028053892002025585 0.0 19 0.0 2.377448474747931E-4 0.0 0.03058983704175671 0.0 20 0.0 2.377448474747931E-4 0.0 0.03288803723401305 0.0 21 0.0 2.377448474747931E-4 0.0 0.038435417008424885 0.0 22 0.0 2.377448474747931E-4 0.0 0.0481829557548914 0.0 23 0.0 3.169931299663908E-4 0.0 0.05991170156364786 0.0 24 0.0 3.169931299663908E-4 0.0 0.08083324814142966 0.0 25 0.0 3.169931299663908E-4 0.0 0.08693536589328268 0.0 26 0.0 3.169931299663908E-4 0.0 0.09715839433469878 0.0 27 0.0 3.169931299663908E-4 0.0 0.11498925789530827 0.0 28 0.0 4.754896949495862E-4 0.0 0.15302843349127515 0.0 29 0.0 5.547379774411839E-4 0.0 0.20873997608286834 0.0 30 0.0 5.547379774411839E-4 0.0 0.2982112870158822 0.0 31 0.0 5.547379774411839E-4 0.0 0.6108457614452351 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTTCGT 40 0.0019312911 23.125002 8 ATACCGT 160 0.0 19.65625 6 TACCGTC 155 1.8189894E-12 19.096773 7 GGTATCA 2825 0.0 18.40177 1 TCGGTGA 145 1.546141E-10 17.86207 13 CGGTGAT 145 2.9795046E-9 16.586208 14 CCAATAC 135 2.2197128E-8 16.444445 3 AGTCGGT 160 6.2937033E-10 16.1875 11 ACACCGT 70 0.0025926817 15.857143 6 GTAATAC 140 3.473542E-8 15.857143 3 GTCGTAG 175 1.3096724E-10 15.857143 11 CGTCGTA 175 1.3096724E-10 15.857143 10 ACCGTCG 175 1.3096724E-10 15.857143 8 GTCCTAC 155 7.208655E-9 15.516129 1 CGGACAT 275 0.0 15.472727 21 CGAACTA 85 5.3646695E-4 15.235293 29 GCGCAAG 170 1.4861143E-9 15.235293 1 TGCGGTA 110 1.4520132E-5 15.136364 23 TCTATGC 110 1.4520132E-5 15.136364 3 CATATAC 160 1.0964868E-8 15.031251 3 >>END_MODULE